Basic Information

Insect: Leptopilina syphax
Gene Symbol: L
Assembly: GCA_032872505.1
Location: CM065471.1:47391220-47401859[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.6e-05 0.003 19.2 1.3 1 23 97 119 97 119 0.98

2 20 0.5 98 5.0 3.9 1 23 125 147 125 147 0.97

3 20 1.2e-06 0.00022 22.8 4.1 1 23 153 175 153 175 0.99

4 20 0.00013 0.025 16.3 0.4 1 23 181 203 181 203 0.98

5 20 0.0011 0.22 13.4 0.2 2 23 351 373 350 373 0.94

6 20 0.36 70 5.5 0.0 2 23 383 405 382 405 0.88

7 20 0.22 42 6.2 0.1 3 23 467 487 466 487 0.97

8 20 0.0052 1 11.3 0.6 2 23 500 521 499 521 0.97

9 20 0.0058 1.1 11.1 0.4 1 23 530 553 530 553 0.93

10 20 1.4 2.7e+02 3.6 0.3 1 23 558 581 558 581 0.91

11 20 0.12 23 7.0 2.3 2 23 651 672 651 672 0.97

12 20 0.0055 1.1 11.2 0.1 1 23 677 700 677 701 0.94

13 20 3.5 6.8e+02 2.4 0.1 2 23 765 788 764 788 0.81

14 20 5.3e-05 0.01 17.5 1.0 2 23 804 826 803 826 0.96

15 20 0.044 8.6 8.4 1.0 1 23 835 858 835 858 0.93

16 20 0.015 2.9 9.8 0.0 2 23 1048 1070 1048 1070 0.92

17 20 0.31 61 5.7 0.2 1 23 1077 1100 1077 1100 0.95

18 20 4.7 9.2e+02 2.0 0.4 2 23 1113 1134 1112 1134 0.92

19 20 0.25 49 6.0 0.0 2 23 1143 1165 1142 1165 0.93

20 20 0.03 5.7 8.9 0.4 1 23 1172 1195 1172 1195 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.6e-05	0.003	19.2	1.3	1	23	97	119	97	119	0.98
2	20	0.5	98	5.0	3.9	1	23	125	147	125	147	0.97
3	20	1.2e-06	0.00022	22.8	4.1	1	23	153	175	153	175	0.99
4	20	0.00013	0.025	16.3	0.4	1	23	181	203	181	203	0.98
5	20	0.0011	0.22	13.4	0.2	2	23	351	373	350	373	0.94
6	20	0.36	70	5.5	0.0	2	23	383	405	382	405	0.88
7	20	0.22	42	6.2	0.1	3	23	467	487	466	487	0.97
8	20	0.0052	1	11.3	0.6	2	23	500	521	499	521	0.97
9	20	0.0058	1.1	11.1	0.4	1	23	530	553	530	553	0.93
10	20	1.4	2.7e+02	3.6	0.3	1	23	558	581	558	581	0.91
11	20	0.12	23	7.0	2.3	2	23	651	672	651	672	0.97
12	20	0.0055	1.1	11.2	0.1	1	23	677	700	677	701	0.94
13	20	3.5	6.8e+02	2.4	0.1	2	23	765	788	764	788	0.81
14	20	5.3e-05	0.01	17.5	1.0	2	23	804	826	803	826	0.96
15	20	0.044	8.6	8.4	1.0	1	23	835	858	835	858	0.93
16	20	0.015	2.9	9.8	0.0	2	23	1048	1070	1048	1070	0.92
17	20	0.31	61	5.7	0.2	1	23	1077	1100	1077	1100	0.95
18	20	4.7	9.2e+02	2.0	0.4	2	23	1113	1134	1112	1134	0.92
19	20	0.25	49	6.0	0.0	2	23	1143	1165	1142	1165	0.93
20	20	0.03	5.7	8.9	0.4	1	23	1172	1195	1172	1195	0.93

