Basic Information

Insect: Leucania comma
Gene Symbol: Kr
Assembly: GCA_958295575.1
Location: OY282490.1:726517-751325[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 4.3e-05 0.0046 18.5 4.4 1 23 284 306 284 306 0.98

2 10 0.72 77 5.2 0.1 1 23 339 362 339 362 0.97

3 10 0.14 15 7.4 7.3 1 23 369 391 369 392 0.96

4 10 1.8e-06 0.00019 22.8 0.4 2 23 398 419 398 419 0.98

5 10 4.6e-05 0.0049 18.4 4.7 1 23 425 447 425 447 0.99

6 10 0.00039 0.042 15.5 1.8 1 22 453 474 453 478 0.93

7 10 0.019 2 10.2 0.1 1 23 486 509 486 509 0.96

8 10 0.006 0.65 11.7 0.3 1 23 515 538 515 538 0.92

9 10 3.9e-06 0.00042 21.8 1.0 1 23 547 569 547 569 0.98

10 10 2.1e-05 0.0022 19.5 0.4 1 23 575 598 575 598 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	4.3e-05	0.0046	18.5	4.4	1	23	284	306	284	306	0.98
2	10	0.72	77	5.2	0.1	1	23	339	362	339	362	0.97
3	10	0.14	15	7.4	7.3	1	23	369	391	369	392	0.96
4	10	1.8e-06	0.00019	22.8	0.4	2	23	398	419	398	419	0.98
5	10	4.6e-05	0.0049	18.4	4.7	1	23	425	447	425	447	0.99
6	10	0.00039	0.042	15.5	1.8	1	22	453	474	453	478	0.93
7	10	0.019	2	10.2	0.1	1	23	486	509	486	509	0.96
8	10	0.006	0.65	11.7	0.3	1	23	515	538	515	538	0.92
9	10	3.9e-06	0.00042	21.8	1.0	1	23	547	569	547	569	0.98
10	10	2.1e-05	0.0022	19.5	0.4	1	23	575	598	575	598	0.96

Sequence Information

Coding Sequence: atggaaacaaTGAGTTTACACCACGAGGAGGACATTAAGTTTGATTTTGAGCCGGAAAAAGCCATTTGTAGGTGTTGTTTGACGACGGACAGAAGAATGTTTAGCGCTGTTACATTCGAAGCGTTTTTTAAAGATCTTGCCGATATTGAAGTGTCGGAGTCAGATGGATTGCCGCAATGGCTGTGCTACGAGTGCGCCACCTTCCTCCAGAAGTCAGTGAGGTTCAAGCACAAAGTGTTGAGAGCACACACAATGCTGTACGAGTACCTCACACGATGTGCCCCTTTTCCCATCGAGCCCCAAGATGAGGAGTTGTCGAAGTACGCCAGCCCTCACTTGAGTACCACCAGCGTACTAACTATAGACATTGTGGGCAGAGGGAAGGCGGGCTACCAACAGGTTCTAGAGCACGAAAAGCAAGTCCAGCCTTCAGGGTTGGATGATATAGACATCCAGGTCATCAACAAGATGGAAGACGACATCGTGAAGGAGGAGCATGGCTTCTCAGATTATGAGGATAATATCACTTTGGAAGAATTCAGATCCGTAGCAACGAAAATAACAGAGGACGACATTGCATCCTTACTGCAAGAAACTGGGCATGTGGAAATAAAGGAAGAACTACCCACGAAGAAGAGAAAGACGAAGAATAAAgaagtaaaaactaaaaagaagaagatagaCGTTGAGACAACTCCTGACATTGAAAACGACAGTCAGACGGAAACCAAGTCTTCAATAAGGAAACCTGTCGAACTGGACCCCACCAAGATCAGAATAGTGACCCTTAATCCTGAGGAGCAGATCAAACAGCGAGAGGAGGAGAGTAAGGCCGGCTTGAAGTTCCCGTTCCAATGTAATTTGTGCCATAAAGGGTTCAACTTTGAGTCGAAATTACAAAATCATATGAGCAAGCACAGCCCGTCCCGAGGTTCGTACGAGTGCAAGCTGTGCTGCATGTACCTGCCGACCTCGTACAGCTTCAACGTGCACTCGCTCATCCACCTGCGGCGCTACGAGTGCGTCGCGTGCGGGCGCCGCATGGTCGACCGCCCCTCCATCATAGACCATTACAGaactCAACACGAAGGTTTCCAAACTATATTTACGTGCCATCTTTGTGGGAAAGTCTCAAATAACAACAAAACCCACCGGGGCCACATGAGGAACCACCACAGCGGAGACAGGCCTAAGTGCGAGCAGTGCGGCAAGACCTTCATCAACAAGGATTCCTTGGTGGAACACCAGCAAATCCACCAGGGCATCAAGAACTACGAGTGTTCGATCTGCAGCAAGCGGTTCAGGACGCGGACGCAGATCAAACACCACCAGCTCACGCACACCGACGTCAAGGATTACTACTGCGTGGAGTGCGACGTCAGGTTCAAGTCGGCTCACAGTCTCAGACAACATCTTCAGAAGAGTTTGAAACATCGAGACAAGCAGAGCTTGAAGTACCCGTGCACGCGCTGCCCGTCGCGCTTCCCGGTGGCGCGCGCGCTGCGCGAGCACGTGCAGGTGCAGCACGAGGGCGTGCGCGCGCACGTGTGCGGCGAGTGCGGCGCCGCGCTGGCGTCGCGCTCCTCGCTCAGCAAGCACACGCACGCCGTGCACCGCGGCCTGCGCCCCGCCCGCCGCCACGTCTGCGACACCTGCGGGAAGGCCTTCCGGGGTAAGAGCGTGTTGACGAACCACGTGCGCACGCACACGGGCGAGAAGCCGTTCGAGTGCGGCGACTGCGGGCGCCGCTTCACGCAGCGCACCGCCATGCGCACGCACGTCAAGCTCGTGCACCTCAAGCTGCGCCGCACGCACAAGATCAAGCCGGAGCCGCCGCTGGAGGCGCTGGCGCCGAAGCTGGAGGAGCTGAAGCCGGCGCCGCCCGAGCCCTGGCGCGCGCCCTGCGACGTGTACTTCCGCGTCACGGCCGGCTACTga
Protein Sequence: METMSLHHEEDIKFDFEPEKAICRCCLTTDRRMFSAVTFEAFFKDLADIEVSESDGLPQWLCYECATFLQKSVRFKHKVLRAHTMLYEYLTRCAPFPIEPQDEELSKYASPHLSTTSVLTIDIVGRGKAGYQQVLEHEKQVQPSGLDDIDIQVINKMEDDIVKEEHGFSDYEDNITLEEFRSVATKITEDDIASLLQETGHVEIKEELPTKKRKTKNKEVKTKKKKIDVETTPDIENDSQTETKSSIRKPVELDPTKIRIVTLNPEEQIKQREEESKAGLKFPFQCNLCHKGFNFESKLQNHMSKHSPSRGSYECKLCCMYLPTSYSFNVHSLIHLRRYECVACGRRMVDRPSIIDHYRTQHEGFQTIFTCHLCGKVSNNNKTHRGHMRNHHSGDRPKCEQCGKTFINKDSLVEHQQIHQGIKNYECSICSKRFRTRTQIKHHQLTHTDVKDYYCVECDVRFKSAHSLRQHLQKSLKHRDKQSLKYPCTRCPSRFPVARALREHVQVQHEGVRAHVCGECGAALASRSSLSKHTHAVHRGLRPARRHVCDTCGKAFRGKSVLTNHVRTHTGEKPFECGDCGRRFTQRTAMRTHVKLVHLKLRRTHKIKPEPPLEALAPKLEELKPAPPEPWRAPCDVYFRVTAGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01533326;
90% Identity: -
80% Identity: -