Basic Information

Insect: Lerema accius
Gene Symbol: -
Assembly: None
Location: scaffold586:2035482-2044463[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0058 0.36 11.3 1.6 3 23 324 345 323 345 0.96

2 23 0.019 1.2 9.7 0.6 1 22 723 744 723 744 0.95

3 23 2.6 1.6e+02 3.0 0.4 1 22 786 807 786 809 0.82

4 23 0.019 1.2 9.7 0.7 3 21 820 838 818 839 0.94

5 23 0.33 21 5.8 0.1 2 23 847 869 846 869 0.89

6 23 0.0042 0.26 11.8 0.1 3 23 890 911 888 911 0.96

7 23 0.002 0.12 12.8 3.1 1 23 917 940 917 940 0.95

8 23 0.088 5.5 7.6 0.0 1 23 967 990 967 990 0.90

9 23 0.013 0.82 10.2 3.4 1 23 995 1017 995 1017 0.97

10 23 0.0046 0.28 11.7 0.2 1 23 1023 1046 1023 1046 0.95

11 23 0.0016 0.1 13.1 1.3 1 23 1059 1081 1059 1081 0.97

12 23 0.00012 0.0077 16.6 1.8 1 23 1132 1155 1132 1155 0.97

13 23 0.003 0.19 12.2 1.6 1 23 1219 1242 1219 1242 0.96

14 23 0.00065 0.04 14.3 2.0 2 23 1267 1289 1266 1289 0.95

15 23 0.0034 0.21 12.1 0.1 2 23 1295 1317 1294 1317 0.95

16 23 0.0089 0.55 10.7 0.2 1 21 1360 1380 1360 1381 0.95

17 23 0.00086 0.053 13.9 0.6 1 23 1391 1413 1391 1413 0.93

18 23 0.00019 0.012 16.0 0.4 2 23 1504 1526 1504 1526 0.93

19 23 1.3e-07 7.8e-06 26.0 1.1 3 23 1533 1553 1532 1553 0.98

20 23 0.0054 0.33 11.4 0.3 1 23 1572 1595 1572 1595 0.93

21 23 0.043 2.7 8.6 0.0 1 23 1622 1644 1622 1644 0.98

22 23 0.019 1.2 9.7 0.6 1 23 1650 1673 1650 1673 0.95

23 23 4.5e-05 0.0028 18.0 0.3 1 23 1681 1704 1681 1704 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0058	0.36	11.3	1.6	3	23	324	345	323	345	0.96
2	23	0.019	1.2	9.7	0.6	1	22	723	744	723	744	0.95
3	23	2.6	1.6e+02	3.0	0.4	1	22	786	807	786	809	0.82
4	23	0.019	1.2	9.7	0.7	3	21	820	838	818	839	0.94
5	23	0.33	21	5.8	0.1	2	23	847	869	846	869	0.89
6	23	0.0042	0.26	11.8	0.1	3	23	890	911	888	911	0.96
7	23	0.002	0.12	12.8	3.1	1	23	917	940	917	940	0.95
8	23	0.088	5.5	7.6	0.0	1	23	967	990	967	990	0.90
9	23	0.013	0.82	10.2	3.4	1	23	995	1017	995	1017	0.97
10	23	0.0046	0.28	11.7	0.2	1	23	1023	1046	1023	1046	0.95
11	23	0.0016	0.1	13.1	1.3	1	23	1059	1081	1059	1081	0.97
12	23	0.00012	0.0077	16.6	1.8	1	23	1132	1155	1132	1155	0.97
13	23	0.003	0.19	12.2	1.6	1	23	1219	1242	1219	1242	0.96
14	23	0.00065	0.04	14.3	2.0	2	23	1267	1289	1266	1289	0.95
15	23	0.0034	0.21	12.1	0.1	2	23	1295	1317	1294	1317	0.95
16	23	0.0089	0.55	10.7	0.2	1	21	1360	1380	1360	1381	0.95
17	23	0.00086	0.053	13.9	0.6	1	23	1391	1413	1391	1413	0.93
18	23	0.00019	0.012	16.0	0.4	2	23	1504	1526	1504	1526	0.93
19	23	1.3e-07	7.8e-06	26.0	1.1	3	23	1533	1553	1532	1553	0.98
20	23	0.0054	0.33	11.4	0.3	1	23	1572	1595	1572	1595	0.93
21	23	0.043	2.7	8.6	0.0	1	23	1622	1644	1622	1644	0.98
22	23	0.019	1.2	9.7	0.6	1	23	1650	1673	1650	1673	0.95
23	23	4.5e-05	0.0028	18.0	0.3	1	23	1681	1704	1681	1704	0.96

