Egri002871.1
Basic Information
- Insect
- Eilema griseolum
- Gene Symbol
- -
- Assembly
- GCA_963662185.1
- Location
- OY759229.1:47090846-47091445[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-15 2.5e-13 50.9 0.0 1 42 81 123 81 126 0.94
Sequence Information
- Coding Sequence
- ATGATGGAGCATTCATACCCGCGTTACTCGAACGCCTGCATCGGAGGGGCGCTACAGCCGGACCCGGGCATGTACATCAATAACGTCATCAACCCTCACATGGAGGCCGATATCGCCAACTACGGCCAGTCCCTAGGAGTGCCGGGCCCCTCGCCGGGACCCTCCTGCGTCGACATTCAAGCGCCTCAAGAACAAAACCCGATGCCCACACCTAAGCGGAGACGCACAACCAATCCACAGTCAGAGGAAAACTTTCAACGAGCGCTCGAAGCCGTGCGCTTTGGAGGCATCGGCTTTTGTAAAGCGGCGCGAATGTTCGGTGTCAACAACAGGACGCTCTGGCTGGAGTACAAGAAGAAAGGTTACCCCAACAATCGACCGAGCATTAAGAGCAGGATTAAGAGGGAACACACGACGCCCCCTCCCGAGGTCAAAGAGGATCCGCAACTGCCCGACCAACAGATGGCGCTGCTATGTCCCCAGCACCAAGTGCCGCCAGGCTTCATCGATTCGACTTCTACGCACGGTTTCCCCCTCCAGGGCGTCCCGCACAATTCACCTCTCAACATTTTGGGGGTGAATTTTAACTCGATGCAATAG
- Protein Sequence
- MMEHSYPRYSNACIGGALQPDPGMYINNVINPHMEADIANYGQSLGVPGPSPGPSCVDIQAPQEQNPMPTPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEVKEDPQLPDQQMALLCPQHQVPPGFIDSTSTHGFPLQGVPHNSPLNILGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425865;
- 90% Identity
- iTF_00889103;
- 80% Identity
- -