Basic Information

Gene Symbol
ZFX
Assembly
GCA_015476425.1
Location
JABAIE010000048.1:2824961-2840871[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.9 3.9e+02 3.4 0.1 3 23 12 32 11 32 0.94
2 15 0.34 72 5.7 3.6 1 23 854 877 854 877 0.95
3 15 3.5e-05 0.0074 18.2 0.6 2 23 958 980 957 980 0.96
4 15 0.0057 1.2 11.3 0.1 2 23 993 1014 993 1014 0.98
5 15 0.00012 0.025 16.6 1.9 2 23 1017 1038 1016 1038 0.96
6 15 0.0025 0.53 12.4 0.3 1 23 1044 1066 1044 1066 0.96
7 15 2.8e-05 0.0058 18.6 4.5 2 23 1073 1094 1072 1095 0.95
8 15 0.37 78 5.6 3.7 5 23 1108 1126 1107 1126 0.97
9 15 2.5e-05 0.0053 18.7 1.5 3 23 1133 1154 1132 1154 0.97
10 15 0.011 2.4 10.3 0.3 2 23 1170 1190 1169 1190 0.97
11 15 7.5e-05 0.016 17.2 0.7 1 20 1196 1215 1196 1218 0.92
12 15 3.6e-05 0.0076 18.2 2.8 1 23 1226 1248 1226 1248 0.99
13 15 0.0026 0.55 12.3 3.2 1 23 1254 1276 1254 1276 0.97
14 15 4.7e-06 0.001 21.0 3.9 1 23 1282 1304 1282 1304 0.99
15 15 0.00048 0.1 14.7 7.0 1 23 1310 1332 1310 1333 0.96

Sequence Information

Coding Sequence
ATGGATTACGGGAGCAGCATGGGGCCTGTAGCATGTCCAGTTTGTACTCTTTATCTACGAGAAGGAATCAGTTTACAAAAACATTTGGATACACATCCGAAAGAACAAGTAATTGAGGCTCTTATAAAAGCCAGTGGTGCATCCGTCCCAAATCAGATACAGGAGCCCCAAAGTCAGATATCACCATTGCCAAGTCAGATATCACCATTACCGAGTCAGATATCACCATTACCGAGTCAGATATCACCAATACCAAGTCAAATTACTTCTCCGTCACCAGTGAATTCCGCCTCTCATGTTTCGCCTCAGTCTCCTTATCCAGTAGGTCCAGTTTTTGAATGCCCATCAACTCTAAATGCAGTTATCTCGCCACCACAATTCGCTTCATTCAGTTATCAACAGTTCGTCAATAATGGAACTGTCATGATACCTCAGTACGCGATGGCACCACAGAATAATCATATGATGCAAATGCTCTATTCTCCATATGGCATGTATCATCAGCAACCAATCTCAACCATGCAAATGATTTCACCTCTTGCTCACACAACGCCCCCTGCAACTGACAGCACAACAAATTCCACCATCAGATACAAGTCTCCGAATGCTTTAGCAGGAGGTGATTCTGTCATCAAATTGACTTCACCTGAAAAATCGTACAATTGTCCTGAACCTAGACCTGTTATATCGGAAATTTTAGAGGATACTGAAGCCTTGCTGCCTAATACAGACATTGATTTATCATCCCGTTCACCTGTTAATAAAGAACGGCCGGCCAAATGTGATAGAGTAACCAACGATCAAGTCAGAGTTGAGTATCGGGAACAACAAACACAAGCTTCTAATGAAGATGATCGCAGTGAAGAATTACCAACAGAACAACAAAATTACCCGGAAACTGCAAATCTTGAAGCAGAAAATAATGAGAATAGAATATTTCCGAATTTAGAACAAAAAGAAGCAGTGACATCTGAATTAATAATCGAAGATAGTGATATGGTTGTCGATAAAACATCTGATGATGCTGATGTTGAATTACCTGCTGATCCGATGGATAAAGAGGAGACTGAAAAGGAGACCGAAAGTGAGAAAACAGACGAACAAGAACTGGAGAAGCAGACAGCGTGGAATAGTTTTAAGGAATCTTGTGAAGATGAAAATGACCAAAGTCGGAAATCACCTGAGGTGGAACAATTAGAACATCTTTTGATAACAATCATAGAATCAGACTATGATGCCAGTACTGCACGTAATACCGATGTGCAAAAAGTTCTAATTTCCACTGATACTTTAGAAAGAAGTGAAAATACAGCCGACAGTGATAGCACCGATACTTCTGATTTAAACAAATCTTCCACAACTGACAGTAATTTATCAATTAATTTACTCGAGAGTAAAACCTATCACTATAAGCACAGTTTGTCAGCGCCTTCATCGCCAATTTTCTTCAAGAAATCTCATAGAACTCATTCGCGCCTTTCATTAAGAGATGACTTCCGATCAAATGAAAACATCTCTGCGTATCCTTTGGGATTCGAAGCAACGGCTTTAGAAAATTTTGTCAATAGAAAAAATGAAGAGGATCCCGATGCCGATATGGAGGAAGTTGCTTCCACTGTGCTATTCAAAGAATATCACGAAATTGAAGATGAACCTATGAGATCATACACACCATCATCAATTGGTAGCAGCAATTCTGTCCTGCGAGTGCGAACAGATCTCAATAAATCTGGACCTCTTTTGTCGAATCATCTACTCCATCAAACCATCAATGTGGATGAAGTGATATACGAGAAAATTAATTTCCCACAAATCGAATCATCTCCCGAGGAACATTTGCCCAGTACGAATATTCAAGAGAACATAAGCAATAAAGAATCAGAATCAGAGAAGTTGAAAATAAAGGATGAGAAACGAATGACATCAAAAGAAAGTGCCACAGTTCATAATTCTCATAATCAATTGACTGATAATATAACGGAGAATACATCTCGTCACATAGTATCAAAAAATTTAGATTTCGATGAATCTAATGGAAATTCAAATTCAAAACCCGCTGAATCCAACAAAATGGTCTCTCAAAAGCCAGCACCGGAACTTTTTAATATAAATGAAGATGCTCACAGTGGTCCAATGAATGTTTTTGAATTTGATGGTTTGCAAATATTGGTACCAAGTACTTTTATAAGTGAACCCTCCGATAAAGCAATCAGCGGTACGAGTCAACAATCAATGTCCAGCAGCGAAGGAGGAACTTGCATAGATGAAGAAATTAAAAGTATCAATATGCGAGCAGATGAAAGTATGCCACCAAGAGGGGAATTGTCGGAGCAAGAAAGCAATGAATGTACTGATCAGTCTACTTGGCAGATTTATATTGGTCAAGAAGCTTCACGTATGTCAACATCATATGATCTCATGGCGCGGGAAACTTGGGAAGAATCAGAAGGTTCAGACAATGAAATTGGAGGATCTCTTCTGGATTCTAGATCACTAGCTACGCATTTTACATCGAGCTTGTTTTTAGATCGTGATCGGAAAACGCCCACACGGCGAATTTTCAAGTGTACACATTGCACAGAGGTTTTTGAATGCCCCAAGGAACGCAGGGTTCATATTACAACAGTCCACAAAAATGCCGGTGCCAGTAACAGTAGGGAACCCATTCAACAAGCCGAAATGAAGGACATTAAATTGCTGGATGGACGCATGAATATGTTTGACGACATTTTCGTAGCTGGATTACATGTACCACAAACATATCATCAACCTTTGTTGCATCAACTCCAACCACCGCAACAATTGGACGAGGGACGAGTTGAAACTGACATAAAAGTAGATAATTTGAGAGTTTCAAGCACAATTGAAATTTCATGCAATATTTGTAACCAAAGTTTCTCCGGTGAAAAGTCATTGCAAATTCATCAAAGAAGAATGCATATTAAAGAGGCCGTGAAGCGCGTTCGGGAAAATGCCAAGTGTCAAATTTGTAATCAAGAATTTCCTTCGGTTATTTTGTTCAATGCTCATTTGAAGATTCATCCCCTAGAATGCGGCCAGTGTGGTAAATATTTTTATAGGAAACAAAACTTCAAGTTGCATGTGAAGCGACATCTTGGAATAAAACCATTTCCTTGTACAGTTTGTGACAAGGCTTTTCTCACGAAACAAAAGTTGGAAGAACACACCAACGGCCATACTGGCAACGCTCCTGTCAAATGCAATCTATGTAACGAAACATTTCGACGCTATTCAAATTTAACACAACACAAGAACAGACATCATTTGCACGTGAAGAAAAAGTTGAAGGACTACATTTGCCATTGCGGGGAGATATTTCACACGAAGAAGAAACTGGCATGGCACAAGGAGACTCACGATGAAAAACCAAAAGCATGTACATACTGTAACGAGAGATTCATTCATATGGCCAGTCTAACTCGCCATATGCGTCGCGCTCACAACCGAAGGTTCGTTCCTGATGCTCAAAGAGAAAGTGAAAATGTAGAATGTCCGATATGTAAATGCATTTACTTACGATCATCATTAGCTGTACATATGAGAGTGCACAATGGAGAGCGACCTTACGAGTGTCAAGTTTGTTCTAAAGCATTTAGTACGAAGTGGAATTTGCAGCTGCACAAGTGGACGCATGCGGCAAGAAGTACTAAACCATTCAAGTGCAATCAATGCAATGCTGCTTTTTATCGACACAGTGATTACACAGCACACATGAATTCTCACAGGAATGTTCGTCCATATACGTGCAATTACTGTGGGGCTCAGTTTATTAGAAAATACAATTGCCTTAGGCATGTTAAAGAACACGAAGAAAATAAAGCTTATACATGTGATGTTTGTAATAAAACTTTTCATAGATCGTATTACCTCAAAGAACATTTACGTGTGCATTCTGGTGCAAGACCATATTCCTGTCATATTTGTGGTAAATCAAGTAGCACTAAATCCAATCACAATAAGCATGTGAGAATTCATCATGCACGTGAACCTGTAAATACCGAAAATTAA
Protein Sequence
MDYGSSMGPVACPVCTLYLREGISLQKHLDTHPKEQVIEALIKASGASVPNQIQEPQSQISPLPSQISPLPSQISPLPSQISPIPSQITSPSPVNSASHVSPQSPYPVGPVFECPSTLNAVISPPQFASFSYQQFVNNGTVMIPQYAMAPQNNHMMQMLYSPYGMYHQQPISTMQMISPLAHTTPPATDSTTNSTIRYKSPNALAGGDSVIKLTSPEKSYNCPEPRPVISEILEDTEALLPNTDIDLSSRSPVNKERPAKCDRVTNDQVRVEYREQQTQASNEDDRSEELPTEQQNYPETANLEAENNENRIFPNLEQKEAVTSELIIEDSDMVVDKTSDDADVELPADPMDKEETEKETESEKTDEQELEKQTAWNSFKESCEDENDQSRKSPEVEQLEHLLITIIESDYDASTARNTDVQKVLISTDTLERSENTADSDSTDTSDLNKSSTTDSNLSINLLESKTYHYKHSLSAPSSPIFFKKSHRTHSRLSLRDDFRSNENISAYPLGFEATALENFVNRKNEEDPDADMEEVASTVLFKEYHEIEDEPMRSYTPSSIGSSNSVLRVRTDLNKSGPLLSNHLLHQTINVDEVIYEKINFPQIESSPEEHLPSTNIQENISNKESESEKLKIKDEKRMTSKESATVHNSHNQLTDNITENTSRHIVSKNLDFDESNGNSNSKPAESNKMVSQKPAPELFNINEDAHSGPMNVFEFDGLQILVPSTFISEPSDKAISGTSQQSMSSSEGGTCIDEEIKSINMRADESMPPRGELSEQESNECTDQSTWQIYIGQEASRMSTSYDLMARETWEESEGSDNEIGGSLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCTHCTEVFECPKERRVHITTVHKNAGASNSREPIQQAEMKDIKLLDGRMNMFDDIFVAGLHVPQTYHQPLLHQLQPPQQLDEGRVETDIKVDNLRVSSTIEISCNICNQSFSGEKSLQIHQRRMHIKEAVKRVRENAKCQICNQEFPSVILFNAHLKIHPLECGQCGKYFYRKQNFKLHVKRHLGIKPFPCTVCDKAFLTKQKLEEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLHVKKKLKDYICHCGEIFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCNAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYSCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00883252; iTF_00880678;
90% Identity
iTF_00883252;
80% Identity
-