Basic Information

Insect: Cybosia mesomella
Gene Symbol: -
Assembly: GCA_946251875.1
Location: CAMIUH010001794.1:403558-406143[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.2e-11 1.8e-08 35.9 0.0 2 40 21 58 20 61 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.2e-11	1.8e-08	35.9	0.0	2	40	21	58	20	61	0.92

Sequence Information

Coding Sequence: ATGACAGAGCAGGAAGATTCAGGGCCTTCACGGAAACAAAGAAAGCTATGCGGTTACGATCgcactaaaataaaagaagctcTTGAGGCAATAAGTAATGGAATGCCCATTCGTGCAGCCTCTAAACTATTTGGCGTCCCACGAACGACGTTGCAAGACAGATTGGCTGGTCGCATAGATATAGATGTATTTAAAACTGGACGTCCTTCGGTTTTAAACCCATCCGAAGAAGAAACATTGGTTCAATGGCTGATACAACTTGCCAAGTGCGGTTTCCCGAGAAAGAAAACCGATTTAATAAACAGTGTTAAGAAAATAATGAAAGCTGAAAACAGACAAAATCCTTTCAAGAATGATACTCCGGGCCAAAAATGGTACGAACTGTTTATGAAAAGGCACCCAGAACTCAGTCAACGCACACCGGAGAGCATAAATACTGCAAGAGCGATAGTAACAGAAGAATACATACGAAAATGGTTTTCAGACTTCTTAGATTTCCTGACAAAGACAAATAACTTGGACATTCTGGAAGACCCAAACCGCATTCTCAATGGTGATGAGACTAGTTTTCAAATTTGTCCAAAAACAGGCAAAGTTATAGGACCAAAAGGCTGGAAAAATATCTACGAAGTGAAACGAGGTAGTGAAAAGGAAACTATCACTGTTATGATAGTAATCTCAGCTGCTGGCGAACTTGTAGCCCCTATGGTAGTTTTTCCATATGTTAAAAAACCACCTAAAGAAGTTGCACTTAGTGTGCCGCCGACGATCATCTTGGGAATATCGGAAAGTGGCTGGATGAGAGGAGATCTATTTTACGAATATATTGCTAACGGTGTCAACGCATGGCTCGAAGAAAAAGAAGTAAAGAAACCCGTCGTTTTATTTGTTGACGGCCATAAATCCCATCTCACTTATCATTTAAGTGAATTTTGTGACGCAAATCAAATAATTCTGTACGCTTTACCACCCAATACTACACACATCCTCCAGCCCGCCGATGTAAGTGTGTTTCGGCCTTTTAAATCTGAATGGCGAAAAACTATTAAAGCCTGGCAGGATGAGCAGGGAAAACCTTTAAACAAAGTAACGTTTTGTCCATTGTTGCAGAAGGTCTTAGACAAAGATATGTCACGAACAATAAAAAATGGGTTTGAAAGGTGCGGCCTTTACCCCTTTAATCCCAATGCAGTGGATTATTCCAAATGTGTGAAAAACACTTGGGAAAATATGGAAATAAATGAAACACCAACGATTCCTTCGAGTCAAGACATTGAAACCACTGTAGCAGTTTTAACGTATTTCTGTAACGAACTGAAAGTAAAGGGACTTGTTATTGACgttgaaaaattaaaagatgcttTAAATGAGTTAAGTAGTACAGCAACTGTCCAATCGTGTCAGCTTAACAAATATCAAAACAAGGGAACGTCATCAAAACGTAGTGAAGAGGTGTTAGTGATTGATTTCCCAGAACAAGAAACCAATGCCTTCGCCATAGCTCAGGACACATATGAAAATATAGACCGCCAGGATACCGAAATGCCACTTATTGTTATACCAGCAGCACCTGAAAATCAAAACGTAGAAAATTCTGACCTAATTCTAATAACTAAGAATCCTAACGAAGAGAAGATTTTGCCTTCTTTAAATTACTTTAACGATACTCCGGAGAGATCTGAGTCTCCTGATTCACGCTTCGAGGAAGTGATTGTTAGTGCTTTAGTACATGATCATATTATAGATAATACAAAGTCACTAGACCCTgaatcacaaaaaataatattaccgATATCAAAATCTTTGGTTCTCAAGAAGGCAGATATGAATTTCGACGCCATTGACGTCGAATCCGAAACAATTGAGAAAATGAATTGCGATTCACAGTCGTTGTTTTCATTGCCGGAAAGTTTCGTTGAAGAAGTGGAGGTCCCGAATGATATTACTTTTGATACTACCATATTAACCTTGCCGCGTGTTGATAGCTCCCCACTATCATCAAGAAACAATTCAGAAAATACTAGTCCTCTTAATAGAACAATAACACCGACTGGGTTAAAAATGCCGGGTTCTAGCTCAAAGCATACCGTATCTCCATCGTttagaaaacatttattttcacctCGAGCTTTAAGCTTTGGAAGATCTCGCATAGTTGGCAGAGAAATCATGCCGCTTGCTATATCATCTCCAAAATGGAGAgagtattatgaaaataaagaaaatattaaaaaagaaaaattacaaaGAGTCCAGGACCGGAAAAAGAGCATGGTGGCTAAAAAGGAGGCCAGAGCGACAACAAAGTTGGCCAATCAAAAGAAAAGACAAGCTACACAGAAGAAAACTAGAAAGActaaggaaataaaaaaacacattaattGCGCTGGGTGTGAGGAGGTTCTCGTTAGCGATGTCGAAGATGACAACTTAAAAAACGTTGGTTGTGATCGGTGCCCGAAATGGTTTCATCTTCAATGTACGACTAAAAAAGGGTTACCATATTCAGAAGTTGCGGCTAAAGAGTTTATTTGTCACCATTGCATTTTAATTGGTTTAGAGTTAGATTCTCCTAAAGATGCCTAG
Protein Sequence: MTEQEDSGPSRKQRKLCGYDRTKIKEALEAISNGMPIRAASKLFGVPRTTLQDRLAGRIDIDVFKTGRPSVLNPSEEETLVQWLIQLAKCGFPRKKTDLINSVKKIMKAENRQNPFKNDTPGQKWYELFMKRHPELSQRTPESINTARAIVTEEYIRKWFSDFLDFLTKTNNLDILEDPNRILNGDETSFQICPKTGKVIGPKGWKNIYEVKRGSEKETITVMIVISAAGELVAPMVVFPYVKKPPKEVALSVPPTIILGISESGWMRGDLFYEYIANGVNAWLEEKEVKKPVVLFVDGHKSHLTYHLSEFCDANQIILYALPPNTTHILQPADVSVFRPFKSEWRKTIKAWQDEQGKPLNKVTFCPLLQKVLDKDMSRTIKNGFERCGLYPFNPNAVDYSKCVKNTWENMEINETPTIPSSQDIETTVAVLTYFCNELKVKGLVIDVEKLKDALNELSSTATVQSCQLNKYQNKGTSSKRSEEVLVIDFPEQETNAFAIAQDTYENIDRQDTEMPLIVIPAAPENQNVENSDLILITKNPNEEKILPSLNYFNDTPERSESPDSRFEEVIVSALVHDHIIDNTKSLDPESQKIILPISKSLVLKKADMNFDAIDVESETIEKMNCDSQSLFSLPESFVEEVEVPNDITFDTTILTLPRVDSSPLSSRNNSENTSPLNRTITPTGLKMPGSSSKHTVSPSFRKHLFSPRALSFGRSRIVGREIMPLAISSPKWREYYENKENIKKEKLQRVQDRKKSMVAKKEARATTKLANQKKRQATQKKTRKTKEIKKHINCAGCEEVLVSDVEDDNLKNVGCDRCPKWFHLQCTTKKGLPYSEVAAKEFICHHCILIGLELDSPKDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00888185;
90% Identity: iTF_00404663;
80% Identity: iTF_00404664;