Sequence Information

Coding Sequence: ATGCTATTCAAAGGAAATAGTTCTCGATTGGAACTACTAATTGGCAAAATCCAAGCACATAAAGATCCACAATCACCATCTAGAGAGGAAAAGTGCAACATTAAAGGAAAAgaggCCCTTGGAACTGGAAGTTCTTCTTGGCATAGCGAAGACGGAAGACCAACATCACGCAAGGGAGAGGAAACACCATCTTCTTGCGCAACTCCAACTTCCGCGAGTTTTCCCTCTGAACCGGAAGTCGAAACTGAAATCAATCCAATTGTCGATGGTAACAATCCGGCCGCACCGTATCCCTGCCAATTTTGTGATCGAATGTTTCCCAGATTGAGTTATCTCAAGAAACACGAACAGAGTCATGGAGATCAAATGCCATATAGGTGCAGTTGGTGTGCGAGATTATTTAAACACAAGCGAAGCCGCGATCGTCACGTTAAGTTGCACACTGGCGACAGGAGATATCGATGCTCGCACTGTGAGGCAGCATTTTCCAGAagTGATCATTTGAAAATCCACATGAAAACCCACGACACTCAGAAACCGTTTCAATGTACCTCATGCTCACGGGGATATAACACGGCAGCCGCTCTGACATCGCACATGCAGTCGCACAAAAGACACCAAAACACCCAAGGCACCAAACTGGAAGTGGATTTCGGCCGCAGGAGCGTCTCCTCGCACAGTACAGCGTCACCCCCAATTCCAAATTCGCCGTccccaaatttaaatttaactgtCAACAATCACAAATCGATGAAATCACAGGCAAGTGCCTCGAACACGCCAATCTTGTCGCCTTTGAAGCTGACCTGCATGTACTGTACACGTGATTCCTTCACCAGCATGCAACAGCTTCAACTTCACGTTCACACCATGCACCAAGCAATTCTAAGTGGGGAAAATCTCATGCCATCCCCGGGCCCAACAGCCGATTTATCGAGTCACCAGAAAACTGATCGATTAGACAGAAGTAGAGAAGTTATTTTTTATGCGAAAAAGTTTCCAGAAGAGAGGCCATTAGTACAGGACAAAGAATTATATGAGGCGGGACTTTCTTGTGGTCAGTGTACTATGAAGTTCTCGTCTCCAAATTCGTTACGCGAGCACTTAATTTCCattcatcgagtcgatggattTGGATCGTTAATGGTTTGTCCACTGTGTGGAATTCCCTGCGCGTCTGCAGCTGCTTACGCCGAGCACTATGTGCTCCAACACTGCGAGGACAGAAGATTGTCCGGAGAATATGGCGATCCGAAACTCAACGGATCCTATGACATCAAGCAGTTGAGGAATCAAGACCGAGCGAAAATTGGAAAGGACTTATTAACCTTCGAGCCGGCGGACTTGACCAATAAACACCTGAAACCCCCTGAAAATTACTCGGCCGGAACATTGTTATGTGGACAATGTGGAGCAGCTCTCAAGGATTTTGAATCGTTCAGAGAACATTTAGCCAGACATCTTAAAGCAGATCAGAAAAATGAAACACCCAGGAATCAGTGTTCAAAATGCGAGGCAAGTTTTCCGAATAGGGAAGAGATGTTGACCCACTTGACAAAGCACTTCTTGGGACAAGTCACCAAGGAGTACGCTTGCAATGCTTGTAAAAAGTTGTATCCCCATCCTGATCTTCTTCAGCGGCACTTGCTCGACTCACACGCGCATCATCTCTACCGTTGTTCTCTGTGCAGAGACACTTTTGACTCCCGGGTAGCAATCCAAGTGCATTTTGCCGTAAAGCACAGTCAAGAGTGTCGCATCTACCGATGTACTGTTTGCTCAGGATCCAACAATGAAAACTCCCCCGGAAATGCTCCAGTGGAGAACATGAACTTCTTCAGAAGTGAGGCCGAGATGGCGAATCACGTCAGAACAGTTCACGCACCACCGTCCCATGTGAACGAGAGTCCACTACCCAGGAGTCCCGCTTCGACTCCAGGTATGACAAATCGATGTGTTTTCTGTGGAATCTGTTGTACCTCCGACTTGGACCTTCAGCTTCATATGGCGAGTCATTCGACAAGTTTGTACCGCTGTCCTATTTGTCGTGAAGGTTTCGCAGTGGAATTTCTACTAGACAGACATATTGCTCAAGTTCATCATTCCAATGATCATTCGAGAAGCCACGCGAGAGAAAATGGGAGGATTCACCGACCTTCTAGATCTCAGGAGGATGTTAATTCTGAGTCCAGAGAGCAGCGGACGAAACGTGGACGTTCTCCAGCGTCGAGCAACAATAACTCCCTAAATCAACGGGATAACAACAAGAGACCGAATTATGGAAACGTTCAACAATGCGAACTCTGCGAACGAGGGGAATTCGCCAACGAGGCAGAACTTCAAGCTCACAAGAAGTTGGCCCACGCTCCTGCGAAAGTTCAGGGAAAATCAATGTCAGCTCTGAGTATGACTTGTGCGTATTGCGGAGAAGTTTGTCGCTCGCGAAGCGAATTGGAATCACACACGAGAATTCAGCATGCTACGAGCGAACACGGTGGTCGACACAAGTGCAACATTTGCGACGAAGTCTGTCCATCCGGAGCAACATTGGCTGAACATAAACTTCAAAAACACTGCAAAATCCAGTTGAGCGATGTCTGCATCGTCTGTCGGGGTACTTTACACTCCGAATCTCAGTTTCTCGAGCATGTTCAGAGACACAGTCTGGAAAGTGTTGATCCCCAACAGAGATTGGACAGTTCCCTTCCTCACTTGCCAGCTCCATGTGTCGTTTGCAGGCAGACTCTAATAAGCGATCTCGAGGTCAGACTCCACGCGAGGCATCATCTAAGATCAAGCGGAGGATCCCAAAATTCCGAAAGTCCAAGTCCCAAACACAATAAGTCTCAAAGTCACAATTGCTGTCTTTGTCTCAGGGAATTCAATGGAGAAGAGTTTGTTAGTTTGCCATCTAATCATTCATCCAATTCGAGTCAAGCCCTTCTGTTTGTCTGCAAAGCTTGTTACATGAGGCACTCGCAAGGTCTTCCGATTCTGAACACCGCTTATGAACACGCGAGGTCCAGTAAAAGCGAGATATGGCTGAAGGAGACGCATTGGGAAAGTACTTCCAGAGAGAAGTGGGATGGAAATTATAAAGTTGAGGAGAAGAATTCTGATGTTACCTCGAACGATGGGAGAAGATGTGAAGAAtgcaatattaaatttgaagatcCGGATGAAGCTGAGAAACACCGAATAGCTGAACATGAGAAGCCATTGGGAACGTATACTTGCATTCAATGTCAGGTGTCCTTTCCAACAGAagataaaattcaagaacatgTAAAGAAGGAGCATCTGGAATCTTCTGGTAAAGAATCACTGGATGCTTTACGCTGTCATCTATGCTTATTTGATGCCAATAGTCCCCTGCAACTTCAGAGTCACCTGATAGAGCACACTTTTGCCGGATGTACCGCGTTAAGTTGCTATATTTGCCAGGCTTTGTTTACAGCTCCAATTGGACTGCAGaatCACATGATCCAGCAACATGGATTAGGAGCCAGACCATACGATTGTACCTATtgtgaactaaaatttttcttccgaGCCGAACTTGATCAGCATATAGGAGTTTATCATTCCGCACGAGAACCATCACCACAAGATATTAAAAAAGTCGAGGACGGTACTCAGGATACTAATTTCGAACAAGAACAAGAAATTCTTAAGAAAGTAACCATAAAAGAAGAAATTGGCCAAACTAATGAAGATGAAGAAATTAGTGTTGATGTTAATGAGGAATTTGAAAATCATGAAACAAACTctgttaatttagaaaataaatctgACAAAGTTCATTCTGAACCTATCAATGAATGCGAGGCGTAA
Protein Sequence: MLFKGNSSRLELLIGKIQAHKDPQSPSREEKCNIKGKEALGTGSSSWHSEDGRPTSRKGEETPSSCATPTSASFPSEPEVETEINPIVDGNNPAAPYPCQFCDRMFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDTQKPFQCTSCSRGYNTAAALTSHMQSHKRHQNTQGTKLEVDFGRRSVSSHSTASPPIPNSPSPNLNLTVNNHKSMKSQASASNTPILSPLKLTCMYCTRDSFTSMQQLQLHVHTMHQAILSGENLMPSPGPTADLSSHQKTDRLDRSREVIFYAKKFPEERPLVQDKELYEAGLSCGQCTMKFSSPNSLREHLISIHRVDGFGSLMVCPLCGIPCASAAAYAEHYVLQHCEDRRLSGEYGDPKLNGSYDIKQLRNQDRAKIGKDLLTFEPADLTNKHLKPPENYSAGTLLCGQCGAALKDFESFREHLARHLKADQKNETPRNQCSKCEASFPNREEMLTHLTKHFLGQVTKEYACNACKKLYPHPDLLQRHLLDSHAHHLYRCSLCRDTFDSRVAIQVHFAVKHSQECRIYRCTVCSGSNNENSPGNAPVENMNFFRSEAEMANHVRTVHAPPSHVNESPLPRSPASTPGMTNRCVFCGICCTSDLDLQLHMASHSTSLYRCPICREGFAVEFLLDRHIAQVHHSNDHSRSHARENGRIHRPSRSQEDVNSESREQRTKRGRSPASSNNNSLNQRDNNKRPNYGNVQQCELCERGEFANEAELQAHKKLAHAPAKVQGKSMSALSMTCAYCGEVCRSRSELESHTRIQHATSEHGGRHKCNICDEVCPSGATLAEHKLQKHCKIQLSDVCIVCRGTLHSESQFLEHVQRHSLESVDPQQRLDSSLPHLPAPCVVCRQTLISDLEVRLHARHHLRSSGGSQNSESPSPKHNKSQSHNCCLCLREFNGEEFVSLPSNHSSNSSQALLFVCKACYMRHSQGLPILNTAYEHARSSKSEIWLKETHWESTSREKWDGNYKVEEKNSDVTSNDGRRCEECNIKFEDPDEAEKHRIAEHEKPLGTYTCIQCQVSFPTEDKIQEHVKKEHLESSGKESLDALRCHLCLFDANSPLQLQSHLIEHTFAGCTALSCYICQALFTAPIGLQNHMIQQHGLGARPYDCTYCELKFFFRAELDQHIGVYHSAREPSPQDIKKVEDGTQDTNFEQEQEILKKVTIKEEIGQTNEDEEISVDVNEEFENHETNSVNLENKSDKVHSEPINECEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00980419;
90% Identity: iTF_00882439; iTF_00880713; iTF_00881518;
80% Identity: -