Lsal009602.1
Basic Information
- Insect
- Leucoma salicis
- Gene Symbol
- -
- Assembly
- GCA_948253155.1
- Location
- OX411803.1:2213633-2214277[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-16 1.7e-13 50.8 0.0 1 42 96 138 96 141 0.94
Sequence Information
- Coding Sequence
- ATGAACCACGTACATTTATCTCTCTTCCCAGGAGGCCAGTGGACTATGATGGAGCATTCGTACCCTCGGTATTCAAACGCTTGCATCGGAGGATCGCTGCAGCCAGACCATGGCATGTACATGAATAACGTTATCAATCCTCACATGGATGCCGATATCTCTAACTACGGCCAATCGCTTGGAGTGCCGGGGCCTTCCCCTGGGCCGTCCTGCGTTGACGTTCAGACCCAGCAGGAACAAACACCCATTGCAGTACCGAAACGACGACGTACCACCAATCCGCAGTCGGAAGAGAACTTCCAGCGTGCGCTCGAAGCAGTACGATTCGGTGGCATCGGTTTCTGCAAAGCAGCGAGAATGTTCGGCGTTAACAATAGAACCCTGTGGCTCGAATATAAAAAGAAAGGCTATCCGAATAATCGGCCAAGCATCAAGAGCAGAATCAAAAGAGAACACACCACTCCCCCGCCAGAACAGAAAGATGAACACCAGCAAGCCGACCAACAGATGGCGTTACTGTGCCCCCAGCACCAAGTCCCGCCAGGTTTCATCGATTCTACAACTACCCACGGGTTCCCTCTCCAAGGAGTCCCACACAACTCCCCTCTTAATATTTTAGGGGTGAATTTTAATTCGATGCAATAG
- Protein Sequence
- MNHVHLSLFPGGQWTMMEHSYPRYSNACIGGSLQPDHGMYMNNVINPHMDADISNYGQSLGVPGPSPGPSCVDVQTQQEQTPIAVPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEQKDEHQQADQQMALLCPQHQVPPGFIDSTTTHGFPLQGVPHNSPLNILGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425865;
- 90% Identity
- iTF_00637419;
- 80% Identity
- -