Lacc012189.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lerema accius
Gene Symbol
-
Assembly
None
Location
scaffold518:202-42319[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 49 2.7 1.7e+02 2.9 0.4 2 23 62 83 61 83 0.93
2 49 0.076 4.7 7.8 7.4 1 20 109 128 109 131 0.94
3 49 0.024 1.5 9.4 1.2 1 23 137 159 137 159 0.98
4 49 0.0086 0.54 10.8 2.9 1 23 165 187 165 187 0.97
5 49 0.0016 0.097 13.1 5.7 1 23 193 215 193 215 0.99
6 49 2.7e-07 1.7e-05 25.0 1.0 1 23 221 243 221 243 0.98
7 49 0.041 2.5 8.7 7.2 1 23 249 271 249 271 0.99
8 49 1.5e-05 0.00092 19.5 0.2 1 23 277 299 277 299 0.98
9 49 2.9e-06 0.00018 21.7 4.2 1 23 305 327 305 327 0.99
10 49 0.88 54 4.5 0.3 9 23 427 441 425 441 0.90
11 49 0.00021 0.013 15.8 3.5 2 23 447 468 446 468 0.96
12 49 0.0054 0.33 11.4 2.7 1 23 474 496 474 496 0.94
13 49 3e-05 0.0019 18.5 0.5 1 23 502 524 502 524 0.98
14 49 0.0014 0.087 13.3 6.3 1 23 530 552 530 552 0.97
15 49 2.8e-06 0.00017 21.8 3.4 1 23 558 580 558 580 0.99
16 49 3.7e-05 0.0023 18.2 1.4 1 23 586 608 586 608 0.99
17 49 0.09 5.6 7.6 1.0 1 16 614 629 614 630 0.93
18 49 0.41 26 5.5 0.4 3 23 709 728 707 728 0.83
19 49 9.6e-06 0.00059 20.1 2.1 1 23 764 786 764 786 0.98
20 49 0.00017 0.011 16.2 0.1 1 23 792 814 792 814 0.98
21 49 0.0022 0.14 12.6 0.8 1 23 841 863 841 863 0.98
22 49 0.0029 0.18 12.3 0.3 1 16 867 882 867 884 0.95
23 49 0.0018 0.11 13.0 0.1 5 23 885 903 883 903 0.96
24 49 0.0021 0.13 12.7 9.8 1 23 907 929 907 929 0.96
25 49 1.4e-06 8.9e-05 22.7 0.9 1 23 935 957 935 957 0.98
26 49 0.0064 0.4 11.2 4.1 1 20 963 982 963 984 0.94
27 49 0.00081 0.05 14.0 2.4 1 23 1062 1084 1062 1084 0.98
28 49 8.8e-05 0.0055 17.1 1.9 1 23 1088 1110 1088 1110 0.97
29 49 4.8e-05 0.003 17.9 2.9 1 23 1116 1138 1116 1138 0.99
30 49 1.8 1.1e+02 3.5 2.2 3 23 1146 1165 1145 1165 0.93
31 49 4.4e-05 0.0027 18.0 0.1 1 23 1171 1193 1171 1193 0.99
32 49 0.00077 0.047 14.1 2.9 3 23 1199 1219 1197 1219 0.96
33 49 7.7e-07 4.8e-05 23.5 1.2 1 23 1225 1247 1225 1247 0.98
34 49 0.0037 0.23 12.0 2.1 1 19 1253 1271 1253 1273 0.93
35 49 0.016 0.96 10.0 3.8 1 23 1279 1301 1279 1301 0.99
36 49 0.022 1.4 9.5 2.1 2 23 1374 1396 1373 1396 0.96
37 49 0.0004 0.025 15.0 3.2 1 23 1402 1424 1402 1424 0.98
38 49 0.38 24 5.6 3.3 2 23 1426 1447 1425 1447 0.97
39 49 0.00013 0.0082 16.5 0.3 1 23 1453 1475 1453 1475 0.97
40 49 0.001 0.063 13.7 2.4 1 23 1487 1509 1487 1509 0.97
41 49 0.048 3 8.4 3.5 1 20 1515 1534 1515 1537 0.95
42 49 2e-05 0.0013 19.1 0.3 1 23 1543 1565 1543 1565 0.99
43 49 4e-07 2.5e-05 24.4 0.5 1 23 1571 1593 1571 1593 0.98
44 49 1.7e-06 0.0001 22.5 0.6 1 23 1599 1621 1599 1621 0.99
45 49 7.2e-06 0.00044 20.5 2.7 1 23 1627 1649 1627 1649 0.99
46 49 8.7 5.4e+02 1.3 0.2 2 23 1715 1736 1714 1736 0.94
47 49 0.0034 0.21 12.1 0.5 1 23 1742 1764 1742 1764 0.98
48 49 0.01 0.62 10.6 2.9 1 23 1794 1816 1794 1816 0.99
49 49 0.078 4.8 7.8 0.3 7 23 1828 1844 1822 1844 0.87

Sequence Information

Coding Sequence
AAATTTATTTTAACATTAAATTATTGTTTATCCTTTAAATGTTTTTTTAATTATGAAGAGTGGTCTCCAGGCGACAAGCGACGGTCGAAAAGGATGTCACAGACGAAGACACCCCAAGACTATAAACACATGAACGGTGACACTCGTCGGGAAGGAATTGTTGGAGCGTCGAATAAAAAAATGTCATGTCAGTTATGTCCATACAAAACTTTTAGTGTTCCCCGTTTTACAGCACATATGAAGGCCCACGCTGCGAATAAGTCGTTTAAATGTGATCAACGAAGTTTAAATTACCATATGGCAGGACATTCTGGTGAAAAACCATATTCGTGTAATGTGTGTAACAAACAATTTAGTGATAAGCTATGCTTACAAAAGCATTCGAAGTGTCATTCTGGTGTGAAAGTATATTCGTGTGAGCTGTGTATTGAGAAATTTAACTCTCAACCTAATCTGCATGGACACATAAAAAAACATTTAAGTGAAAACCCATATTCATGTGATATTTGTAAACAGATTTTTTATTTGAAATGTAAGTTAAAACAGCATATGGTGATACATTCTGGTACGAAACCATATACATGTAGAATATGCTTTAAGGGATTTAAACGGACGCAGCATTTAACGGAACACACCAAAAGACATTCTGGTGAGAAACTATTTTCTTGTAATGTTTGTGACAAGAGATTTTCATCCAAAGGTAATCTAAAACTACACATGTCGATACATTCTGAGGATAGACCATTTACATGTAGCGTATGCTGTAAGAGATTTAAGTTATCGCAACATTTGAGTGAGCACATGAAAACACATACGGGTGAGAAACCATTTTCATGTGATATTTGTAAAAAGATTTTTGCTACTACGGGCAACTTGGCTGCACACAGGCGATTACATTCTGGCGAGAGACCATATACATGTAGTATTTGTAGCAAGACATTTAAGCGATCGCAACATTTAAAGGGGCACATGAAGATACATAGTGATAAAAAACCTAATATTATTGTTGCTCCAGAATGTATTGTAGAGACAGTTAAGATAAAAAGTACATTTATTTTGTACACAGGTAAAGATTGTTCTCCGGATAATCTGTCCTTAAGAGAGCTGACACAGACGAAGACACCCCAACACTATAACATGAACGATGACACTCGTCGGGAACAAGGAATTGACGGTCCGTCAATTGAAAAGATGTTGTGTCAGTTATGTCCTTATGAAACTACTTGTGTAAAGCAGCTTAAAGCTCATGAAAAAGCTCATTCTGCGCGTAAATCTTTTAAGTGTAGTCAATGTAGTAATCTTAAATACCATATGGCAAGGCATACCAATGAAGAATGTACTTGCCAAGTGTGTAATAAAATGTTTGGTGATAAAATTCGGTTACAACGACATATGAGGTATCATTCTGGTGTTAAAATGTTTTCCTGTGATTTCTGTACTGAGAAATTTAATCGTAAACTTCACTTGCAACAGCATTTAGGAGCACATTTAAGTGAGACACCATATTCGTGTGATATTTGTAAGCAAAGTTTTATTGTTAAAGCTAAATTAAAATTACACATGCGCGCACATTCCGAACGGAAGCAACATATATGTGGGATTTGTTTTAAGAGATTCAAACTGTCGCATTATTTAAGTAAGCACATGAAAACACATACAGGTGAGAAACCATATTCATGTGAAATCTGTAGCAAGAGTTTTACTCACAAGTATTATCTGTGGGGACACATGAAAACACATTCCGGGGAAAGACCATATTCTTGTGATATTTGTAATAAAAGTTATACGCTGAGGGCTAACCAATTAAGACACATGAAAACGCATTCTGGAGAAAAGCCATATTCTTGTGATTTTTGCACGAAAAGTTATACTCGGAAAGTTAGTTTATTGTTTTGTGCCACGAGTTTAACCATGTATACTCCACCTTGCCTTACCTTAATCTATGTTGAGAGTGTTTTTTTTTTGTGCGCAGATAAAGATTGTTCTTCAGATGAAGATCTACCTTTAACAGAGCTGTCACAGACGAAGAAACTCCAAGACTATAACCACATGAATGATGACACTCTGTCGATTGATGATAAAATGTCACATGATGATAGTAATGATGATGATATATTGCTTCCTTGTAATATCTGTAATGTTTTTATTGCAAAATCCTTTTTACAAAGACATTTGCAAACACATTCCGTAGAGGAACCTAAGAGTAATTTAATTAATCATTTAACGATACAATCAGGTGAGATGCCATATACATTTACTGTTGGCTATCAATCTGGGAATATTAAATCACATGTTTGTAAGGTTTGTAATTTAATGTTTACTGCGAAGTCAGAGTTACAGAAACATTTGCGAACACATTCTGTAGAGAAACCATATACATGTAGTATCTGTTCTGAAGGGTTCGCCCGTGTGGTTGATTTGACTAAGCATATTAATGCACACAACGTGATTTATTCAACTAGTTCTTGTGATAAGACGTCTCAAAAGCCTAATTCAGAGAAACATTCTAAGGAGAAACCATTTACATGTAATATTTGTTTAGAGGATTTCGACAAGTTGAGGTATTTAAGGAAGCATATTAAGGCACACAACGTACTTTATAAATGTAATCATTGTGAAAAAGCTTTCGCGGAAAAAAGCAATTTGGACAACATTTGTTCCGAGGGATTTACCCGTCTGGGACTTTTAAGGAAACACATAAACACACATAACAAACTCCATGCGTGTAATCTGTGTCACAAGAAATTTACTCATAAGTGCAATTTAGAAAAACACGTCATAACACATTCTGGAGAGAAACCCTTTACATGTAATATTTGTTCTAGAAGTTTCAAGAAGCCGGCAAACTTAAGTATGCACATGAAAATACATTCTGATGAGAAACCACATGCCTGTCATATTTGTACGTCAACATTTAGTGAAAAGTGTAATTTAAAAAGACATATGACAGAGCTGACACAGACGAAGACACCCCAACACTATAACATGAACGATGACACTCGTCGGGAACAAGGGATTGATGCACCGTCGATTGACAAGATGTCGTGTCAGTTATGTCCTTATGAAACTACTTGTGTAAAGCAGCTTAAAGCTCATGAAAATGCTCATTCCGCGCGTAAATCTTTTACTTGTAGCAAGTGTAGTTACATCGCAACTCGTAAGATACATTCAGGTGAAACGCCATATTCATGCCAGATTTGTAGCAAGGAATTTAAAAATAAAATTCGTCTGCGACAACACTTCGAAACCCACTCTGGCGGGTATGCGTGTGATATTTGTAAGAAGGTTTGCACTACTAAAGGCAAATTAAAAAACCATTTGTTGTTACATTCAGTAGAGAAACCATTTACATGTAATTTTTGTTCGAAGGGATTTAAACGAATGGATTATTTAAAGATACATCTTAAGACACATGCTTCTGAAAATTCTGAAGCTTGTTATGTATGTAATGCACTGTTTTTAAAGTGTAATTTAAAAAGACATTTGCTAACACATTCTGTAGAGAAACCATATGTATGTGAAATTTGTTCCAAGGGTTTCATACAATTGGGACGTTTAAAAGTACATATGATTACGCATGAAAAACTATACGGATGTGAGATTTGTGAAAAGAGGTTTTCTCATAAATGTAATTTGGATAAACATGTCATAATACATTCGGGAGAAAAACCATATTCTTGTTCAGTTTGCTCTAGGAAATTCAAAAAACCGGCTAATTTACGCAATCATATGAGGATACATTCTGGTGAGAAGCCACATGCATGTCACATCTGTAACGCTACTTTTAGCTTGAAGTGGAATCTAAAAAAACATGCTCACGCTGCGAATAAGTCGTATAAATGTCATAAGTGTAATTATATGACAATGTATAGAAGTAAAATCGAAGTCCATATGAAAATACATCTCAGGGAAAAACCATTATTCGTGCGACATGAAGATTGTTCTCCGGATGATCTGACCTTAAGAGAGCTGTCACAGACGAAGACTCAACACTATAACATGAACGATGACACTCGTCGCGAACAAGGAATTGACGGACCGCCGATTGATAAGATGTCGTCTGTTAATTTTCGACGTTTCTTTGCACATTTAAAGGCCCACTCGGGGACTGAATCTTTAAAATGTCATAAGTGTAGTTACATGTCAATAAATAGAAGTAAATTCGAAGACCATATTATGATATCACATCCCGGTGAGAACCCATATTCGTGCAACGTGTGTAAATATCCGTTTAAACGTATAAATACATTGCATCGACATTTAAGGGAACATTCAACGTGTGATTTTTGTAATAAAAGCTATAGGTGCAATGAAAGACTATATGAACATCTAAGAATACATTTCAGTAAAAAGCCCTATTCATGTGATATTTGTAACAAAGAATTTATTAGTAAATATGTGCTAGAAAAACACGCGGTAACACATACTGGAGAGAAACCATATTCTGATCAGATGCCGTTTAAATGTAATATTTGTTTTAAGGTATTTGGAAATGTGAAATGTTTACAGAAACACGTCGCGTCACACATGATTGAGAAACCATATTCATGTAAAATTTGTAACAAGGGATTTATTATATTTCGTTATTTGAAAAAACATTTAGAATGTCATTCTGGAGAGAGACCATATACATGTAGCGTTTGTGGTAGAAATATAAAACGACTGGAAAGTCTAAAAGCACATATGAAAATACATACTGGTGACAGACCATATCCTTGTGACATTTGTGATAAAAGATTTGCTTCAAAGTCTAAATTAAAAAACCATTTAATGGTACATTCTAGTGAGAAACCATATACATGTAACATTTGTGATAAGACTGCTAAAAGGTTAAGTGATTTAAGGTCACACATGCAAGTACATTCTGGTGAAAGACCATATTCATGTTCTATATGTAACAAGAGATTTCGTCGACCATCTGAGAAACGGCAGCACTTAAAGACACATTCTCGTGTAAAGCCCACGAAATATTCTGGAATTAAAATTTTACAGATGCACTTGAAAAGACATACTGATGAAGATTGTTCTCCGGATGATCTGTCCTTAAGAGAGCTGTCACAGATGAAGACACCCCAACACTATAACATGAACGATGACACTCGTCGGGAACAAGGAATTGACGGACCGCCGATTGACAAGATGTCGTGTCAGTTATGTCCTTATGAAGCTGTTAATTATCGACGTTTCTTTGCACATTTAAAGGCTCACGCTGCGAATAAGTCGTTTAAATGTGATCAGTGTAGTTATATAACAGTTACTAGGAGAAGTTTGGAATATCATATGGCAGTACATTCTAGTGAAAAGTCGTATTCGTCTCACGTATCTGACAGTGAACAAAAACTAAATAAATCAAAGCAAGTACATTCTGGAGAGAAACCATATACATGTAGTATATGTTGTAAGGAATTTAAAAATGGAACGCCTTTAAAGGAACACATGAAAACACATTCAAGTGAAAAACCATATTCATGTGATATTTCTAATAAGAAATTGAATCAGAGCATTAATCTACAGAGGCACATGAACACACATAGTGTGGGTATTCCTGAAGCAGCTAGGATCAAGGCGATAGAACAGGCGACAGATTTCGACGGCTCCAGAATAGTTGGTGGCGCCGTCGCTGGTCTAGGACAGTTTCCGCATTTGGGTGGCTTAGTAATTACTCTTCAATCCGGACTGACTTCAGTATGTGGCTCTTCATTACTCAGCAACACGAGGCTCGTGACTGCTGCTCACTGCTGGTTTGATGGTAATTGA
Protein Sequence
KFILTLNYCLSFKCFFNYEEWSPGDKRRSKRMSQTKTPQDYKHMNGDTRREGIVGASNKKMSCQLCPYKTFSVPRFTAHMKAHAANKSFKCDQRSLNYHMAGHSGEKPYSCNVCNKQFSDKLCLQKHSKCHSGVKVYSCELCIEKFNSQPNLHGHIKKHLSENPYSCDICKQIFYLKCKLKQHMVIHSGTKPYTCRICFKGFKRTQHLTEHTKRHSGEKLFSCNVCDKRFSSKGNLKLHMSIHSEDRPFTCSVCCKRFKLSQHLSEHMKTHTGEKPFSCDICKKIFATTGNLAAHRRLHSGERPYTCSICSKTFKRSQHLKGHMKIHSDKKPNIIVAPECIVETVKIKSTFILYTGKDCSPDNLSLRELTQTKTPQHYNMNDDTRREQGIDGPSIEKMLCQLCPYETTCVKQLKAHEKAHSARKSFKCSQCSNLKYHMARHTNEECTCQVCNKMFGDKIRLQRHMRYHSGVKMFSCDFCTEKFNRKLHLQQHLGAHLSETPYSCDICKQSFIVKAKLKLHMRAHSERKQHICGICFKRFKLSHYLSKHMKTHTGEKPYSCEICSKSFTHKYYLWGHMKTHSGERPYSCDICNKSYTLRANQLRHMKTHSGEKPYSCDFCTKSYTRKVSLLFCATSLTMYTPPCLTLIYVESVFFLCADKDCSSDEDLPLTELSQTKKLQDYNHMNDDTLSIDDKMSHDDSNDDDILLPCNICNVFIAKSFLQRHLQTHSVEEPKSNLINHLTIQSGEMPYTFTVGYQSGNIKSHVCKVCNLMFTAKSELQKHLRTHSVEKPYTCSICSEGFARVVDLTKHINAHNVIYSTSSCDKTSQKPNSEKHSKEKPFTCNICLEDFDKLRYLRKHIKAHNVLYKCNHCEKAFAEKSNLDNICSEGFTRLGLLRKHINTHNKLHACNLCHKKFTHKCNLEKHVITHSGEKPFTCNICSRSFKKPANLSMHMKIHSDEKPHACHICTSTFSEKCNLKRHMTELTQTKTPQHYNMNDDTRREQGIDAPSIDKMSCQLCPYETTCVKQLKAHENAHSARKSFTCSKCSYIATRKIHSGETPYSCQICSKEFKNKIRLRQHFETHSGGYACDICKKVCTTKGKLKNHLLLHSVEKPFTCNFCSKGFKRMDYLKIHLKTHASENSEACYVCNALFLKCNLKRHLLTHSVEKPYVCEICSKGFIQLGRLKVHMITHEKLYGCEICEKRFSHKCNLDKHVIIHSGEKPYSCSVCSRKFKKPANLRNHMRIHSGEKPHACHICNATFSLKWNLKKHAHAANKSYKCHKCNYMTMYRSKIEVHMKIHLREKPLFVRHEDCSPDDLTLRELSQTKTQHYNMNDDTRREQGIDGPPIDKMSSVNFRRFFAHLKAHSGTESLKCHKCSYMSINRSKFEDHIMISHPGENPYSCNVCKYPFKRINTLHRHLREHSTCDFCNKSYRCNERLYEHLRIHFSKKPYSCDICNKEFISKYVLEKHAVTHTGEKPYSDQMPFKCNICFKVFGNVKCLQKHVASHMIEKPYSCKICNKGFIIFRYLKKHLECHSGERPYTCSVCGRNIKRLESLKAHMKIHTGDRPYPCDICDKRFASKSKLKNHLMVHSSEKPYTCNICDKTAKRLSDLRSHMQVHSGERPYSCSICNKRFRRPSEKRQHLKTHSRVKPTKYSGIKILQMHLKRHTDEDCSPDDLSLRELSQMKTPQHYNMNDDTRREQGIDGPPIDKMSCQLCPYEAVNYRRFFAHLKAHAANKSFKCDQCSYITVTRRSLEYHMAVHSSEKSYSSHVSDSEQKLNKSKQVHSGEKPYTCSICCKEFKNGTPLKEHMKTHSSEKPYSCDISNKKLNQSINLQRHMNTHSVGIPEAARIKAIEQATDFDGSRIVGGAVAGLGQFPHLGGLVITLQSGLTSVCGSSLLSNTRLVTAAHCWFDGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00887858;
90% Identity
iTF_00887858;
80% Identity
iTF_00887858;