Basic Information

Gene Symbol
-
Assembly
GCA_035220615.1
Location
JASTWQ010000077.1:468634-478480[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 1.3e-05 0.0023 19.7 1.1 1 23 254 276 254 276 0.98
2 32 0.013 2.3 10.2 3.7 1 23 299 322 299 322 0.96
3 32 0.00088 0.16 13.9 0.5 2 23 329 351 328 351 0.96
4 32 0.0042 0.74 11.8 0.1 1 21 371 391 371 392 0.95
5 32 0.012 2 10.4 0.1 2 23 490 511 489 511 0.95
6 32 0.059 10 8.2 0.8 3 23 519 540 517 540 0.89
7 32 0.00027 0.048 15.5 0.2 1 23 611 634 611 634 0.96
8 32 0.056 10 8.2 2.0 1 23 640 663 640 663 0.94
9 32 0.18 31 6.7 1.5 1 23 676 698 676 698 0.97
10 32 5e-05 0.0089 17.8 0.9 3 23 743 764 742 764 0.96
11 32 2.4 4.2e+02 3.1 0.4 1 23 797 820 797 820 0.92
12 32 0.0068 1.2 11.1 0.8 2 23 827 850 826 850 0.94
13 32 1.3 2.3e+02 3.9 0.0 2 23 859 881 859 881 0.90
14 32 0.038 6.7 8.8 0.0 2 23 888 910 887 910 0.93
15 32 0.00013 0.023 16.5 3.2 1 23 918 940 918 940 0.97
16 32 0.027 4.7 9.3 0.8 2 23 977 1000 976 1000 0.94
17 32 0.0003 0.054 15.4 3.3 1 23 1003 1026 1003 1026 0.97
18 32 0.001 0.18 13.7 0.1 2 23 1033 1055 1032 1055 0.95
19 32 0.0013 0.24 13.3 3.9 1 21 1082 1102 1082 1103 0.95
20 32 0.0039 0.69 11.9 1.8 2 23 1117 1138 1116 1139 0.93
21 32 0.52 92 5.2 1.1 1 23 1142 1165 1142 1165 0.94
22 32 0.038 6.8 8.8 2.1 2 23 1172 1195 1171 1195 0.90
23 32 4.4 7.9e+02 2.3 0.2 2 23 1203 1225 1203 1225 0.94
24 32 4.7 8.4e+02 2.2 0.0 2 23 1232 1254 1231 1254 0.88
25 32 0.33 58 5.8 2.7 2 23 1263 1285 1263 1285 0.96
26 32 1 1.8e+02 4.3 0.5 2 23 1291 1313 1290 1313 0.91
27 32 0.024 4.3 9.4 0.1 1 23 1375 1398 1375 1398 0.95
28 32 0.00037 0.066 15.1 1.3 1 21 1425 1445 1425 1446 0.95
29 32 0.46 82 5.3 1.9 2 23 1546 1568 1545 1568 0.94
30 32 1.3 2.4e+02 3.9 0.4 2 23 1575 1597 1574 1597 0.94
31 32 6.5 1.2e+03 1.7 1.9 1 23 1608 1630 1608 1630 0.87
32 32 5.3 9.3e+02 2.0 0.2 1 19 1634 1652 1634 1655 0.92

Sequence Information

Coding Sequence