Sequence Information

Coding Sequence: ATGTTGGTAAGCCTGACGCCATTTTACGCGCACATGCGCAGAACGACAGGTGGTCGGCGACTCGACCCAGCTATCCCGACCGAACATCGACTTCTCATGCTCATCATCAGCCGCTTTCGTGTTCAAGTCAGAACGATACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGTCCTCGCATCAAAAATAAGGGACTGCGTTTCCGTACAGGTATGTAATGCATTTAAAAGGCAAGAGAATGGAGTTTTGAGTGAAAGTAGACCCTCGGGTGTACGTGAGAACTCGTCATCCGCCCCGGTTCGTGTAATGATAGGCAGCGCTGTTGGGTGGAGATGTCGTAAGATCGTCCACCATTTTGTAACGTTCTACAGCTATCGGTCGACTCGTGGCCGCGTCGCGTCGCATTCCGTGCAGCCGGTGAGGAATGGCGCGCATGATGAGGGTCGGATAACAGAGAATGACGACCTGCCAACTAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATATATTTAAGGAAGTTTGTGCAAGGACACAAAACAAGCTACAGTCTCTGAGTAATAAAGATGGCAGCCTACTAGAAGAGATTAAGGTTAAAAATGAACCTTTGTCAGATGGGGCCTATGATGATGGAGTGGTTATAGATGGTTCCTATCCTGATAGTGAGAATGTGGCAAATAAATTGCAACCAGAAGGTCCACCAATCTTGGCATCATTGGGGCTCACGCCGAGGAGTGATAAGGGTGCAGACAGCGACAAGGATGAAGAAGATGAAGATGATGATGAAGAAATGAATGAGTCCCAAAGTTATCCACCGATCGTGAACGTTCCTAACATGCCAGAAGTTTCCATCACTGTCATGAGGCCTACAGGTGAAACTCTACAATCACGACAAGGTATTCAACAACTTGCATCTAAGGATTGCCTCGTTTGCGGACGAACGTACAGATACTCTCACAATGCAAGACGTCACGAACTCACTTCACACGGTTTTGATAGGTACACCAACAAAACAACTCACAAGAAAACCTCATCGCACCTACAACCAAAACTTAGGCCTAATCCCTTCAATCCCAAAGCCCGCCTGATGCCCAATCCTATTAGTCATAAAATGCAACTCCTCCCGAAGAACATTCCGACCAAAACACTTCCACAAAAAACTATCACTCCAGCAAAACCGATACCGATCAAAACTATAAAACCACCGCAAAATAACCTGCCATATCCACTGCGTATTAAAGCGTTGAAAGATTTACAAATTAAAAAGAAGGAACCGCAGATATTGAAAACGCTTTTAACAACTAAGCCTGAAGTATTAATTTCGGAGCCAGAGATAATTAATTCTGGCCCAGAGAGCCCTGAGACTTTAATATCGGAACCAGAAATAGCTTCTTTCCAAGTAGAGGCTATTCTATCCGAGCCCGACGGTTTTGTTAACCAACACGATGAAGAAATGGATCAAGGTCAATTTAAATCAAACAATCAAGGTCAGAACTATGACACTGTCGATATGGAATCAGATAATGAAATTGAAATTGCTCGGCAACAAGAAAATGAGTGTGATGATGAACAAGAGAATGAGCCAGATAATAATGGAGATAACGTTAACGATCAAGATAACGCAGCAGCAGCTCACAGCGATAGTGAGAAACACCAACAGGATAATGACATTAAAACCGAGGGTGATAATGAAAATAATGATATGAATAAAGATGAAGAACAAGCAAAAGACGATGAGGAAAGAGAGAATGAAGATCAAAACCATCAAGATGAACATTATGAAGATGATGATGATGAACTACCGCCAGTGAGCCTTGCGCCTGTTGTAGAGATCAATGAAGACATGCAAAATAATTCTTACAACAGTGAGCTAAATGAAGAAGAAGAAGAAGATTTTGAATCAGCAGATGCCAACGATACGGTAGATGGTGAAGAAAATATCAAAGAGCTAGATCCAAATAAAACGTATGTTACTAAGTTACAACGAGATTTTATCGTTAAGTATCGTGACATCATTGAACAGATTAATACTAAAAAATGCCTTTGCTGCAAAAGAGAACATCCACGGAGAAAGGCAGTAATTCAACATTTACAAAAGAATGGCCATAAAGTACCTAAACATACGTGTTACAATTGCGTAATAACTTTCAGTCATATTGGAGCATTACTTAGTCACATGAGGTCTAATACTTGTACTGATTTATGGAAGATAATATATAATGAGAATGGAATTACAGATGATCTTGTATTGGAAGATGAACCGAAGGATCCTAAGATTCAATACAAAGACATATTTAATGCTAGGTCTTACTCTTGTAAGCTGTGTCCAGCTAAATTCCAGTTAAAGCAATTTATAATGAAACATGTTTTAGATGTTCATGAAGATAATCAATCTAAAGTGCATTTGGCTTGCGTGCACTGTGGATCGAGATTCAAAGATACGAAGTTGTGGAAAAAACACATCCGAAATGGCGAATGTACTGTGTATATTTCGTGTGACCTATGCTCAGAGAAGTTTGTCAATATGCAAGACTTCAATGACCATGCTTTAGCCGTGCATGCTGGCAACTTCGATTTGTCTGATAGCCACAGCAAATGTGTCGATGGTCGACCAACGGATTGCCCTATATGCGGCAAGAAAAACAGTAGTTATCCTAATTTGGTTAAACATTTGAAGATTATTCATAACGAGGAAACTCCTCATTACTGCCAGCATTGCGATTCCAAATTCGAACAAGCTGCCGACCTCAATAAGCATATTTACATGCAACACTCGGACAGGTCTCTGGGTGTACAGATTTCATCAGAACCCGACATGTCCCTCGTCAAGGAAGAAGCAGAAGAGTACCATTATTCTTGTACTGAATGCAATGCTATTTTCGAAACAGTGGACGCATGGACCGATCACCAAGTGGCAGAACACAATCAAGTTGCTCATCATTGCGACCAATGCGAAAAGAAATTTTTGCGACCCTCTGAGCTGGCCGAACATAAAAATACACATTTGCGTGTTAAATTCTATCCATGTAACATTTGTTCAAATTCGTACAGTACTCCTCAGAAGCTTTCCGAACACGTCCAACAAGTCCACCCTGGAACAGGAGGATATAACTCCTTAGATGCTGAATTTTTCTGCGACATTTGCATCAGATCATTCAAAAGCCGCCAGGCCTACTCTAATCATATGCGTATTCATTCTAAAGTGCCGACTACTAATAGGAAGCCTGGGGAAACAAATCCGAAGGGATTCCCTCCTCAAATTATTGGGAAGCCTATTCGACATTTCTCTATGGTCCAACCGAGTTTCCTATCGTTCAAGCCAAATTGTAATGTTCCTAACGCACCTTATTCTTGTGATATTTGTGGCAAAGGTTTTATGCATAAGAAAAATATATGGAAACATAAGAAAGTTCTGCACGCTGATTTGATAAACGATAGAAACGATAGCGAAGAGAATACTATGGCTGCGTCAACAGAAGAAGACGACTACAATATGGATGAAAATGGCACTATGTTGTCGACGCCGCAGTTCAACAGTTTCAATTTTACAAATATGACAAACAATGTGCCGCAGCAACCGCAGCCGCCGGCACAAGATCCTATGCCATATTCATGTGAATTGTGCTACAAGCGATTCCCTCTAAGAACGAGTTTATGGAAACATAAACGCGCCAAGCATGGAATTATTAATGCCAGTGCTATCGGTCCTTCCGATTCTCAGGGAACTCCGAACGAAGCGTCGGGTCGGTCGAGTTGTACTATATGCAAAATAAGTTTCTCTGACAAGAAATCTTATTATCGACACAGGAAAAATGTCCATAAATCTACCGTGCAGATGTGCAAGATATGCGGCAAACCACTTAGTTCAACAGTCGAGCTTTACGAGCATTTGAGGGCTGCTCACGCGCAAGAGTTGTTAGGCTATAATGCTAGCCAGGGACCTAGCAAGCAAGAAATAGTACCAGAAATAGAACCTGACTATGAACAAGATCAGGATTCGATGGATCCTAATGCCGAGTATCAGGCACGATACCCTTGTGACACGTGCGGAAAACAATTCGTAGGTCTTCTTGCGTTGCAAAATCATCAATGTTTGAATCAGATGCAATCACAACCGCAAACTTTCGACTGCGAGATTTGCCACAAGAGCTACACGTCGATCGCTGCTCTAAAGAGCCACCGCGGTTGGCATTTACGTTCACCCGATGGCAAAGCGGCTGCCAATAATTCCGGTCTTTGGATGCCGCAACACAAAGTTACAAGCAAAGTAAGTAAACATGAAGTAGTCGACGCTTCACAACTGGCCAAAGTTCAACATTCGACCCCCGTGAGTATGGTCGCTAAACGAAGATTACCACCAGAGGTAGAAGTAACCGTCGTTAATCCGAACAAGAAATTGCGATCGGACGATTCCGTAGAAATGGATCAACAAAATAATTCGTCCTCTGGAGTCGATGATAGGTACTGTAATCTATGTGACAAGGAATTTACGAAACGGGCGGCGTATCAACGTCACATGGACGAGGTTCATCAACCTAACTCGGTATTCTGTCCGGTTTGCGACAAGAGTTTCACGCGGAAGTCGACGTTGATAGTTCACATGAAAAAGCACTATGACGGAGGTGAAGGTAGTTCTACGGGAACATGTCAGATGGACGAAGATGCGCACGTGTGTGATGTTTGTGAAATGCCATTTGAAACTGCGAATGAGTTGAATTCTCATCGCTCGTTACAACATGGCGATGGAGACGGGGATGGTGAAGAAACTGGTGAATCTGAGGATGAGGGAGTGGGTAATGTCCAGCAACCGGGAGAATTTACTTGTAGTCAGTGTGGTGACGGCGTGGCGACACCCAGAGATTTGATCGCTCATCGCGCGATGCACGCGACGCCTACAAAGTTCTTCTGCAACATTTGCAAAGTTTACTTTGCCAGGGCTCTCGATCTCTCCTCGCACACCAGAGCGAGACATTCGGACAACGACAAAGTTTGCTTCCCTTGTGCCATGTGCGACCGCTCTTATATGAATAAGAAAAGTTTGCAGCGTCATATTGAAATGGCTCACTGA
Protein Sequence: MLVSLTPFYAHMRRTTGGRRLDPAIPTEHRLLMLIISRFRVQVRTILCLSSRGELLPIFPTTSSDDSEPPVLASKIRDCVSVQVCNAFKRQENGVLSESRPSGVRENSSSAPVRVMIGSAVGWRCRKIVHHFVTFYSYRSTRGRVASHSVQPVRNGAHDEGRITENDDLPTNVCRKCMDNVNNWHIFKEVCARTQNKLQSLSNKDGSLLEEIKVKNEPLSDGAYDDGVVIDGSYPDSENVANKLQPEGPPILASLGLTPRSDKGADSDKDEEDEDDDEEMNESQSYPPIVNVPNMPEVSITVMRPTGETLQSRQGIQQLASKDCLVCGRTYRYSHNARRHELTSHGFDRYTNKTTHKKTSSHLQPKLRPNPFNPKARLMPNPISHKMQLLPKNIPTKTLPQKTITPAKPIPIKTIKPPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLISEPEIINSGPESPETLISEPEIASFQVEAILSEPDGFVNQHDEEMDQGQFKSNNQGQNYDTVDMESDNEIEIARQQENECDDEQENEPDNNGDNVNDQDNAAAAHSDSEKHQQDNDIKTEGDNENNDMNKDEEQAKDDEERENEDQNHQDEHYEDDDDELPPVSLAPVVEINEDMQNNSYNSELNEEEEEDFESADANDTVDGEENIKELDPNKTYVTKLQRDFIVKYRDIIEQINTKKCLCCKREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFSHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDPKIQYKDIFNARSYSCKLCPAKFQLKQFIMKHVLDVHEDNQSKVHLACVHCGSRFKDTKLWKKHIRNGECTVYISCDLCSEKFVNMQDFNDHALAVHAGNFDLSDSHSKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHNEETPHYCQHCDSKFEQAADLNKHIYMQHSDRSLGVQISSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLSEHVQQVHPGTGGYNSLDAEFFCDICIRSFKSRQAYSNHMRIHSKVPTTNRKPGETNPKGFPPQIIGKPIRHFSMVQPSFLSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLINDRNDSEENTMAASTEEDDYNMDENGTMLSTPQFNSFNFTNMTNNVPQQPQPPAQDPMPYSCELCYKRFPLRTSLWKHKRAKHGIINASAIGPSDSQGTPNEASGRSSCTICKISFSDKKSYYRHRKNVHKSTVQMCKICGKPLSSTVELYEHLRAAHAQELLGYNASQGPSKQEIVPEIEPDYEQDQDSMDPNAEYQARYPCDTCGKQFVGLLALQNHQCLNQMQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDASQLAKVQHSTPVSMVAKRRLPPEVEVTVVNPNKKLRSDDSVEMDQQNNSSSGVDDRYCNLCDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYDGGEGSSTGTCQMDEDAHVCDVCEMPFETANELNSHRSLQHGDGDGDGEETGESEDEGVGNVQQPGEFTCSQCGDGVATPRDLIAHRAMHATPTKFFCNICKVYFARALDLSSHTRARHSDNDKVCFPCAMCDRSYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00277537;
90% Identity: -
80% Identity: -