Ldol058695.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leptopterna dolabrata
Gene Symbol
tfip11
Assembly
GCA_954871275.1
Location
OX940983.1:21730288-21733296[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-85 2.8e-81 275.3 21.1 1 275 389 659 389 659 0.99

Sequence Information

Coding Sequence
ATGTCTGATACAGAGTATGAGAAGTTCGAAATCACCGACTATGATTTGGACAACGAGTTCAACATGAACCGCCCTGGTAGGAGGACCTCAAAAAACCAACAAATCTACGGGATCTGGGCGGACGACAGCGATGACGACGGAGATGGTGACGCTAGGCCATCTTTCAGTTCCGGTGGTAAGAAATCTAAAAATTATTCAGCCCCAATTGGCTTTGTTGCTGGAGGCATTCAACAGGCTGGTAAAaagaaagaagagaagaagGATAGTGATGAAGAACGCGAAAAGGATATACCAATATCTGATTCAGAGGAAGACGAACCGCGACCTCGTTTCAAAGCTTTGGACCCGATGGCTGGTGTTTCGGGAGAGATAGCTGGTATGAGGAAGAAAAAGGCGTTTCAGCCTACTCCGATATTGTCTCAAAGGGGTGTAGGCACTTGGGAAAAACATACCAAAGGAATCGGAGCTAAACTTTTGATGCAAATGGGATTTCAGCCCGGTAAGGGTCTGGGTAAAGATCTTCAAGGTATACAAGCTCCTATTGAAGCGTCGTTGAGGAAAGGGCGAGGTGCCATAGGGGCATATGGACCAGAAAAAAGCGCCAAAATCGCTGACATACAGCCTGAACCCAGTAAGAAAGGAGCTGCGAAAAAAGATTCAAAAGAAATTGGCGAAAGATCGTCTCAATGGAGGAAGGGTGATGGCGGGAAGAAAAAGGCCAAGTATGTGTACAAGAGCATAGAAGACGTTCTTTTGGATCAAGGATCCCAGCCTGTGAGGAAGCGTGAATTCAGTGAGTTAGCCAAAGTGAAGGTTATAGATATGACAGGTCCTGAACAAAGGATTCTTTCTGGATATCACGCTATATCAGGTAACCAGAGGCCTTCAGATGAATGGGAAGCCAAGAAGGATAAGACTTACGATAACTTCTCAATGCCGGAGCTTCAGCACAATTTGAATCTTTTGGTTGACATGTGTGAGCAGGATATTATAGCAAAGGACAGACAGCTGCGGTACAACGATGATAGAATGGTGAGCTTGCAACACGAGGCAGAAAAATTGAGAAAGGTTACTGAAAACGAGAGTAATATCATTGATGGACTTGAAAGTCTTTTGGAGACACTCGAGAGGCTCATGAAGGGGGCAAACGAAGGGACAATGACGTTGGAAGAAATGGCTTCAGCTTATAAACTGTTAAGAGATGAACACCCTAATGAGTATCTCATGTATGACTTGCCGTCGCTTGCACCTTCTTTCGTCCGGCCTTTACTGAAAAATACACTCAGTGTTTGGGATCCAATGAAGAATCCTGAACAACCCCTTGGTGAGTTCACACAGTGGCAGCAAGTTTTGAGTGAAACTCAGTCTGCTCATACATTATCGACCGCTACTCTGCAAGATCCATTCCATCTTCTGCTTTGGGATGCTTGGATGCCTTCCATTCGAACTGCTGTGACTGGCTGGAATGTGAAAGAACCACAACCCATGATTATACTACTGGACACTTGGAGACCATTGCTGCCATCTTGGATTTTGGACAACATTCTACAGCAGCTGGTTATGCCTAGGTTGCAGAGCACTGCAGAAGACTGGAACCCTCTTATGGATCCTATACCAGTTCACACATGGACCCACCCTTGGGTGCCTCTATTATCCAAACGTTTGAAAGTCAACGTCTTCCCCATTATCCGCCAAAAATTGTCATCAGCCCTGAATGGCTGGCATCCATCAGACAGCTCAGCACGCCTTCTTCTGATGCCTTGGATGTCTGTGTTCACCCAATCCGAAATGGACACATTCCTCATCAACAACATTCTCCCCAAACTGGGGTTAGTTTTACAGGAGTTCGCAATCAACCCAAATCAACAAATTATGGAGCCATGGAACTGGGTTATGGATTGGTGCTCTCTGGCATCCTCGCCCCTTATGGCTGATCTCCTTGCCAAGTCTTTCTTCCCCAGGTGGCTGCAGGTCCTGACGATGTGGCTCAACATGGCTCCCAATTATGATCAGGTCACTAAGTGGTACACAGGCTGGAAATCCTTGATACCCAACGACCTGAGGGAGCAACCCCCTATCAAAGAACACCTGAGGACGGCCCTGGAATTGATGAGCCGGTCTGTTGGGGGTCCTATCGCCCCACCACCGCCTCCCCCTCCGCCCAGCATTTCCGACCATCCGCGCTTCCAGGGAATGGCTGAAGCTGTTAGAACAGCAGCTCAAATGGTCGACGGATTCCGTGATCTCGTCCAGAAACGATGCGAAGAGAATGGCATCATCTTTCACCCCATTCCAAACCGCTACAGAGAAGCCAAACAAGTCTACAGGTGTGGCAATGTTCAAATGTACATTGATAGGAATGTCATTTTCAGCTGTGATCCTAAAACTAATATGTGGGCTCCTGTGTCCATGCAAACTTTGCTTGATAAAGCTACTTCGTTTAATTGA
Protein Sequence
MSDTEYEKFEITDYDLDNEFNMNRPGRRTSKNQQIYGIWADDSDDDGDGDARPSFSSGGKKSKNYSAPIGFVAGGIQQAGKKKEEKKDSDEEREKDIPISDSEEDEPRPRFKALDPMAGVSGEIAGMRKKKAFQPTPILSQRGVGTWEKHTKGIGAKLLMQMGFQPGKGLGKDLQGIQAPIEASLRKGRGAIGAYGPEKSAKIADIQPEPSKKGAAKKDSKEIGERSSQWRKGDGGKKKAKYVYKSIEDVLLDQGSQPVRKREFSELAKVKVIDMTGPEQRILSGYHAISGNQRPSDEWEAKKDKTYDNFSMPELQHNLNLLVDMCEQDIIAKDRQLRYNDDRMVSLQHEAEKLRKVTENESNIIDGLESLLETLERLMKGANEGTMTLEEMASAYKLLRDEHPNEYLMYDLPSLAPSFVRPLLKNTLSVWDPMKNPEQPLGEFTQWQQVLSETQSAHTLSTATLQDPFHLLLWDAWMPSIRTAVTGWNVKEPQPMIILLDTWRPLLPSWILDNILQQLVMPRLQSTAEDWNPLMDPIPVHTWTHPWVPLLSKRLKVNVFPIIRQKLSSALNGWHPSDSSARLLLMPWMSVFTQSEMDTFLINNILPKLGLVLQEFAINPNQQIMEPWNWVMDWCSLASSPLMADLLAKSFFPRWLQVLTMWLNMAPNYDQVTKWYTGWKSLIPNDLREQPPIKEHLRTALELMSRSVGGPIAPPPPPPPPSISDHPRFQGMAEAVRTAAQMVDGFRDLVQKRCEENGIIFHPIPNRYREAKQVYRCGNVQMYIDRNVIFSCDPKTNMWAPVSMQTLLDKATSFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00930334;
90% Identity
iTF_00386348;
80% Identity
-