Basic Information

Insect: Leptopilina syphax
Gene Symbol: ECU03_0790
Assembly: GCA_032872505.1
Location: CM065471.1:43520464-43521444[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00014 0.028 16.2 0.2 2 23 58 80 58 80 0.95

2 9 0.00048 0.094 14.5 1.6 1 23 84 106 84 106 0.99

3 9 0.00042 0.082 14.7 3.2 1 23 112 135 112 135 0.96

4 9 0.00041 0.08 14.7 1.4 1 23 142 165 142 165 0.94

5 9 7 1.4e+03 1.4 0.2 3 11 172 180 170 183 0.84

6 9 0.00012 0.023 16.5 4.5 1 23 200 222 200 222 0.98

7 9 0.00012 0.024 16.4 0.1 1 23 226 248 226 248 0.98

8 9 8.7e-05 0.017 16.9 0.6 2 23 253 274 252 274 0.97

9 9 9.6e-07 0.00019 23.0 1.7 1 23 280 302 280 302 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00014	0.028	16.2	0.2	2	23	58	80	58	80	0.95
2	9	0.00048	0.094	14.5	1.6	1	23	84	106	84	106	0.99
3	9	0.00042	0.082	14.7	3.2	1	23	112	135	112	135	0.96
4	9	0.00041	0.08	14.7	1.4	1	23	142	165	142	165	0.94
5	9	7	1.4e+03	1.4	0.2	3	11	172	180	170	183	0.84
6	9	0.00012	0.023	16.5	4.5	1	23	200	222	200	222	0.98
7	9	0.00012	0.024	16.4	0.1	1	23	226	248	226	248	0.98
8	9	8.7e-05	0.017	16.9	0.6	2	23	253	274	252	274	0.97
9	9	9.6e-07	0.00019	23.0	1.7	1	23	280	302	280	302	0.98

Sequence Information

Coding Sequence: ATGAGACGAAAACCAAGGAGAGAATTTAAAGAGACATTTTTTAATGGAACGAGTGATGAAAATATTGACATTGACGTGAAAATTGAAACTGTCTATCATGGATTTGACGATAAGGTTATTTATTCAAAGAGCGAACCGGACGTCGATCAAGTTCTTGACAATCTTCGAAATACTTGTCCATTTTGTGAGAAACGATTCAAGGATGAGGCGAAAGTTGAGAGGCACGTGAGGGCAGTTCACAAAAGACCTTATAAATGTGACTTGTGCCGGAGATCGTATTTCACCGCCCGAGTTCTTGAGGAGCATCGAAAAACGCACAGCAGTGATTTTTTCTTCGAATGTTCTATTTGTCATCTAAAATATAAACGCGAGGAAGGACTTAAGCAGCATCACATTCGCGTTCACAGTGAGACTGAGGCAAAATTCATGTGCGATCATTGTGGCAAGAGGTACAAATTAAAACTGGATCTTTTGCTTCACATCGGCAGAACGCACATGTGTAATAttcaaatttgtcgattttgCGGCAAGGCTGTGAAGGATGTCAAGGGACACGAGTGGCGACATCAAAAACGTTCACGAAAATCGAATATGGATTACGTTTGTCAtttgtgctttaaaaaatttcgcaGTAAAACAAAACTCGACAATCATTTATTGATGCACAAGGAGCGATACACTTGTCAGGAATGTGGTCTCGAATTATCGGGACCCAGTCAATTGATGAATCACAAACTCAAACATAAACCGGGAATGACTTGCAGAGTGTGCGCTAAGGTTTTTATTTCGAGGAGTAATTTTTATCAACACGTCCTTACGCACGCCGGTATCAGGCCTTATAAATGTGACGTTTGCAATGAGGATTTCACTCAACGTTCGAGTCTTCTTAGGCACAGGAAAAATCACCCTGGACCACTTCCACCTCTTCTCACACCGACGCCAATCGCCGATCTCGCAAGAAAcgttttacaaaaactctaa
Protein Sequence: MRRKPRREFKETFFNGTSDENIDIDVKIETVYHGFDDKVIYSKSEPDVDQVLDNLRNTCPFCEKRFKDEAKVERHVRAVHKRPYKCDLCRRSYFTARVLEEHRKTHSSDFFFECSICHLKYKREEGLKQHHIRVHSETEAKFMCDHCGKRYKLKLDLLLHIGRTHMCNIQICRFCGKAVKDVKGHEWRHQKRSRKSNMDYVCHLCFKKFRSKTKLDNHLLMHKERYTCQECGLELSGPSQLMNHKLKHKPGMTCRVCAKVFISRSNFYQHVLTHAGIRPYKCDVCNEDFTQRSSLLRHRKNHPGPLPPLLTPTPIADLARNVLQKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00980409;
90% Identity: iTF_00881522;
80% Identity: -