Lsal022619.2
Basic Information
- Insect
- Leucoma salicis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_948253155.1
- Location
- OX411809.1:26262599-26287752[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.7e-75 4.1e-71 240.5 19.7 1 277 121 389 121 404 0.89 2 6 0.0057 87 3.0 7.4 1 61 405 464 405 475 0.77 3 6 0.49 7.4e+03 -3.3 6.9 10 59 600 648 592 660 0.69 4 6 0.51 7.7e+03 -3.4 7.1 10 60 739 788 730 800 0.70 5 6 2 3e+04 -5.9 12.9 11 173 879 943 873 966 0.51 6 6 2 3e+04 -21.4 35.7 3 167 973 1145 971 1152 0.66
Sequence Information
- Coding Sequence
- ATGGGGCACCAATCTGAAGTGGCCACACCTCAAAGCAGCGACGACGAAAGCGGGGATGCTTTTACAGATGGCGATTTCGGTGATTCCGATGAGGAAGTAATTGAAAGAAACGATGATATAAAAGTGACTCATATACCTGTAACTGAAGCGAAGAACGAGGAAATTCAGAAAATGAACGGTACAATCAATGGACACTCTAATGAATTTGCGGAGGAGGAACCCCGGGTCAATGGTGCAAACGTTGGCGAGGGACATTCAAGTGATACAGAAATCCAAAGTTTTGTACTTTCGGATTTACGTAGAGACTCTCACGACCAAAATCCTTCTATAGTCGGCATACTTGGCGGACAGCAAAACCATGCAGAGCAGCGGCTTGCAGCGCGGCGGGCGGCTCGGGCAGAAGCACGAGAGATACGTATGAGAGAATTGGAGAGACAGCAGCGAGAACAGGAGGACCATGCTGATAAAGCATATGATATGTATGCCGAGACTGTGGGTCGGCGCGACCGCACGCGGCTGGCGGCTTTGAGCCCCGCCGGCTCAGTACATTCACCGCGACGCAGTTCTGAGGATTCCGTCGATGATGTGTTCAGCATCAAAGATCTTAGACATGAGTTGAAAGAAGTAGAAGAGAAATTCCGCAAGGCGATGATCTTAAACGCTCAGTTGGACAACGATAAGGCGGCTCTTGGCTACCAGCTGGAACTGCTCAAGGACCGGATAGAGGAACTGCACGAGGAGTATGCCCAGTTACAGCGGGAGCACAAGGAGAAGTGCTCGTCGCTGGAGCGCGTGCGGCGCGAGCACGCGGGCGCGTCGCGCGAGCTGGCGGGCGCGCGGGACGCGGTGCGCGCGCGCGACGGCGCCGCGGCCGCCGCCGGCTTCGCCTTCGTGGACGCCGCCGCCCTGCCGCCCGCCGCGCCCGCCTCGCCCGCCGTGGGCCGCGTGCCGCCGCTCGCGCTCGTGTCGCACGGCGCCGAGCAGCTGCTGCGCGACGCGGGCGAGGGCACGCTCGATGTGCGATTGCAAAACCTACTGAGTTCCAAACAATCCCTGGAATCGGAAGTAAGAAAGTTGAAACTACAACTGAACGAGGAGCGCGCTGCCAGACAAAATGGTGTCGCCAACCATCACGACCAAGAATATGAAAATGAATTGGAGGTGGCGCGTAAGAGCGCAACGGAGGCAAAGGGACGAGCGGCGCGCGCGGAGGCGGAGGCGGCGCTACACGCGGCGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACGCACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACACGCACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACGCACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACGCACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACGCACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACGCACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACGCACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACGCACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACGCACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACACACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACACACACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCTGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACACACACGCACGTGGCGCGGCTGGCGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACTACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGTACGTCACGGCACACACACACACACACACGCACGTGGCGCGGCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGGGAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCAAGCTGCAGCGCGAGGCAAGGGAAGCGTTGAATCGTGTGGAAGAATTGGAAACGGAAAACAGCCATCTAACAAAACGCCTGGACAAACTCAAGAACGCCAAATCCGCGCTCCTGAAGGACCTGTGA
- Protein Sequence
- MGHQSEVATPQSSDDESGDAFTDGDFGDSDEEVIERNDDIKVTHIPVTEAKNEEIQKMNGTINGHSNEFAEEEPRVNGANVGEGHSSDTEIQSFVLSDLRRDSHDQNPSIVGILGGQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRDRTRLAALSPAGSVHSPRRSSEDSVDDVFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSLERVRREHAGASRELAGARDAVRARDGAAAAAGFAFVDAAALPPAAPASPAVGRVPPLALVSHGAEQLLRDAGEGTLDVRLQNLLSSKQSLESEVRKLKLQLNEERAARQNGVANHHDQEYENELEVARKSATEAKGRAARAEAEAALHAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRHGTHTHTHARGAAGGAAGEAARAPGPPGRARGAAQAGAAQAAAGGTSRHTHTHTHARGAAGGAAGEAARAPGPPGRARGAAQAGAAQAAAGGTSRHTHTHARTWRGWRRSWRGCARARTTRTSTRSSSSRSGASCSGRYVTAHTHTRTHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRHGTHTHTHARGAAGGAAGEAARAPGPPGRARGAAQAGAAQAAAGGTSRHTHTHARTWRGWRRSWRGCARARTTRTSTRSSSSRSGASCSGRYVTAHTHTRTHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRHGTHTHTHARGAAGGAAGEAARAPGPPGRARGAAQAGAAQAAAGGTSRHTHTHARTWRGWRRSWRGCARARTTRTSTRSSSSRSGASCSGRYVTAHTHTHTHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVRHGTHTHTHTHVARLEAQLARLRARLDHQDEHEEQLKQERRKLQREVRHGTHTHTHTHVARLAAQLARLRARQDHQDEHEEQLKQERRKLQREVRHGTHTHTRTWRGWRRSWRGCARARTTRTSTRSSSSRSGASCSGRYVTAHTHTHTHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -