Basic Information

Insect: Leucania comma
Gene Symbol: lrrfip2
Assembly: GCA_958295575.1
Location: OY282471.1:23746826-23779775[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.14 2.9e+03 -1.6 0.2 45 91 55 102 39 106 0.74

2 6 1.8e-79 3.7e-75 254.2 24.9 1 275 122 392 122 409 0.88

3 6 1.3 2.8e+04 -4.8 13.2 1 43 410 452 410 479 0.81

4 6 2 4.1e+04 -21.8 24.5 205 205 569 569 474 666 0.54

5 6 2 4.1e+04 -23.5 26.2 205 205 695 695 598 791 0.54

6 6 2 4.1e+04 -28.8 35.9 128 244 773 900 670 908 0.66

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.14	2.9e+03	-1.6	0.2	45	91	55	102	39	106	0.74
2	6	1.8e-79	3.7e-75	254.2	24.9	1	275	122	392	122	409	0.88
3	6	1.3	2.8e+04	-4.8	13.2	1	43	410	452	410	479	0.81
4	6	2	4.1e+04	-21.8	24.5	205	205	569	569	474	666	0.54
5	6	2	4.1e+04	-23.5	26.2	205	205	695	695	598	791	0.54
6	6	2	4.1e+04	-28.8	35.9	128	244	773	900	670	908	0.66

Sequence Information

Coding Sequence: ATGGGACAGCGCTCAGAGGTGGCCACGCCTGACAATAGTGACGAGGAGAGCGGAGACGCCTTCACTGACGGAGATTTTGGTGATTCCGATGACGAAACCATCGTGGAACGCCTTGATGAAGCTAAACCTGCTCACATACCGATCAATGAAGCTATAAAAGATGATATCCAGAAGAGTGCTGCTACTAATGGTCACTCTAATGGTAATATAGATGAGCAGCCCAGAATGAATGGCCGTAAGAATAGTGAAGCTCATTCGAGTGATATGGAAAACCAAAGCTTAGTGTTATCGGATTTGCGCCGAGATTCACACGGCGACCAGAATCCGTCAATCGTTGGCATTCTTGGCGACCAGCAGAACCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCGGCTCGGGCAGAGGCGCGAGAGATACGCATGCGCGAGCTTGAGAGACAGCAGCGCGAACAGGAGGACCATGCTGATAAGGCATACGATATGTATGCCGGCAAGACTCCAGAGACGGTGGGTCGTCGCGGGGCCTCGCGGCTGACGTCGCTCAGCCCGGCCGTGCACTCCCCGAGACGGAGCTCGGAAGACTCCGTTGATGATGGCTTCAGCATGAAAGACCTTAGGCACGAGTTGAAGGAGGTTGAAGAGAAGTTCCGCAAGGCGATGATCCTGAATGCCCAGTTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTGGAGCTCCTCAAGGACAGGATAGAGGAACTGCACGAGGAGTACGCGCAGCTGCAGCGTGAACACAGAGAAAAGTGCTCATCGTTCGAGCGGCTAAAGCGCGAGCACGAGTCCGTGAGCCGCGAGCTTAACGCGGCGCGCGACGCCGTGCGCGCGCgggacgccgccgccgccgccgccggcttCGCCTTCGTGGACGCCGCCGCGCTCGAGCCCGCGCAGCGTGACGCGGCCGGCGCCGGCGTGGGCGCCGTGCCCGCGCTCGCGCTGGTGACGCAACAGGCGCACCAGCTGCTCAACGACGCCGGGGAGGGCACACTCGACGTGCGGTTGCAGAAGCTTCTGAGCTCGAAGCAGGCGCTAGAGTCGGAGGTTCGCAAGTTGAAGCTGCAGCTCAACGAAGAACGCGCCGCGCGGCAGAACGGAGTCGCCAACCATCACGACCAAGAGTACGAGAATGAACTAGAAACAGTGCGTAAGGCAGTATCGGAAGCGAAGGGTCGGGCAGCACGGGCGGAGGCCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCTCGTCTTCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTTGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGTGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTTGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGTGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTTGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGTGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTTGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGTGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTTGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGTGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTTGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGTGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTTGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGTGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTTGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGTGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTTGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGTGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGTAAGCTTACCGTTGGTGGCGCAGGCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAACAGCTCAAGCAGGAGAGGCGCAAGCTGCAGAGAGAGGCTCGGGAAGCTCTCAACCGGGTTGAAGAGTTGGAGACTGAGAATAGCCACCTCACGAAACGACTCGACAAGCTCAAGAACGCGAAGTCTGCGCTCCTCAAGGACCTGTGA
Protein Sequence: MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPAHIPINEAIKDDIQKSAATNGHSNGNIDEQPRMNGRKNSEAHSSDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGASRLTSLSPAVHSPRRSSEDSVDDGFSMKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELNAARDAVRARDAAAAAAGFAFVDAAALEPAQRDAAGAGVGAVPALALVTQQAHQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYENELETVRKAVSEAKGRAARAEAEAALQAAHVARLEAQLARLRARQDHQDEHEEQLKQERRKLQREVSLPLVAQARRRCRRRMWRARQDHQDEHEEQLKQERRKLQREVSLPLVAQARRRCRRRMWRARQDHQDEHEEQLKQERRKLQREVSLPLVAQARRRCRRRMWRARQDHQDEHEEQLKQERRKLQREVSLPLVAQARRRCRRRMWRARQDHQDEHEEQLKQERRKLQREVSLPLVAQARRRCRRRMWRARQDHQDEHEEQLKQERRKLQREVSLPLVAQARRRCRRRMWRARQDHQDEHEEQLKQERRKLQREVSLPLVAQARRRCRRRMWRARQDHQDEHEEQLKQERRKLQREVSLPLVAQARRRCRRRMWRARQDHQDEHEEQLKQERRKLQREVSLPLVAQARRRCRRRMWRARQDHQDEHEEQLKQERRKLQREVSLPLVAQARRRCRRRMWRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -