Ldol026086.1
Basic Information
- Insect
- Leptopterna dolabrata
- Gene Symbol
- RB1CC1
- Assembly
- GCA_954871275.1
- Location
- OX940975.1:64629103-64661791[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0079 3.2e+02 3.7 0.3 25 44 685 704 682 714 0.70 2 2 4.4e-07 0.018 17.3 0.0 2 42 856 895 855 899 0.95
Sequence Information
- Coding Sequence
- ATGTTGTTCGTATTCCACGTGGACACGGGGACTATGATAACCTTCGATATCAACTTAGCGCTTGAAAGTGTGGGAACTCTAAAGGAAGAAGTGGAGAAGGCGTGCGGTATAGCCGTCGAAAAGCAAGTTCTCCTGATAAGCGGCGGAGAATGTCTGGACGGTTACTCCAGAGTCTGCTCTTATTCTGCTGGAACCGACACCAATCCCATCTTCCTTTTTAGCAAATCTACGATCGAGAGCACTACTCCCCCAAGCCCTAGCATCAATTATGGATCAGATATAGAATTGAAGGATGAGGTTGACCAAGCTCTCAACCTCCCACCGAGCATATCCACAGTGATGGCCCGGTCTCAGCTGGCCCAGCAAATGTGCGAATTGGCCAAGCAGCAAACTGCAGCGTGTGAGAAGTTAGTTCACGACCAACACATGCAGCAGCAAGGATGGGCTGCCGTAATCGCCAATCTAGATGATATCACCTCAGCTTTTAGAAATCGTAGCGAAAATATTCAAACCACTTTTAAACAACACGTAGATCTTAGGAATCAGTTCCAAGCAATCCTTGAAAGTTTCACCAGTGATGTCGATATTCTGACAAAAATACCGCTATTGCCAGCTCTCTTGGACAAAGAAGAATCAGTCAGTGAGACTGCGCCCTCCAATTTGTTCAAATGGATCGCGGCTAAGGACAACCAGGCCTCTGTTGAACAGTTGGCTGATATATGCAAGAAAGGCTTGGAACAGTTCAGTGATGGCCTCTTGGACTCCATTAAGGCAGAAGTTACTTCGGTGCTGGAAGCTGCTAGCAAAAGCGAGCTTCGAGAGATTAAAGGACTCGAGGAACGACTTTATGGCCTTGAGCAACTTAGATGTGATACGAAAAAAATAGTGCAGGAGCAGTCCGATCTGGCACAGGCTTTCCTCCAAAATCAATCGAGGGCATCAAATTTGGGAGACACATCAATTCTTCCTGATCTCTGCACGTCGCACAAAAGGCAGCTAGTCGTGATGCTCAGAAACCACCAGCAGTTGAGGGACATTAGGAAGCGTTGTGTCAGAGCAAAGCAGGAGCTTTCAACCAATCTCTATCATCGCCTCAAGTGGGTCATGTTCGTGGAAAGCAGAATCCTTGAAGTGGATTCGAAATTGGTGATGTATCATGAGAGCATCAAGAGGCTGCAGCGCCAGTTGGAAGTGATATCCCAGATACACAGCGCACCCAACGTGTACCTCACTGCTGTAGCCGAAGTAGTGAGGAGGAGGACTTTCTCACAAGCGTTTCTGATATGGGCCAATGATATTGCTAGTCAGCTGTGTGCTGTCCACTCCGAGGAAGTGGCCAGGAGAAAGGTGTTCCAGAGTCAGTTTGAGGGCCACTTTCTTTCTTCGTTGTTCAAGGGACTGGAGGACTCTCCACCACCGTTTGCCACCCAGGCGCCTCCTTTGTTCGATTCAGAGCTTCCTAAGTTGACATTAGATGACATTGAAAAGCTCCGTAGTGACCTTCCCGATCTCGCCCTCTCAATTTCAGTACCTGATCTCTCTCAAATCACTCAATTTTTCCTCAACCGCTCAATTACGAACCTCAAGTCTGACATCGGGCACCCACCTGCAGCTTCGATTGAAGAGCGTATCGTGGAGGCCGTTTCTGCAGCTGGTTTGAGCTCAAACTTGGATCCTGCTCTCTTGCAACCAGCCGATGGTAGCCAATCCATGTCTGCCAACACGACACATCCAATAAGTAGTGACAGGGGGTTCGAATCCGAAACAGACACTGAGGAGTTTGAGAAAGTCGGTCAAAGTCCTAGTGAAATCACCAAAGATGAAACGGAACTTCGTAGTAATCTCCAATCTCAATTCAACAAGATAAACTGTGCGGTAGAGCAGGCGCTGGGCGAACTCAGATGTAACATGGGTCAACTGCGCCAGTGGGTGCTTTGCGAGAGAACGGAGCTGGAGTTTCTTTTGTCCAAACTGTCTTCAGTATGGAACgaagcaaacgaacggctgtcgCAGGAATATGAGTTGCGTCAGGCGGCAGAAAGAAGGGAAGCTGATCTCGAGAGCAGAATGAAGGCCATTGTGGAAGAAAACGATAAACTCAGGGGCAGGGTCGATGAGCTAGAGGCGGAGTTAGCTGCAGAGCGCGTGACGGTCCAAGAGGTCACCACAAGGCACAAAGATGAAATTGAGGCAATCACTTCTCGGTACAAATTGTACTCGCAAAGCATCGATCGCTCGTGTCATGTTCACGAAAAGATGGAGGGTTGCGAAGTGATGGAAAGATCGGAGCATGACGCTGTCGTGAACCGCATCAGGGAGGAAATGTTGGCTCGGCACATGGTGGCATTGGAGGATGAGCGGAGCAAGTTCAACATCGAGGTCGAGAAAGTCAAACTCAAATCGGATGCTGAGCGACAGGCAAGTATAACAAACTTCaaccagtttttggtttattctGTTCTTTTCAACGAAACTGTTCGACGGTTGGTGATGGAGAAGGACCGTCAGTTGAACGACATGAGGGCTCGAGCATCTGAAATGAATTCGGAGCTGGTCGAGCTAAAAGATCTCGTCAAGCAGCTCAGTACAGCCGTTCGGGAGAACCCAGATTCTCTCCAGCAGCGCGTTGTGGATCTGGAGAGTGACAAATCTCGCCTTCTCGCGGAAATCCAAATTCTGAAAGGAGTCCCCGGGACCACCCCACCCGGAAGCATCAGCCCCTCGTCCTCAGTCGTGATACTGTGCAACCCTGGAGACAACGTGCTGGTTGCATGGGACTACGATCTCTCAGCTTACACAATCTATCAAGACTCAAGCACGCTGTTCGTCCTTCATTGTGAAAGTCTCAGCCTTCTGGGTTTGAATGtgtgGAGAGATGCTTGTGAGGATCCCGTGGAGGTGCAAATTAGGCTCAGGAAGTGGAGATGGTTGGGCCACACTCTTCGAAAGAGTGACACCGCCGTTGAACGCCAAGTCCTGACGTGGAATCCACAGGGGAGACGCAGGAGGGGGCGGCCGCCCATCACTTGGAGAAGGAGCGTGGATATGGAGGCAGCAAGATGGGGGAAATCCTGGGGAGAATTGAAGAGGCTAGCTCAGAACCGTGTCCGCTGGCGGAGCTTCGTTGAGGCCCTATGCTCTGAACAGAGCGACAGGACATAA
- Protein Sequence
- MLFVFHVDTGTMITFDINLALESVGTLKEEVEKACGIAVEKQVLLISGGECLDGYSRVCSYSAGTDTNPIFLFSKSTIESTTPPSPSINYGSDIELKDEVDQALNLPPSISTVMARSQLAQQMCELAKQQTAACEKLVHDQHMQQQGWAAVIANLDDITSAFRNRSENIQTTFKQHVDLRNQFQAILESFTSDVDILTKIPLLPALLDKEESVSETAPSNLFKWIAAKDNQASVEQLADICKKGLEQFSDGLLDSIKAEVTSVLEAASKSELREIKGLEERLYGLEQLRCDTKKIVQEQSDLAQAFLQNQSRASNLGDTSILPDLCTSHKRQLVVMLRNHQQLRDIRKRCVRAKQELSTNLYHRLKWVMFVESRILEVDSKLVMYHESIKRLQRQLEVISQIHSAPNVYLTAVAEVVRRRTFSQAFLIWANDIASQLCAVHSEEVARRKVFQSQFEGHFLSSLFKGLEDSPPPFATQAPPLFDSELPKLTLDDIEKLRSDLPDLALSISVPDLSQITQFFLNRSITNLKSDIGHPPAASIEERIVEAVSAAGLSSNLDPALLQPADGSQSMSANTTHPISSDRGFESETDTEEFEKVGQSPSEITKDETELRSNLQSQFNKINCAVEQALGELRCNMGQLRQWVLCERTELEFLLSKLSSVWNEANERLSQEYELRQAAERREADLESRMKAIVEENDKLRGRVDELEAELAAERVTVQEVTTRHKDEIEAITSRYKLYSQSIDRSCHVHEKMEGCEVMERSEHDAVVNRIREEMLARHMVALEDERSKFNIEVEKVKLKSDAERQASITNFNQFLVYSVLFNETVRRLVMEKDRQLNDMRARASEMNSELVELKDLVKQLSTAVRENPDSLQQRVVDLESDKSRLLAEIQILKGVPGTTPPGSISPSSSVVILCNPGDNVLVAWDYDLSAYTIYQDSSTLFVLHCESLSLLGLNVWRDACEDPVEVQIRLRKWRWLGHTLRKSDTAVERQVLTWNPQGRRRRGRPPITWRRSVDMEAARWGKSWGELKRLAQNRVRWRSFVEALCSEQSDRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -