Lsal023511.1
Basic Information
- Insect
- Leucoma salicis
- Gene Symbol
- SLMAP
- Assembly
- GCA_948253155.1
- Location
- OX411813.1:17733673-17770075[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.15 1.2e+03 0.1 0.0 2 35 286 319 285 322 0.91 2 10 0.033 2.5e+02 2.2 0.1 2 35 366 399 365 425 0.90 3 10 0.029 2.2e+02 2.4 0.0 2 35 436 469 435 471 0.92 4 10 0.026 1.9e+02 2.6 0.0 2 35 479 512 478 514 0.92 5 10 0.026 1.9e+02 2.6 0.0 2 35 522 555 521 557 0.92 6 10 0.031 2.4e+02 2.3 0.0 2 35 565 598 564 600 0.92 7 10 0.026 1.9e+02 2.6 0.0 2 35 608 641 607 643 0.92 8 10 0.031 2.4e+02 2.3 0.0 2 35 651 684 650 686 0.92 9 10 0.026 1.9e+02 2.6 0.0 2 35 694 727 693 729 0.92 10 10 0.029 2.2e+02 2.4 0.0 2 35 737 770 736 774 0.92
Sequence Information
- Coding Sequence
- ATGGTGATAGCAAAGAGCAAAAAAGTTAAACCAATAATGAATAATACTATCAAAAATATGGATTACAACTGGACACCTGGCCCAGAACCACCTATTAATCAGGAAGGCGGAGTTCCTAGGGCGATCTTCATTCCTCATTCAAACTCCCTGACGTTCGATGAGAGACGTGTAACATTGGAGCAACCAGTCAAGATTGGTCGGAACGTTTACCGAGCTACACCAAGCCCAACGAACACAATATTTGAGTGCAGAGTGCTGTCTCGTCACCACGCTACACTCTATTATGACAAGGGTCACTTTTATCTTGTGGACAACCGAAGCAGCAATGGCACGTTTATTAATAACAACCGCTGCTCCATATCAAAGGAACAAGAGCCACACGAAGTATTCTCCGGTGACATAGTGCAGTTTGGCATACCGGTTGTAGAGAATGACAGTAACTCTGGAAAGCACACGTTCCCGCCAGTTGTTGCTGTGCTTAAGCTTTATCACCCTGATGGCAAGGAGGCCAAGCTATCTTTTAATCCCACCATGACCACACCGCTGCATCTCAAGGAGCTATATCAACTCAATAATTTTGTTCAGGAAGCAGTTCAACGTGAGGCGTCACTAGAAACTCGTTTGCGCACGTTGCGCGAATGTGTGGAAAGAACGCGGGCCGAAGCGGCTGCCTCGTGGGAACTGTTTGTGGGCGAACAGCGACTACTGATGCGAGTACAGACGTTAGAGGCGATGCTTGCACTGGGCAAACAACCTGATCACCAACATCTCGCACAGCTCCTTAACGACAAGAGGAACTACCAGGAAGTGGCGCAGGAAAGTCTGCGAGTGGCGCACGAACAGCGGCTGGCGCTGGAGGAGTCGCTGGAGCGGCGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCGCCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTGGAGGATCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCACCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTTGAGGAGTCGCTGGGGCGGTGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCACCAACAACGCGCTCGCCGAGCTGCAGTGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCACCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTGGAGGAGTCGCTGGGGCAGTGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCACCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTGGAGGAGTCGCTGGGGCGGTGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCACCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTGGAGGAGTCGCTGGGGCGGTGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCACCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTGGAGGAGTCGCTGGGGCGGTGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCGCCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTGGAGGAGTCGCTGGGGCGGTGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCACCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTGGAGGAGTCGCTGGGGCGGTGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCGCCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTTGAGGAGTCGCTGGGGCGGTGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCACCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTGGAGGAGTCGCTGGGGCGGTGCAGTCGCGAGGTGGCGGCGCTGCACCACCACAACTACACGCTGCGCCTCACCGCCAACAACGCGCTCGCCGAGCTGCAGGTAGGCACCGGCGACTGGCAGGGGGCGCTGGAGGAGTCGCTGGAGCGGCTCCCGTTCGCAAAGCTGGCGGCGCGCTGCGAGCGCAAGATGTGCGCGGCGCGGCTCGCCATCGCGGCGGCCGAGGAGCGCGAGCTCGCCGTGCGCGCGCGCCTGCCGCTCGCCTATTCAGTACAAAATGGTGAAGCAAAGATGTTGGTGGTGAGCACAGACAGTAATAAACTAGCAGACGCCAAACGAGGCGGCTCACTCGAAGATGCTGTGCGCGCGTTACCGGACTACATCAAAATGTTGCTGCCTCAACAATTACTCAACAAGGTTGGCATTAAAACCATATCTGCCGAAGGGAAATCTGCCAAGGAGTTCGAATTAATATTGAAAACGAATAATGTTTACAATTCAGAAAGCAAAGAAAAACAGAATGCGGGAGATGGCGAGGAGAGTGGTAGTGTGGAGGAGAAGACTGGCGAATCTGACACTTGTACTGACGACGAGAAACAGTCGCGACTCAACCATGAATCATTTAAACAGTATGATAAATCAGTGCGAGTCATTTTAGATGGCACTGAGGTTCCAGTTCAAAAACCAGGCAATACAACAAGCTCAACAAGCTTCATGGAGCACATACAAACACACTAA
- Protein Sequence
- MVIAKSKKVKPIMNNTIKNMDYNWTPGPEPPINQEGGVPRAIFIPHSNSLTFDERRVTLEQPVKIGRNVYRATPSPTNTIFECRVLSRHHATLYYDKGHFYLVDNRSSNGTFINNNRCSISKEQEPHEVFSGDIVQFGIPVVENDSNSGKHTFPPVVAVLKLYHPDGKEAKLSFNPTMTTPLHLKELYQLNNFVQEAVQREASLETRLRTLRECVERTRAEAAASWELFVGEQRLLMRVQTLEAMLALGKQPDHQHLAQLLNDKRNYQEVAQESLRVAHEQRLALEESLERRSREVAALHHHNYTLRLTANNALAELQVGTGDWQGALEDREVAALHHHNYTLRLTTNNALAELQVGTGDWQGALEESLGRCSREVAALHHHNYTLRLTTNNALAELQCSREVAALHHHNYTLRLTTNNALAELQVGTGDWQGALEESLGQCSREVAALHHHNYTLRLTTNNALAELQVGTGDWQGALEESLGRCSREVAALHHHNYTLRLTTNNALAELQVGTGDWQGALEESLGRCSREVAALHHHNYTLRLTTNNALAELQVGTGDWQGALEESLGRCSREVAALHHHNYTLRLTANNALAELQVGTGDWQGALEESLGRCSREVAALHHHNYTLRLTTNNALAELQVGTGDWQGALEESLGRCSREVAALHHHNYTLRLTANNALAELQVGTGDWQGALEESLGRCSREVAALHHHNYTLRLTTNNALAELQVGTGDWQGALEESLGRCSREVAALHHHNYTLRLTANNALAELQVGTGDWQGALEESLERLPFAKLAARCERKMCAARLAIAAAEERELAVRARLPLAYSVQNGEAKMLVVSTDSNKLADAKRGGSLEDAVRALPDYIKMLLPQQLLNKVGIKTISAEGKSAKEFELILKTNNVYNSESKEKQNAGDGEESGSVEEKTGESDTCTDDEKQSRLNHESFKQYDKSVRVILDGTEVPVQKPGNTTSSTSFMEHIQTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -