Lsyp017522.1
Basic Information
- Insect
- Leptopilina syphax
- Gene Symbol
- Spopl
- Assembly
- GCA_032872505.1
- Location
- CM065472.1:1286935-1293384[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.9e-23 3e-20 73.8 0.4 9 109 28 124 23 125 0.89 2 4 1.1e-29 4.9e-27 95.6 0.5 3 109 215 318 213 319 0.95 3 4 2.3e-21 9.8e-19 68.9 0.2 8 107 350 445 346 448 0.89 4 4 4.9e-23 2.1e-20 74.3 0.1 3 80 538 613 536 622 0.93
Sequence Information
- Coding Sequence
- atGTCAGAACCAGATGTGGAGTGTTTGTcaccgaaaattcaaaatgataaTGATTATCGgaaaatttattcgaatttgaaatatttaagcgACTTTAAAATTACTAATCGAGGAAAAACATTTTCTGTTCATAAGgttaTTTTAGCGAAAGAATGTCCTTATTTTCATGAGTTATTTCAAAAGGAAAGAGAAATTAAGAAACTCAATAACCATGATTTGGATATAGATCCGGAAGCATTTAATATCATCCTTCATTACATGTACTCCAATGAATATCCAAATCAAGGTCGATACGATGTTATTCTTGCTGCAGCGGATATTTtacaaatggaaaatttaaaaaatcactgtgaaagaaaattggaaaaagatCTATCTCAAAAAACTGTTTGTCTGCTTTTGACACTTGCTGTAGAAAGTTCTGCAAAACTTCTATTCAATGCTTGCATgtcttttattttaagaaacattcattcAATTGATTTTCAAAGTCTAAAATCTAAGCCACTCGTTGTATTAAGTATGttagaagaatttttcaaaggagAATGGATGACGGATTCTTTTCAAATTACTGAATCTATTAAtctttcattagaaaaaaagattgaaacgaatccgaattattttcaaagaattgattcatttttaaataatgaaaaatatagtGACGTAACTTTTTATGTCGGAGAAAAAACTTTTCGAGGccataaaatgattttatcagcaAAAAGTCCTGTTTTTGATAGAATGCTTTCGAGTGAAATGAAAGAAGCTCTCACGAACGTTGTAGTGATAGAGGACATGGAACCAGAGGTTTTTTACGAAATTCTAAGGTACCTTTATACAGGAGAAGTGAATGTTGAACAATATGCTTTTGAGATTCTAAAAGCTGCCGATTTTTACAATATAGAGGATTTGAAAACgtttactgaaaattatttgGCGAAAAATTTAACTGACGTGAATGTGatGTCAGAAGCCGAGGAGAGTTCGTCATCGAAGATTAATGAAGAATATGAGAAGTCGAAAATTTATACGAACTTGGAATTTTTGAGcgactttaaaattattactcgAGGAGAACCATTTTGTGTTCATAAGgttatTTTAGCGAAAGAAAGTCCTTATTTTTATcagttatttcaaaaagatGGAGAAATTAAGGAACTTAATATCCTTGATATTGATATAGAACCGACAgcatttaataacattcttcattACATGTACTCTAATGAATATCCAAAGCACGGATCATATGATATTATTCTTGCCGCAGCggatattttgaaaatgaaaaatttaaaaaattactgcgaaactcaaatagaaaaattgataacTACGGAaaatgtttgtcaatttttaatattgtcggTAGAATTTTCCGCCAAGATGCTATTCGAAGATTGTATGTCTCTTATTTTGAGAGGTATTGATGTTCTTGATTTTCGTATTCTACAATGTAAACCACTCGTTGTATTAAGCATTTTGGAGGAAATTTTCGAACGAAGATGGATGATGGATTCTTATGTAATTACTGAATCCATTAATCTTTCATTTGAGAAAAAGATTGAAACGAATCCGAATTGTTTTCAAGGAAtagattcatttttaaataatgaaaaatatagtGACGTAACTTTTATTGTCGGAGAAAAAACTTTTCGAGGccataaaatgattttatcagcaAAAAGTCCTGTTTTTGATAGAATGCTTTCGAGTGAAATGAAAGAAGCTCTCACGAATGTTGTAGTGATTGAGGACATGGAACCAGAGGTTTTTTACGAAGTTCTAAGGTACATTTATACAGGAAAAGTGAATTTTCCTGAAAACTTTTGTGAAATTAAGTTTATTGAATTGAATGAATCAATTAGTGATTATAAAGAGCCTGAAGAAGATTGA
- Protein Sequence
- MSEPDVECLSPKIQNDNDYRKIYSNLKYLSDFKITNRGKTFSVHKVILAKECPYFHELFQKEREIKKLNNHDLDIDPEAFNIILHYMYSNEYPNQGRYDVILAAADILQMENLKNHCERKLEKDLSQKTVCLLLTLAVESSAKLLFNACMSFILRNIHSIDFQSLKSKPLVVLSMLEEFFKGEWMTDSFQITESINLSLEKKIETNPNYFQRIDSFLNNEKYSDVTFYVGEKTFRGHKMILSAKSPVFDRMLSSEMKEALTNVVVIEDMEPEVFYEILRYLYTGEVNVEQYAFEILKAADFYNIEDLKTFTENYLAKNLTDVNVMSEAEESSSSKINEEYEKSKIYTNLEFLSDFKIITRGEPFCVHKVILAKESPYFYQLFQKDGEIKELNILDIDIEPTAFNNILHYMYSNEYPKHGSYDIILAAADILKMKNLKNYCETQIEKLITTENVCQFLILSVEFSAKMLFEDCMSLILRGIDVLDFRILQCKPLVVLSILEEIFERRWMMDSYVITESINLSFEKKIETNPNCFQGIDSFLNNEKYSDVTFIVGEKTFRGHKMILSAKSPVFDRMLSSEMKEALTNVVVIEDMEPEVFYEVLRYIYTGKVNFPENFCEIKFIELNESISDYKEPEED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -