Basic Information

Insect: Leucania comma
Gene Symbol: -
Assembly: GCA_958295575.1
Location: OY282490.1:4419298-4421640[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.022 18 6.6 2.6 18 43 9 31 6 32 0.94

2 18 0.14 1.2e+02 4.0 0.3 17 44 36 60 32 60 0.80

3 18 0.0028 2.3 9.5 0.2 18 43 68 90 67 91 0.87

4 18 0.00029 0.24 12.6 1.2 17 44 98 122 95 122 0.91

5 18 0.00087 0.71 11.1 1.2 18 44 129 152 127 152 0.94

6 18 0.00011 0.088 14.0 1.2 15 43 157 182 153 183 0.89

7 18 0.006 4.9 8.4 0.3 17 44 188 212 184 212 0.89

8 18 0.00025 0.2 12.8 0.6 16 44 218 243 213 243 0.87

9 18 0.031 25 6.2 0.1 13 44 250 278 245 278 0.86

10 18 2.3 1.9e+03 0.2 0.5 19 43 304 325 298 326 0.76

11 18 5.4 4.4e+03 -1.0 1.4 17 31 332 351 323 356 0.72

12 18 1.4 1.1e+03 0.9 0.2 15 27 359 371 355 385 0.80

13 18 0.15 1.2e+02 3.9 3.2 17 43 406 429 398 430 0.89

14 18 0.0045 3.7 8.8 3.5 6 43 453 487 447 488 0.83

15 18 0.13 1.1e+02 4.1 0.8 17 44 493 517 489 517 0.85

16 18 0.87 7e+02 1.5 0.8 18 28 524 534 519 547 0.82

17 18 2.8 2.2e+03 -0.1 0.8 19 43 555 576 549 577 0.76

18 18 0.00026 0.21 12.8 2.0 6 43 606 642 605 643 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.022	18	6.6	2.6	18	43	9	31	6	32	0.94
2	18	0.14	1.2e+02	4.0	0.3	17	44	36	60	32	60	0.80
3	18	0.0028	2.3	9.5	0.2	18	43	68	90	67	91	0.87
4	18	0.00029	0.24	12.6	1.2	17	44	98	122	95	122	0.91
5	18	0.00087	0.71	11.1	1.2	18	44	129	152	127	152	0.94
6	18	0.00011	0.088	14.0	1.2	15	43	157	182	153	183	0.89
7	18	0.006	4.9	8.4	0.3	17	44	188	212	184	212	0.89
8	18	0.00025	0.2	12.8	0.6	16	44	218	243	213	243	0.87
9	18	0.031	25	6.2	0.1	13	44	250	278	245	278	0.86
10	18	2.3	1.9e+03	0.2	0.5	19	43	304	325	298	326	0.76
11	18	5.4	4.4e+03	-1.0	1.4	17	31	332	351	323	356	0.72
12	18	1.4	1.1e+03	0.9	0.2	15	27	359	371	355	385	0.80
13	18	0.15	1.2e+02	3.9	3.2	17	43	406	429	398	430	0.89
14	18	0.0045	3.7	8.8	3.5	6	43	453	487	447	488	0.83
15	18	0.13	1.1e+02	4.1	0.8	17	44	493	517	489	517	0.85
16	18	0.87	7e+02	1.5	0.8	18	28	524	534	519	547	0.82
17	18	2.8	2.2e+03	-0.1	0.8	19	43	555	576	549	577	0.76
18	18	0.00026	0.21	12.8	2.0	6	43	606	642	605	643	0.78

Sequence Information

Coding Sequence: ATGTATcaaaatcagttagatttcgtTTGCGACTACTGCTCGAGGACTTTCACAAGGAAATATAATTTGCAAACTCATATAGAGAACTGCCATATCAACTCTTCTTGTCACTGTGACATTTGTGGCCAGAATTTCGGCAGTCCGGCCGGGTTACTGCAACATCTCTCTCGAGGACACAATAACTATGGCCAGCCGTACCCAGAGTGTGAACTTTGCGGGCGAATCTTCACGCGGAAACAAAACATCACGTCCCATATGATAACGGTACATCTACAAGGTTTAGGATACgaaataaaatgtcaattgtGCGAAAAAACTTTCACAACAGAACGGAATTTGAAAAGACATATGAACCAGCTGCATAATCCTGATGTTGAATACCCAACGTGCAACGATTGTCACAAGGTTTTCAAAGGAAAACACTCCCTCATAGCCCATATTCAATCAGTTCACAATGTGAGCGAAAAAGATGCTATCAAGTGCCATTTGTGCGAAAAAGTTTACACTAACAACAGGAACTTGAAGAGACATATTGAAATGTTTCACGGTGAAAAGGGAGAGTTCAGATGTGATATTTGCCCGAAAGTGTACACTTCCAATCAAAGCTTGCGACGCCACGCGAGAACAAGACACAGTACAGACAACCAGGAAAATTTGACCTGTAACTTTTGTATGAAAATTATAAACGGGCGTGAGAACTTCGAAAGCCATATACAATTTCACCATCAAGACACCGAAATGGACGTCAAAAACACTGAATTTTCTTGCGAATCATGTGGTAAGAGCTTCGATGAAGAACCTTGCTTGCGGCAGCACGTCAAAACAGAACATTCGTTTAAAACATTCTATAAGTACTGCAGGAAATCGCTGCTTAAACAATACGGGATGGGCACGAGGATTATATACAACTGTGAATTCTGCAACAATTCTTTTCTAACTGTCTACGAGCTTAAAGATCATATGCGTGTGAACCATGACATTGATTACTCTCTAACAACTTGCAACGTCTGTTTCAACAAGTTTTACAGTAAAGAGACTATGTCTATCCACAGAACTGTGTGTTTACCGCCGGCCAACGTGAATTCTTGCAGTCACTGCGACAAACTCTTCACTGATATCACCAGTTTAGAGTTTCATACGCGAATTTTTCACCCACAAGCTCAAATAGCAGATTCCAATATATCGTCTACAAACATCGATGAGGAAGCCGTTTCATTCAAATGCGATCATTGTGACCGTATTTATTATAGTGACAGATCGCTTAAACACCATATCAAACTAAAGCACACGACTGACGAAGAAGTAGAATGCGAATTATGCGGCAAACTCTGCAGTAATAAGTACTACTTAGCGTCTCATGTTAAGATAGTCCATAACAATGATTCTTGGTCTCGATGTGAATACTGTGATAAGCAGTTTAAATCTAAAAGAAATATTAGAAGACATATTGAGTACACTCATTTGGGAATGCAACGATACAAGTGTATCGAGTGTGAGACGCTGTTTAAAGAAAAACGGAGCTTGAGAAAACACGTCAGAACGAAGCATCCGAACTCAGCTTCTTTCCCGCAATGCCATATCTGCCATAAACGGTTCGAATCGGCGAAGTCTTGCAAAATTCATTTGAAACTTTTACATTCGTTTAATATGAATACCTATCCGTGTCATCTTTGCTCCGTGTCTTTCAGTTCGAATGAGGCTTTGAGTATTCATTTGCAGACGAAACATTTAGCCGAAGACCAAATATACAAATGTGAGGAATGCAACTTAGTCTTTAGAGGTCAGGAGAAATTTGACGCTCACAACGATGTCTGTCACGTCAATTTGGTCCCAAGCATCAAACAGAAAGTCCTTCCAAGATGCATTCTCTGTATGAAAGATTTTAGTACAAGGAAAACTTTGAAGCGTCATATAAAGAAGTTCCATGATGCATTCGACGTGGATGAGTTGGCAACTTTCGGTTCTAGGCGCAGGACTTTCACGGTGGATTGCGAGGACTGTATCAAGAGCTTTAGTGACGATTTTCATTTGAACGTGTATCATAAACTGAAGCAATTTAAGGACTCGGTGATTTTCAAGTGCCCTTCTTGTTTTGAGGCTTACAACCCTTTAGAATTTGCGATCCAGAGGTATAAAGTCCTTAACGCCGATGCTTGTAAGACCAAAATGATCTTAAGTGAACTATGCACAACTGAAATGAGTGAGGAAGAAAATGATTTCTCTAACTTTGGGGCGTTGCATGATATGTTGCCTGAGAGTACGACAGACGATTTGCAGATCAAATTGGAACCTCTCGATGAAACTTTTGAGAGGGATATTAAAATGGAACCAGTTTCGCCGTGA
Protein Sequence: MYQNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCDICGQNFGSPAGLLQHLSRGHNNYGQPYPECELCGRIFTRKQNITSHMITVHLQGLGYEIKCQLCEKTFTTERNLKRHMNQLHNPDVEYPTCNDCHKVFKGKHSLIAHIQSVHNVSEKDAIKCHLCEKVYTNNRNLKRHIEMFHGEKGEFRCDICPKVYTSNQSLRRHARTRHSTDNQENLTCNFCMKIINGRENFESHIQFHHQDTEMDVKNTEFSCESCGKSFDEEPCLRQHVKTEHSFKTFYKYCRKSLLKQYGMGTRIIYNCEFCNNSFLTVYELKDHMRVNHDIDYSLTTCNVCFNKFYSKETMSIHRTVCLPPANVNSCSHCDKLFTDITSLEFHTRIFHPQAQIADSNISSTNIDEEAVSFKCDHCDRIYYSDRSLKHHIKLKHTTDEEVECELCGKLCSNKYYLASHVKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSASFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALSIHLQTKHLAEDQIYKCEECNLVFRGQEKFDAHNDVCHVNLVPSIKQKVLPRCILCMKDFSTRKTLKRHIKKFHDAFDVDELATFGSRRRTFTVDCEDCIKSFSDDFHLNVYHKLKQFKDSVIFKCPSCFEAYNPLEFAIQRYKVLNADACKTKMILSELCTTEMSEEENDFSNFGALHDMLPESTTDDLQIKLEPLDETFERDIKMEPVSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00447464;
90% Identity: iTF_01230865;
80% Identity: iTF_00888506;