Basic Information

Insect: Leucania comma
Gene Symbol: -
Assembly: GCA_958295575.1
Location: OY282475.1:22788251-22790824[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.4e-10 3.2e-07 31.1 0.0 2 40 21 58 20 61 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.4e-10	3.2e-07	31.1	0.0	2	40	21	58	20	61	0.92

Sequence Information

Coding Sequence: ATGACAGAGCAGGGAGATCCAGGTCCTTCACGGAAACAAAGAAAATTATGTGGTTACGATCGCACCAAAATAAAAGAAGCTCTTGAGGCAATAAATAACGGAATGCCCATTCGTGCAGCCTCTAAACTATTTAGCGTCCCACGAACGACTTTACAGGACAGATTGGCTGGTCGCATAGACATAGATGTTTTTAAATCTGGACGTCCTTCGGTTTTAAACCCATCCGAAGAAGAAGTATTAGTTAAATGGCTAATACAACTTGCCAAGTGCGGTTTTCCGAGaaagaaaacagatttaataaaTAGTGTTAAGAAAATAATGAAAGGTGAAAAGAGACCAAATCCTTTCAAAAATGATACTCCGGGCCAAAAATGGtatgaattatttatgaaaAGGCACCCTGTACTCAGTCAGCGAACGCCGGAGAGCATAAATACTGCAAGAGCAGTAGTCACAGAAGAATATATACGAAAATGGTTTTCAGAATTCTTAGAGTTCCTGACTAAAACAAACAACTTAGACATTCTGGAAGACCCAAACCGCATTCTAAATGGTGATGAGACTAGCTTTCAAATTTGTCCAAAAACAGGCAAGGTTATAGGACCAAAAGGCTGGAAAAATATCTACGAAGTGAAACGAGGCAGTGAAAAGGAAACTATCACTGTTATGATAGTCATCACAGCTGCTGGCGAACTTGTAGCCCCGATGGTAGTTTTTCCATATGTTAAAAAACCACCTAAAGAAGTTGCACTTAGTGTGCCGCCGACAATTATCTTGGGAATATCGGAAAGTGGCTGGATGAGAGGAGACCTTTTTTACGAATATATTGCTAACGGTGTCAACGCATGGCTCGAAGAAAATGAAGTAAAAAAACCTGTCGTTTTATTTGTTGACGGTCATAAATCCCATCTCACTTATCATTTAAGTGAATTTTGTGACGCAAATCAAATAATTCTGTACGCTTTACCACCAAATACTACGCACATCCTTCAGCCCGCTGATGTAAGTGTGTTTCGGCCTTTTAAGTCTGAATGGCGAAAAACTATTAAAGCCTGGCAGGATGAGCAGGGAAAACCCTTGAGTAAAGTAACGTTTTGTCCATTGTTGCAGAAGGTCTTAGACAAAGATATgtcacaaacaataaaaaatgggTTTGAAAGGTGCGGTCTTTACCCCTTTAATCCCAATGCAGTGGATTATTCCAAATGTGTTAAAAACACTTtggaaaatatggaaaaaataaatggaatatcAACGATTCCCTCGAGTCAAGACATTGAAACCACTGTAGAAGTATTAACGTATTATTGTAACGATCTGAAAGAAAAGGGTATAGTTATTGACgttgaaaaattaaaagatgCTTTAAATGAGCTAAGTAGTACAGCGACCGAAAAGCAATTTGTCCAATCGTCTCAGtttaacaaatatcaaaacaagGTTACATCAACACAACGTAATGAAGAGGTGCTAGTGATTAATTACCCAGAACAAGAAACCAACGCCTTCGCCATACCTCAGGACACCGGTGAAAACATAGACCACCAGGATACCGAAATACCACTTATTGTTATACCAGCAGCACCTGAAAATCATATCGCAGAAAATCCTAACGAAGAGAAGATTTTGCCTTCTTCAAATTATTTCAACGATACTCCCGAGCTCAAGAGATCTGAGTCACCTGATTTACGTTTCGGGGAAGTTATTGTTACTGCTTTAGTAcatgatattatagataatacAAAGTCACTTGACActgaatcacaaaaaaaaatattaccgaTATCAAAATCTATGGTTCTCAAGAAGCCAGACGTGGATTTCGACGCCATTGACGTTGAATCCGAAACAATTGAGAAAATGGATTGCGATTCACAGTCGTTATTTTCATTGCCGGAAAGTTTCGTTAACGAAGTGGAGGTTCCAAATGATATTACTTTTGATAATACAATATACTTGCCGCGAGTTGATCGAACCCCATTATCATCAAGGAATAATTCAGCAAACACTAGTCCTCTTATCAGCAGGTTAACACCAACTGCGTCAAAAACACCGGGCTCTAGCTCAAAGCATACCGTATCTCCgtcttttagaaaatatttattttcacctaGAGCTTTAAGCTTTGGAAGATCTCGCACTGTTGGCGGAGAAATCATGCCACTTGCTTTATCTTCTCCAAAATGGAGAGAATATTATGAacacaaagaaaatattaaaaaagaaaaaatacaaaaagtccAGGACCGGAAAAAGAATATGGCGGCTAAAAAGGAAGCCAGGGCGGTAGCAAAGTTGTCCattcaaaaaaaaagacaagctACACAGAAGAAAACTAGACGGACTAAAggaataaaaaaacatattaattgCGCTGGGTGTGAGGAGGTACTAGTTAGCGATGTCGAAgatgacaatttaaaaaacattgGGTGTGATCGATGCCCAAAATGGTTTCATCTTCAATGTACGACTAAAAAAGGGTTACAATATTCAGAAGTTGCGGCGAACGAGTTTATTTGCCACCACTGCATTTTAAATGGTTTAGATTTAGATACTCCTAAAGTAGcctag
Protein Sequence: MTEQGDPGPSRKQRKLCGYDRTKIKEALEAINNGMPIRAASKLFSVPRTTLQDRLAGRIDIDVFKSGRPSVLNPSEEEVLVKWLIQLAKCGFPRKKTDLINSVKKIMKGEKRPNPFKNDTPGQKWYELFMKRHPVLSQRTPESINTARAVVTEEYIRKWFSEFLEFLTKTNNLDILEDPNRILNGDETSFQICPKTGKVIGPKGWKNIYEVKRGSEKETITVMIVITAAGELVAPMVVFPYVKKPPKEVALSVPPTIILGISESGWMRGDLFYEYIANGVNAWLEENEVKKPVVLFVDGHKSHLTYHLSEFCDANQIILYALPPNTTHILQPADVSVFRPFKSEWRKTIKAWQDEQGKPLSKVTFCPLLQKVLDKDMSQTIKNGFERCGLYPFNPNAVDYSKCVKNTLENMEKINGISTIPSSQDIETTVEVLTYYCNDLKEKGIVIDVEKLKDALNELSSTATEKQFVQSSQFNKYQNKVTSTQRNEEVLVINYPEQETNAFAIPQDTGENIDHQDTEIPLIVIPAAPENHIAENPNEEKILPSSNYFNDTPELKRSESPDLRFGEVIVTALVHDIIDNTKSLDTESQKKILPISKSMVLKKPDVDFDAIDVESETIEKMDCDSQSLFSLPESFVNEVEVPNDITFDNTIYLPRVDRTPLSSRNNSANTSPLISRLTPTASKTPGSSSKHTVSPSFRKYLFSPRALSFGRSRTVGGEIMPLALSSPKWREYYEHKENIKKEKIQKVQDRKKNMAAKKEARAVAKLSIQKKRQATQKKTRRTKGIKKHINCAGCEEVLVSDVEDDNLKNIGCDRCPKWFHLQCTTKKGLQYSEVAANEFICHHCILNGLDLDTPKVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01385638; iTF_01385639; iTF_01385640; iTF_01385641; iTF_01385642; iTF_00373868; iTF_00177040; iTF_00039718; iTF_00162450; iTF_00162611; iTF_00404664; iTF_00404662; iTF_00404663; iTF_00404665; iTF_00404666;
90% Identity: -
80% Identity: -