Lace005430.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leptothorax acervorum
Gene Symbol
dl
Assembly
GCA_035220615.1
Location
JASTWQ010000029.1:564031-567137[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-74 2.9e-70 237.1 0.0 1 169 43 212 43 212 0.99
2 2 0.88 8.7e+03 -2.1 0.0 11 37 461 486 458 500 0.75

Sequence Information

Coding Sequence
ATGGAACAATACAATGGTATAAGTGATGGAGATATTAATATAAGTGATATCATTGACGTCATTCAAACGACCGATCCTGGTTCTATGGCCACTATAGCGATGGACAACGAACACGTTCAGCCGCATGTTGAGATTTTAGAACAACCGGCCGGTAAAGCGCTACGGTTTCGCTATGAATGCGAGGGCAGATCGGCTGGCAGCATACCTGGTATCAATAGCGCGCCGGAGAATAAAACTTTCCCTAGTATACGAATCGTGGGTTATAAGGGTCGTGCTATGGTGGTTGTATCCTGCGTAACAAAGGATGCCCCATATAGACCTCATCCACACAATCTTGTCGGCAAAGAAGCATGCAAGCAAGGTGTTTGTACGATTGAAGTTCCGGCGGGAAATATGattatttcattttcaaacCTAGGCATTCAATGTGTAAAAAAGAAGGACATCGAAGAAGCTCTCAGAGTGCGTCAGGAATTGCGAGTGGATCCCTTTCGAACTGGTTTCGAACATAAGAGACACCCGACTAACATTGATCTAAACGCAGTGAGATTGTGTTTCCAAGTTTTCCTGGAAGGCAAGACAGGAAAATTCAACAAGCCATTACCGCCCGTCGTGTCTGAGCCTATTTATGATAAAAAGGCAATGTCAGATCTTGTGATTTGCAAATTGAGCCATTGCAGCGCATCGGTCGCTGGTGGCATGGATATGATTTTGCTGTGTGAAAAAGTCGCGAAAGAAGATATACAAGTGAGGTTTTTCGAGGAGAGAGACGGACAACTACTGTGGGAAGGATACGGCGATTTTCAACCGACACATGTACATAAACAAACGGCAATAGCATTCAGAACGCCTAGCTATCGTACGCAGCAAGTGGAACAGCCGGTGCAAGTGTACATCCAACTCAGAAGGCCATCGGATGGTACTACGAGCGAACCGCTACCGTTTCAGATGTTACCACTAGGTACAGGTAGGCCTGCTTTCTGGTCTTTACGGAAAGCATTTGCCAGGAAGAAGGCAGATTACAATACCTTCAGTAAAATCTTGTCTACAGAAACTGCTCTTCTTGCCAACGTAACTCCCAAATTTTCTCGTAATATCGACGAATTCAACAATAATGATCTGGACGCGAAAAGACCGAACGATAAAATCTCTGCATTGCGTGCTTTAAACGATTTGTATAACGTAAAACATCACGTAGATCTGTGTAATGGCGATTTAAAGGCGTTAATAAATTCTGCACAGAACGTAGATCAATCCGCGAAAAGTACCGTTTTGGATTGTGAGAATAATGAAATGACGATAGTTCCGGGAAGAAACgtggaaaataataaagaaactaGCAAATTGTATACCTTTGGTAGTAATAGTGTAGATAATAATGCATTTACTGCCGATTATAAAGGCGAGGGAACTATCGGTGCGATTCTTTATGCGAAATCCAATGCACAAGAAGGCAGCACATCCGCGTCGAGAAATGTAGATAATTCGAAGGGTAGGTCAGATTGGTTTGACTATTCTGAAATAGGTAAATGGGTGCAGAAGGGACAAGCGTGCCTTAAGGATAAGACTAATGAGACAGAGACTAAAAACGAGACAGATGGCGGCAAATCGTTTAATGAATTTTTGTCGCAAGTGGCCGAGCTTGATCAAATTTATGCTGATACACATAACAAATTGGTACAAGCTACTACGGATACGATCGTGAATCCACAAATGATGGACATTGATGTCTGCGACAATCAGACCTATACTAGCTTACAAATGGCCATGAAAAATCCGATAGAATTATTCGATATTACCGATGACAGAAAGTACGAAGACGTAGCCGTCCCGAAACAAGATGCGGAAGTACCCGTTGCGTCTCCAACATTAACAGCTAAGAGAGACGTGATGCACGAGGCGGAAGAAAGATTGCCACCCTTGCCTCCGAAGCGAATACGCAAAATGCCGTCGATGCCTCTTTTGCCGCGTCCGATATCCGCTCAAACGCTTACTACCTCCTCTCCCGAGGCGCCGAATAAAAATTTGCCGTCCTTACCCGACACTTTGTCGAAACACGCGAGACAAGGGCTATTTTCGAAATTATTtgctaaaaagaataaaaaagacaaGTATTCTGAATCGGATCTAAGCAGAGACAGTGATCCATCATTGAATACCTCATATTTATTGAAGAGCTCTGTACAAGATGCTGCGCAATCACAAATTCCACGTTCTAGTATGACGAGTGTTACGAGTGTCAAATCTCTCAAGTTAGATGACGATGACACACCACCATATGGTGCAGATTTAACTGAAGCTGAGCACTATGCTCTCTACACTACTATGGCACCACGCGCGACTGCTTCAGAATTTGATGAgatgtctttttattatagtcTAGTCGAGGGTGGGAAAATACTGACAGAAGCGAAAGAGACctaa
Protein Sequence
MEQYNGISDGDINISDIIDVIQTTDPGSMATIAMDNEHVQPHVEILEQPAGKALRFRYECEGRSAGSIPGINSAPENKTFPSIRIVGYKGRAMVVVSCVTKDAPYRPHPHNLVGKEACKQGVCTIEVPAGNMIISFSNLGIQCVKKKDIEEALRVRQELRVDPFRTGFEHKRHPTNIDLNAVRLCFQVFLEGKTGKFNKPLPPVVSEPIYDKKAMSDLVICKLSHCSASVAGGMDMILLCEKVAKEDIQVRFFEERDGQLLWEGYGDFQPTHVHKQTAIAFRTPSYRTQQVEQPVQVYIQLRRPSDGTTSEPLPFQMLPLGTGRPAFWSLRKAFARKKADYNTFSKILSTETALLANVTPKFSRNIDEFNNNDLDAKRPNDKISALRALNDLYNVKHHVDLCNGDLKALINSAQNVDQSAKSTVLDCENNEMTIVPGRNVENNKETSKLYTFGSNSVDNNAFTADYKGEGTIGAILYAKSNAQEGSTSASRNVDNSKGRSDWFDYSEIGKWVQKGQACLKDKTNETETKNETDGGKSFNEFLSQVAELDQIYADTHNKLVQATTDTIVNPQMMDIDVCDNQTYTSLQMAMKNPIELFDITDDRKYEDVAVPKQDAEVPVASPTLTAKRDVMHEAEERLPPLPPKRIRKMPSMPLLPRPISAQTLTTSSPEAPNKNLPSLPDTLSKHARQGLFSKLFAKKNKKDKYSESDLSRDSDPSLNTSYLLKSSVQDAAQSQIPRSSMTSVTSVKSLKLDDDDTPPYGADLTEAEHYALYTTMAPRATASEFDEMSFYYSLVEGGKILTEAKET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00126473;
90% Identity
iTF_01407937;
80% Identity
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