ATGGCGACGATATCGATGattacgacgacgacgacgacgtcgacgtcgacatCAACGGCGACAGCGATGGCAACGGAGCCGAGAAAATCTTATCACGAGCTGTGTCGCCTGTGCGCTTCCTACGACGCCGTTAGGATGCACATATTCGGCCAGGAAGGCAAGAATCGCCAGCTCGTCGACAAGATCCAGACGTGCTTGCCGTTCAAGATAATGGAAGACGATTGTTTGCCAAAAGTCCTGTGTTATCGATGTATGTACAACTTGGAAAATTTTTATGACTTTAGGACTGCGTGTGTTAACGCAGCTGCTTGGTTGGAAAGAAATAGGCCGAAGGAAGGCGCGAGCGATGACGGTGCAAATGACAGCACACAATCCGGCGAGGTGCACGCGGAGCTTCTTAAAGGAAAGGAAAATATGCCAGTACTTATTCCAGAGGCACCCGTAGTCAATCCTAATGCGGCATTAGGTACACCACCGAGATTAAATTCGGATGGTGAAGCAGATCCCGAGATCGAAGAGATTCTCGACACGAGTGAAGGTACGGATGAAGCTACAGTAATCGACGAATCGGAAGATCGACGATCGGAATACGAGATGGCATACGAGATGGACATGGAGACGAATCCTAGCGACTTTTTGGAAATGACCCCAATGGTAACCGAGGAAAATGAAGAGGAATGCTGTGCGAACAACACGAGTGCCGCGACTACTCAAGATATCGCGGTCTTTTCACATACGCAGTCGCAAAAACATGAAGTCTTTGTCTGTTCTCTATGCAACAAAGCGTTTAGTTCCAAGGGTCACTTGTCTCTGCACGCGAGAATTCACGTGGGTGAGGGTGATGTGATCGGCGAAAGAGTAATCACCGATGACCATACTTCGTACCAACGACCGTATCAATGTGATCTTTGTCATAAATCGTATTCTACTGCGAAACATCGCTGGGGACACGTTTCTACGACACATCGgGGACATCCTGCAGTAACATGTGCATACTGTTCTCGCATATACTCGACGCGATATAATCTCGATGAGCATATAAAATCACGACACGCTGGTCTACCGCCACCTCCAGAATTATCGGTCCCTTTTTCACGCACGGAAACTCGTTATCAGTGCCAAACATGTCCGATGGTGTATACGGATTTAGCAGATTTCAACGCGCATCGGCAGATATGCACACAGGAACAACGTACAGATCTGTTGGGACAAACCGAAGCGCAGAACAATAAGATTTTTGCCGACACGTCCGATATCTCGAGTATAGATTCTGATGACGAGAACAAAGACTTTAGGAACGCCGAGGCTAAATTGGCGAAAAATCCGCAATTAACTATATTGAAACAAGCGTTAACTAAAGGAGACAGTTTAAAACGAAATTTTGAAGATGATGGTTCGACATCCAGCAGCAAGCCGAAAAAAATAGTTAAGTCAGAAGAGGGCGAGACGAGTCCTCAAAAGAGGTGGTATTGTGAAGCTTGTCCACAAAGTTTTACATCGGTGGACAGTTTGAAGGAACACGAGATTAGGCACGATGCCGAGAAGCCATTTTTTTGCATACTATGCAAGAGAGATTTTGTTTTGAAATCTTCATTAATTAGGCACATTACAATGTCACATGGCGTTGATCCTGTTCCTATCGTTGAGAGTGATAAGTGTTTAAAGGCAACGGTAATGCCTCAGAATTGGAACGATCGAGTGGACGTCAGTGTTTATGAGCAAAGTGAAATGAAAGAACCACCAGAGCTCTCTTCATCACCTGAGataaatttagaaaatgatGACAAAGATTATAAGAACAATCACGAGAATATAGAAATCGAAACGGTATTTGTATGTGAGACTTGCAAGAGAGACTTCAACGACCGAGCGTCATTGTGGCTACACATACGAGCGATGCATAAAGAATACGCTGCATTTACCTGTGGAGTGTGTTTAAAAATGTGCTTTAATAATACGCAACTTCAAAATCATGTCGTTATGTATCACGGAAGGTCTAAGCTTTTAGTATCGGAACAAAGAAGGTACAGTTGTACGATATGCGGTAGGCAACATGACTCAAGAAAGAAGCTAATCACTCATGTCTCGATACATAATGTCGATCCTGCCTTTGATCCTGCGAATTTTGTACAATtaaatagtaattattataatgaaaaCTTGAATGGTAACGAAGGAAATGAACAAGTATTAGATTTTGACGGAGAAGATGGCGAGAAGGTCGATTGTTACATTTGTTACAAATCTTTTCCGACTGAGGATCATCTTATACGACATCAGAGAAATGCTCATAAGTCTGACCAGATAGTTTCATTAGGAGATGCTGCGGGTAGTGGAAATACTCTTAGTGTCAATGGTAATGGTAATAGGGCGCagtatcatttattttttgtttgcgAGATATGTGGTAGCTCACATTCGAGCAAATGGGAACGCTGGTTGCATATCAACAATACGCATAACAACGAATCTTCTATTAAATGCGAATGGGAGAATTGCGGAAAGATATTCGCGACAAAATCGTTGCGCAATGAGCATCTCCAGCATCATGCGGTACAAGGACCCTCGCCAAACACTTGCGAGATATGTGGGAAATTGTGGCCTACTCGCGTCGATTATTGGAAACACGTGATGGGCGTACACGCGGACACAGTGCCTCTAATTTGCGGCGTTTGTCTCAAAGTATTTTCCGACGTTATGCAATTAAGCGCACACGTGAAGGCGAAACATTGGCCGCTAACCAGTGGTGATTTCTGTTGTGATATTTGCGGTAGACCGTACTCCAATAAATCAAAGATGTCTCGGCATAGAAAGATCCATGGCTTGGAAGCAGCTATGGACGCCGCATGCGATAATAGCAGTTTCAATGAAACAACAAATGAATCGGTCAAGCCTGATCACAACAACGGCGCTTCGGAAATTGAATTAAGTTGCGATCAGTGTCCTGAACTCAGCTTCACGACATTGGACAGTTTGTGTAATCATCGACGGATAGCACATAACCTTTTCCCGTGTGATTTGTGTAACAAATGCTACGGCAGAACGTCGCATTTATGGAAGCATGTAAATAGAGTGCATAAGGGACACGCAGACGTGACTTGTCCTTATTGCGCAAAGACAAGCGCATCAAGGGATCATCTAGCAGCACATATTGCCAAGATTCATAGGTACATGCCCGCAATGGGTAAGGATAATCAGAACTGCGTTGCTTCCAAGTCCCTAAGCGTAGACGACGGTGTCTTGCATTATTGCGAGAAATGTAATAAGGGATTTCATAAGCGCTATCTGCTCCGTCGTCACATGAAAGGCTGTCAAAACTATCGTAAAGATCCTGGTGCATTGTTGACACGTTGCCGGGCCTGTGAGAGGATATTCAAGGATCGTGCGAGTCTACAGAAACACATTGAGAATCATCATAGTACGTATACTTGCCATTTGTGTAACGAAACAATCACTTCCAAGCTAGGTATCATGACACACAACCGTGTCAATCATATGGATCACCCGGATTTGACGTGCGACCATCCAAGTTGTAAAAAACTCTTTCGCACTAAAGAAGATTTGGAATCTCATCGAAAGGATCACAAGTATCATAACAACCCAAATGTTTGTGATTTTTGCGGTGACACCGTGGAGAATAAGCTGAAACTCAAGATGCACGTATTATCGTTGCATCGTAACGAGATAGGTGTATCCTGTGGCGTTTGCCTCATTCCTATGAAGGACCCCAAAGATTTGAAGAAGCACGTCGAAGCAGAGCACAGCAGCGTTCTTTCTAATCCAAACACATGTCAGGTATGTGGCAAGCAATATGCATCCAAGTGGAAGGCTTTTGATCACACGAAGAAATGTCATGGCAAGGTTTTCCTCACATGCAAACAATGTCTAGCGGTTTTCACAGATGAAAACGATATACGCGATCATTACGAACATGTGCATAACGTTCCGAAGGACCAATTAGCCATTTTCGAATATAGAATGGATATTGGTGTAAAGAGAGAAGGTTACGAGACTCCTGATATTATTGTGAAAGAGGAACCGGATGACTTGGACTTCGATGAGGAAATGTGTGACGAAAGTTCGAACGATTCTCGTAAACGTAGAAGATCGCCTAATGACACATATGATTGCGAGATGTGTCCCGAGATCTTTCTCAATTCTGACACTCTTGCCAAACATTATCAGAACGTCCATAACACCGACCCCGTCCGTATGttcaagaaatttaaaaaagatagcgatagcaagcgcAAAATGAGAAACAGAAACAATTTTGAATGCAAGAATTGCAAAAAGCAGTTTTCTACCAAGACTCTATTCTGGAATCACATAAATTTATGTACACGGCGAAACTCGATAGGAAGATTTGACATCCCGAATAATGTTCCAACATCAATTCTGGAGTCTCATCTGAAGAACAATAATCAGATTCAACGAGAAGAACTACCGCTGACGAACGAATCCAACTTGAACATTCCCGACTTCAACCTATTCGAAGACATTAATTTGCAATTGTCGGCTCAGAAACCTGTGCCGAATCTTATGCCATTGTCGCAGGTGAAGGCGACGGGTAACGGCAAATGCTCGAGAAAAGACTCGCGCAAGGTGTATGATGAATCGACCAATACTGAGTGCACGTGCGAAGTCTGTGGCAAGCAATGGCCCGCCAAGAAACATTTGTGGCAACACCTGATTCGTTTCCATCGCGCCGAAGCTGCCGTTACGTGTGGCGTATGCTTGAAGCTGTGTAAATCTTATCAAGATCTGGCCGACCACTTGAAGGCCGAGCATGCTCCTGTTTTGTCGCCGGAAGGCAACAATTTCACTTGTAAGACATGCGGTAGATATCACAACGCGAGAAGCAAATTGATGTTGCACACGGGTATCCATATTGGGAACTACCAGTGTCAAAAGTGCCTGCAATTTTTGGAGAGCGAGGAGAAACTCACCGAGCATGCAACGAGCTGCAATGGTAAATCGGAGTTTGAGGGTCACGCAGTGGCAGATGAAGATAACGCAAAGAACGACAACGACGAGAAGGGTAGTTTAATCGCCGATGAGACGTCGGTCATTGAGGACGCGGAGGAAGCAGAGGAAGCGGATTTCGAATCGGAAGGCGAAAGGAGTAGGGATATCCACGATGAAGATAATTCGGAAAATAGCGAAGAAGACAATTCGGAAAATAGCGATGATTCGGATAGCGATAGTAACAGTAGTTCGAGCGAAGACGAAAACGAGAACGAAGacggagaggaagaggaagaaaatgaAAACGAAAATGAGTCTGATACAAGATCCACTAGTCGAGAGAGCGGTGATAGTGTATCGTGTAATTCGGAGAGCGACGACGAATCGGATATGGATGAAGCGGAAGTGAACGCGACGGAAAAGAAAGCGCTGCAATTGAGCGATATCGGTAGATTCAGGATGCACGGTGACGGTATTCAAGAGAATATGCCGATAGAGAAGAATGCCAAGGATCAGAAAACCGATCTTACGTCCGTTACCGCAGCGACGGTTGCAGGACAAACTAAACAAAGTAATTTAAATGATCTGTTGATTCCTAATGCACCTGCGAACATGGACAAATTTGAGGCATTTTGTCTCGAGGAATCCGCTAAAGCTGCGACGAGCGATGTAGATTTGTCTGACGATAATGAAGACGATGATGATAACGAGGAAGAGGATgaggaaaataatgaaaatgaggaagaagaagatgGTGAAGATGGTGAAGATGGTGAAGATGGTGAAGATGGTGGCGGGGATGAAGATGAAGATGAAGATGAAGATGAAGATGAGGATGAAGGTGAGGCTGAGACTGAGGCTGATGAAAGTGAGAATGACAATGAGAATGTGGGTGAAGCCGCAgccgaggaagaggaggaagaggaggatgaagacgacgacgacgacgacgatggacCACCTGTGTTAAGTCCAATAATGCCTTTGTTACCAGAAAACGAATCTGAGGAGCATAGTGGCATGACGGATCGCACGAGGCACAAGCTCAGTCCGATGGTTTCGCTGAGTATGACTAAAGATCTGGAGAAGTGCGAAATAACCGAAATGCAAAATGATGTGGAGAACGTATCAAACGCAGCCAACCTCTTCGCGGCTAATAACAACGATCTGCCCGTAACATGGGACGAGAACTTGGATGATAACGGAATCGACAATAGCGATTGCAACTCCGACATTGGAGACAGGAATGTGGAGAAAAACGAGGAATTCAGTGAGGAGTACTGCAAAATAGAAGTGAAGTACGAGGGCGATGATTTTGGAGAGAATTCCGCGTATGAGAACGTAGTGGATAATACTAGAGAAGGTGATGGAAACAATCAAGTGCACGAGGTGCATAATTTGGACGGAACTGTGTTAATGGTGACCAATGACGCGGAAGGTAATCAGATTTTGATAGAACAAAACGTGTTAGGTATTGATAACGAGGATTCTAATGCCGAAGCGGCGCAGTATATTTACCCAGAGAACGCTTACGAGATCGAGGGAGAGGATTATACGACGCGAAACGAAACCGACGTTGGAGACAGAAATGTGGAGAAAAACGAGGAATTCAGTGAGCAATACTGCAAAATAGAAGTGAAGTACGACGGCGATGACTTCGAAGAGAATTCCGCGTATGAGAACGTAATGGATAATAGTAGAGAAGGTGATGGAGGAGACAATCAAGTGCAGACGGATGAGATGCAAGGTAGTATTTCCTACGTTCAACATACATTGGAGAATGAGGACAATAATACGGAGGATGACATCGAGGAGAACAGCAGTGATGTGCAGAAACAGTAG
Protein Sequence
MATISMITTTTTTSTSTSTATAMATEPRKSYHELCRLCASYDAVRMHIFGQEGKNRQLVDKIQTCLPFKIMEDDCLPKVLCYRCMYNLENFYDFRTACVNAAAWLERNRPKEGASDDGANDSTQSGEVHAELLKGKENMPVLIPEAPVVNPNAALGTPPRLNSDGEADPEIEEILDTSEGTDEATVIDESEDRRSEYEMAYEMDMETNPSDFLEMTPMVTEENEEECCANNTSAATTQDIAVFSHTQSQKHEVFVCSLCNKAFSSKGHLSLHARIHVGEGDVIGERVITDDHTSYQRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRYNLDEHIKSRHAGLPPPPELSVPFSRTETRYQCQTCPMVYTDLADFNAHRQICTQEQRTDLLGQTEAQNNKIFADTSDISSIDSDDENKDFRNAEAKLAKNPQLTILKQALTKGDSLKRNFEDDGSTSSSKPKKIVKSEEGETSPQKRWYCEACPQSFTSVDSLKEHEIRHDAEKPFFCILCKRDFVLKSSLIRHITMSHGVDPVPIVESDKCLKATVMPQNWNDRVDVSVYEQSEMKEPPELSSSPEINLENDDKDYKNNHENIEIETVFVCETCKRDFNDRASLWLHIRAMHKEYAAFTCGVCLKMCFNNTQLQNHVVMYHGRSKLLVSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPAFDPANFVQLNSNYYNENLNGNEGNEQVLDFDGEDGEKVDCYICYKSFPTEDHLIRHQRNAHKSDQIVSLGDAAGSGNTLSVNGNGNRAQYHLFFVCEICGSSHSSKWERWLHINNTHNNESSIKCEWENCGKIFATKSLRNEHLQHHAVQGPSPNTCEICGKLWPTRVDYWKHVMGVHADTVPLICGVCLKVFSDVMQLSAHVKAKHWPLTSGDFCCDICGRPYSNKSKMSRHRKIHGLEAAMDAACDNSSFNETTNESVKPDHNNGASEIELSCDQCPELSFTTLDSLCNHRRIAHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHADVTCPYCAKTSASRDHLAAHIAKIHRYMPAMGKDNQNCVASKSLSVDDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCDHPSCKKLFRTKEDLESHRKDHKYHNNPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEAEHSSVLSNPNTCQVCGKQYASKWKAFDHTKKCHGKVFLTCKQCLAVFTDENDIRDHYEHVHNVPKDQLAIFEYRMDIGVKREGYETPDIIVKEEPDDLDFDEEMCDESSNDSRKRRRSPNDTYDCEMCPEIFLNSDTLAKHYQNVHNTDPVRMFKKFKKDSDSKRKMRNRNNFECKNCKKQFSTKTLFWNHINLCTRRNSIGRFDIPNNVPTSILESHLKNNNQIQREELPLTNESNLNIPDFNLFEDINLQLSAQKPVPNLMPLSQVKATGNGKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKSYQDLADHLKAEHAPVLSPEGNNFTCKTCGRYHNARSKLMLHTGIHIGNYQCQKCLQFLESEEKLTEHATSCNGKSEFEGHAVADEDNAKNDNDEKGSLIADETSVIEDAEEAEEADFESEGERSRDIHDEDNSENSEEDNSENSDDSDSDSNSSSSEDENENEDGEEEEENENENESDTRSTSRESGDSVSCNSESDDESDMDEAEVNATEKKALQLSDIGRFRMHGDGIQENMPIEKNAKDQKTDLTSVTAATVAGQTKQSNLNDLLIPNAPANMDKFEAFCLEESAKAATSDVDLSDDNEDDDDNEEEDEENNENEEEEDGEDGEDGEDGEDGGGDEDEDEDEDEDEDEGEAETEADESENDNENVGEAAAEEEEEEEDEDDDDDDDGPPVLSPIMPLLPENESEEHSGMTDRTRHKLSPMVSLSMTKDLEKCEITEMQNDVENVSNAANLFAANNNDLPVTWDENLDDNGIDNSDCNSDIGDRNVEKNEEFSEEYCKIEVKYEGDDFGENSAYENVVDNTREGDGNNQVHEVHNLDGTVLMVTNDAEGNQILIEQNVLGIDNEDSNAEAAQYIYPENAYEIEGEDYTTRNETDVGDRNVEKNEEFSEQYCKIEVKYDGDDFEENSAYENVMDNSREGDGGDNQVQTDEMQGSISYVQHTLENEDNNTEDDIEENSSDVQKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01355612;
90% Identity
iTF_00385774; iTF_00765838;
80% Identity
-