Basic Information

Gene Symbol
ZFX
Assembly
GCA_032872505.1
Location
CM065471.1:4958140-4964662[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.7 3.3e+02 3.4 0.1 3 23 12 32 11 32 0.94
2 15 0.31 60 5.7 3.6 1 23 847 870 847 870 0.95
3 15 3.2e-05 0.0061 18.3 0.6 2 23 951 973 950 973 0.96
4 15 0.0052 1 11.3 0.1 2 23 986 1007 986 1007 0.98
5 15 0.00011 0.021 16.6 1.9 2 23 1010 1031 1009 1031 0.96
6 15 0.0022 0.44 12.4 0.3 1 23 1037 1059 1037 1059 0.96
7 15 2.5e-05 0.0049 18.6 4.5 2 23 1066 1087 1065 1088 0.95
8 15 0.33 65 5.6 3.7 5 23 1101 1119 1100 1119 0.97
9 15 2.3e-05 0.0044 18.7 1.5 3 23 1126 1147 1125 1147 0.97
10 15 0.01 2 10.4 0.3 2 23 1163 1183 1162 1183 0.97
11 15 6.8e-05 0.013 17.2 0.7 1 20 1189 1208 1189 1211 0.92
12 15 3.3e-05 0.0063 18.2 2.8 1 23 1219 1241 1219 1241 0.99
13 15 0.0024 0.46 12.4 3.2 1 23 1247 1269 1247 1269 0.97
14 15 4.3e-06 0.00083 21.0 3.9 1 23 1275 1297 1275 1297 0.99
15 15 0.00044 0.085 14.7 7.0 1 23 1303 1325 1303 1326 0.96

Sequence Information

Coding Sequence
ATGGATTACGGGAGCAGCATGGGGCCTGTAGCATGTCCAGTTTGTACTCTTTATCTACGAGAAGGAATCAGTTTACAAAAACATTTGGATACACATCCGAAAGAACAAGTAATTGAGGCTCTTATAAAAGCCAGTGGTGCATCCGTCCCAAATCAGATACAGGAGCCCCAAAGTCAGATATCACCATTACCAAGTCAGATATCACCATTACCGAGTCAGATATCACCAATACCAAGTCAAATTACTTCTCCGTCACCAGTGAATTCCGCCTCTCATGTTTCGCCTCAGTCTCCTTATCCAGTAGGTCCAGTTTTTGAATGCCCATCAACTCTAAATGCAGTTATCTCGCCACCACAATTCGCTTCATTCAGTTATCAACAGTTCGTCAATAATGGAACTGTCATGATACCTCAGTACGCGATGGCACCACAGAATAATCATATGATGCAAATGCTCTATTCTCCATATGGCATGTATCATCAGCAACCAATCTCAACCATGCAAATGATTTCACCTCTTGCTCACACAACGCCCCCTGCAACTGACAGCACAACAAATTCCACCATCAGATACAAGTCTCCGAATGCTTTAGCAGGAGTTGATTCTGTCATCAAATTGACTTCACCTGAAAAATCGTACAATTGTCCTGAACCTAGACCTGTTATATCGGAAATTTTAGAGGATACTGAAGCCTTGCTGCCTAATACAGACATTGATTTATCATCCCGTTCACCTGTTAATAAAGAACGGCCGGCCAAATGTGATAGAGTAACTAACGATCAAGTCAGAGTTGAGTATCGGGAACAACAAACACAAGCTTCTAATGAAGATGATCGCAGTGAGGAATTACCAACAGAACAACAAAATTACCCGGAAACTGCAAATCTTGAAGCAGAAAATAATGAGAATAGAATATTTCCGAATTTAGAACAAAAAGAAGCAGTGACATCTGAATTAATAATCGAAGATAGTGATATGGTTGTCGATAAAACATCTGATGATGCTGATGTTGAATTACCTGCTGATCCGATGGATAAAGAGGAGACTGAAAAGGAGACCGAAAGTGAGAAAACAGAAGAACAAGAACTGGAGAAGCAGACAGCGTGGAATAGTTTTAAGGAATCTTGTGAAGATGAAAATGACCAAAGTCGGAAATCACCTGAGGTGGAACAATTAGAACATCTTTTGATAACAATCATAGAATCAGACTATGATGCCAGTACTGCACGCAATACCGATGTGCAAAAAGTTCTAATTTCCACGGATATTTTAGAAAGAAGTGAAAATACAGCCGACAGTGATAGCACCGATACTTCTGATTTAAACAAATCTTCCACAACTGACAgtaatttatcaattaatttactCGAGAGTAAAACCTATCACTATAAGCACAGTTTGTCAGCGCCTTCATCGCCAATTTTCTTCAAGAAATCTCATAGAACTCATTCGCGCCTTTCATTAAGAGATGACTTCCGATCAAATGAAAACATCTCTGCGTATCCTTTGGGATTCGAAGCAACGgctttagaaaattttgtcaatagaAAAAATGAAGAGGATCCCGATGCCGATATGGAGGAAGTTGCTTCCACTGTGCTATTCAAAGAATATCACGAAATTGAAGATGAACCTATGAGATCATACACACCATCATCAATTGGAAGCAGCAATTCTGTCCTGCGAGTGCGAACAGATCTCAATAAATCTGGACCCCTTTTGTCGAATCATCTACTCCATCAAACCATCAATGTGGATGAAGTGATAtacgagaaaattaatttcccaCAAATCGAATCATCTCCCGAGGAAAATTTGCCCAGTACGATTATTCAAGAGAACATAAGCAATAAAGAATCCGAATCAGAGAAGTTGAAAATAAAGGATGAGAAACGAATGACATCAAAAGAAAGTGCCACAGTTCATAATTCTCATAATCAATTGACTGATAATATAGCGGAGAATACATCTCGTCACAtagtatcaaaaaatttagatttcgaTGAATCTAAtggaaattcaaattcaaaacccGCTGAATCCAACAAAATGGTCTTTCAAAAGCCAGCACCGgaactttttaatataaatgaagATGCTCACAGTGGTCCAATGAATGTTTTTGAATTTGATGGTTTGCAAATATTGGTACCAAGTACTTTTATAAGTGAACCCTCCGATAAGGCAATCAGCGGTACGAGTCAACAATCAATGTCCAGCAGCGAAGGAGGAACTTGCATAgatgaagaaattaaaagtatCAATATGCGAGCAGATGAAAGTATGCCACCAAGAGGGGAATTGTCGGAGCAAGAAAGCAATGAATGTACTGATCAGTCTACTTGGCAGATTTATATTGGTCAAGAAGCTTCACGTATGTCAACATCATATGATCTCATGGCGCGGGAAACTTGGGAAGAATCAGAAGGTTCAGACAATGAAATTGGAGGATCTCTTCTGGATTCTAGATCACTAGCTACGCATTTTACATCGAGCTTGTTTTTAGATCGTGATCGGAAAACGCCCACACGGCGAATTTTCAAGTGTACACATTGCACAGAGGTTTTTGAATGCCCCAAGGAACGCAGGGTTCATATTACAACAGTCCACAAAAATGCCGGTGCCAGTAACAGTAGGGAACCCATTCAACAAGCCGAAATGAAGGACATTAAATTGCTGGATGGACGCATGAATATGTTTGACGACATTTTCGTAGCTGGATTACATGTACCACAAACATATCATCAACCTTTGTTACATCAACTCCAACCACCGCAACAATTGGACGAGGGACGAGTTGAAACTGACATAAAAGTAGATAATTTGAGAGTTTCAAACACAATTGAAATTTCATGCAATATTTGTAACCAAAGTTTCTCCGGTGAAAAGTcattgcaaattcatcaaagaagaATGCATATTAAAGAAGCCGTGAAGCGCGTTCGGGAAAATGCCAAGTGTCAAATTTGTAATCAAGAATTTCCTTCGGTTATTTTGTTCAATGCTCATTTAAAGATTCATCCCCTAGAATGCGGCCAGTgtggtaaatatttttataggaAACAAAACTTCAAGTTGCATGTGAAGCGACATCTTGGAATAAAACCATTTCCTTGTACAGTGTGTGACAAGGCTTTTCTCACGAAACAAAAGTTGGAAGAACACACCAACGGCCATACTGGCAACGCTCCTGTCAAATGCAATCTATGTAACGAAACATTTCGACGCTATTCAAATTTAACACAACACAAGAACAGACATCATTTGCACGTGAAGAAAAAGTTGAAGGACTACATTTGCCATTGCGGGGAGATATTTCACACGAAGAAGAAACTGGCATGGCACAAGGAGACTCACGATGAAAAACCAAAAGCATGTACATACTGTAACGAGAGATTCATTCATATGGCCAGTCTAACTCGCCATATGCGTCGCGCTCACAACCGAAGGTTCGTTCCTGATGCTCAAAGAGAAAGTGAAAATGTAGAATGTCCGATATGTAAATGCATTTACTTACGATCATCATTAGCTGTACATATGAGAGTGCACAATGGAGAGCGACCTTACGAGTGTCAAGTTTGTTCTAAAGCATTTAGTACGAAGTGGAATTTGCAGCTGCACAAGTGGACGCATGCGGCACGAAGTACTAAACCATTCAAGTGCAATCAATGCAATGCTGCTTTTTATCGACACAGTGATTACACAGCACACATGAATTCTCACAGGAATGTTCGTCCATATACGTGCAATTACTGTGGGGCTCAGTTTATTAGAAAATACAATTGCCTTAGGCATGTTAAAGAACACGAAGAAAATAAAGCTTATACATGTGATGTttgtaataaaacttttcataGATCGTATTACCTCAAAGAACATTTACGTGTGCATTCTGGTGCAAGACCATATTCCTGTCATATTTGTGGTAAATCAAGTAGCACTAAATCCAATCACAATAAGCATGTGAGAATTCATCATGCACGTGAACCTGTAAATACCGAAAATTAA
Protein Sequence
MDYGSSMGPVACPVCTLYLREGISLQKHLDTHPKEQVIEALIKASGASVPNQIQEPQSQISPLPSQISPLPSQISPIPSQITSPSPVNSASHVSPQSPYPVGPVFECPSTLNAVISPPQFASFSYQQFVNNGTVMIPQYAMAPQNNHMMQMLYSPYGMYHQQPISTMQMISPLAHTTPPATDSTTNSTIRYKSPNALAGVDSVIKLTSPEKSYNCPEPRPVISEILEDTEALLPNTDIDLSSRSPVNKERPAKCDRVTNDQVRVEYREQQTQASNEDDRSEELPTEQQNYPETANLEAENNENRIFPNLEQKEAVTSELIIEDSDMVVDKTSDDADVELPADPMDKEETEKETESEKTEEQELEKQTAWNSFKESCEDENDQSRKSPEVEQLEHLLITIIESDYDASTARNTDVQKVLISTDILERSENTADSDSTDTSDLNKSSTTDSNLSINLLESKTYHYKHSLSAPSSPIFFKKSHRTHSRLSLRDDFRSNENISAYPLGFEATALENFVNRKNEEDPDADMEEVASTVLFKEYHEIEDEPMRSYTPSSIGSSNSVLRVRTDLNKSGPLLSNHLLHQTINVDEVIYEKINFPQIESSPEENLPSTIIQENISNKESESEKLKIKDEKRMTSKESATVHNSHNQLTDNIAENTSRHIVSKNLDFDESNGNSNSKPAESNKMVFQKPAPELFNINEDAHSGPMNVFEFDGLQILVPSTFISEPSDKAISGTSQQSMSSSEGGTCIDEEIKSINMRADESMPPRGELSEQESNECTDQSTWQIYIGQEASRMSTSYDLMARETWEESEGSDNEIGGSLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCTHCTEVFECPKERRVHITTVHKNAGASNSREPIQQAEMKDIKLLDGRMNMFDDIFVAGLHVPQTYHQPLLHQLQPPQQLDEGRVETDIKVDNLRVSNTIEISCNICNQSFSGEKSLQIHQRRMHIKEAVKRVRENAKCQICNQEFPSVILFNAHLKIHPLECGQCGKYFYRKQNFKLHVKRHLGIKPFPCTVCDKAFLTKQKLEEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLHVKKKLKDYICHCGEIFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCNAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYSCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00882401;
90% Identity
iTF_00882401;
80% Identity
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