Lsyp017664.1
Basic Information
- Insect
- Leptopilina syphax
- Gene Symbol
- SPOPL_1
- Assembly
- GCA_032872505.1
- Location
- CM065472.1:2825210-2835291[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 5e-28 2.1e-25 90.3 1.5 2 107 2 105 1 108 0.94 2 7 0.26 1.1e+02 4.3 0.1 77 108 109 138 104 140 0.85 3 7 1.3e-27 5.6e-25 89.0 3.5 3 107 183 285 181 288 0.93 4 7 0.7 3e+02 2.9 0.1 77 108 289 318 285 320 0.85 5 7 3.6e-30 1.5e-27 97.2 1.4 2 109 433 538 432 539 0.95 6 7 0.15 64 5.1 0.1 77 108 540 569 536 571 0.85 7 7 1e-27 4.4e-25 89.3 3.0 2 104 745 845 744 848 0.95
Sequence Information
- Coding Sequence
- ATGAAAAGTTTGCAAGAAAATGAAGAATTCAAAGATGTTGCGTTTAAAATAGAGGATGAAAAATTCACCGCTCACAAAATCATTCTCGCAAATCGAAGTCCTGTGTTTGCTGCTATGTTCAAGAACAAAATGTCTGAGGGACTAACATCCGTTGTTGAAATTAATGACATCAAACCAGCAATCTTTCaacaaatgttgaattttatttatacggATCAAGTGGAGAATCTAGAAGAATCagcaattgaattcctatacgTAGCGGAGAAATATCAACtggaaaaacttaaaaatttaagcATCAACAGTCTTAATGACAAACTATCTATTAACACAGTTATTAAGACTCTGGAGGTTGCCGAATTGTATTCACTTGAACTGCTAAAAAATGAATGTCTGAAATTTATCAACGATAAAAGACAAACATGGCTACGTCGAGGAAATTCATTTCATTGTACAATTAATGTCGTTGCTCCTGGTACGACAATAAGACAACTATCGCTTATTgatattgaaaaatgtaatgGACTCatagaaagtaataaaaattttctcgacAATGAAGAATTCAAAGATGTGACTTTTAATGTTGAAGATCAAAAATTCACCGCTCACAAAATCATTCTCGCCAGTCGAAGTTCTGTATTCGCTGCAATGTTCAAGAACAAAATGAAGGAGGAACTAACATCTGTTGTAGAAATAAATGACACAAAACCAGCAATCTTTCaacaaatgttgaattttatttatacggATCAAGTGAAGAATCTAGAAGAATCAGCATTCGAATTATTATACGTTGCGGAAAAATATCaactggagaaacttaaaaatttaagcATCAACAGTCTTAATGACAAACTATCTATTAACACAGTTATTAAGACTCTGGAGGTTGCCGAATTGTATTCAATTGTTCTGCTAAAAAATGAATGTCTTTATTTTATATCTGAGAGAAAGTATGACATTATTGAGACAAAGGAGTTTCAGGAATTATTATTAAGTCGTCCAAAAGATAGTTGTGAATATATAACATTCATTTATGATGGATCATTTGACACTAAAAATTCAGAAGAAGGTGGACGAAAAATTTCTTGGCACATAAGTGGATCAGAAATGCTTCAAACCTTTATCAATAGGACACCAAAGAATTCTCAAACTCCTTCATATTCTTTAGAAACTATTCTAAGTAAGGTCCTAATTAAATGCAGGATTAATGTCATTGCTCCTGGTACGACAATAAGACACGGATCGCTTATTgatattgaaaaatgtaatgGACTAATACAAAATATGAAAAGTTTGCAAGACAATGAAGAATTCAAAGATGTTACATTTAATGTTGAGGATCAAAAATTTACAGCTCACAAAATTATCCTCGCAAGTCGAAGTCCTGTGTTTGCTGCAATGTTCAAGAACAAAATGACTGAGGGACTAACATCCATTGTCGAAATTGATGACATAAAACcagcaatttttcaaaaaatgatgaatttcaTCTACACAGATCGAGTGGAGAATCTGGAAGAATCAGCAGTTGAATTAATATACGTAGCGGAGAAATATCaactggagaaacttaaaaatttatgcATCAACAGTCTTAATGACAAACTATCTATTAACACAGTTATTAAGACTCTGGAGGTTGCCGAATTGTATTCAATTGATCTGCTAAAAAATGAATGTCTTTCTTTTATATCAGAAAGAAAGTATGACATTATTGAGACAAAGGAGTTTCAGGAATTAATGTTAACTCATCCAAATTTATGGacaattatgGCAACGTCTCAAGGATTCATTTCACTGTCCGGTGAAATCACCCACACAGAGTCTTATTGTACCTCACTAGATGTTCATAAATACGAATATAAATGGACAATTACCGATTTCGAATTTGTTTGTCGAAAGgacaaaaaattactaaacgTTAAAATATCATTTGAAAGATTCGACACTTACCCCTCATATGCACTCTGCGTCAAATCATTTAGCACCGATAATTTATATCGTTGCGAGAAAAGAATTTCTTGGAAGACAAATGGATCAAACGTTTACCGATCGTTTGTCGAAAAAAGACCAAAAAACACTTCGGGAAATTACACAACACCCAAAGTAATTCCAACCGATATCACAGTTAAATGCGAGGTCAGTATAATTTACCCCGGtgcaattttacttaaaacaccGCTTATCGACATTCAATGCTGCAATggaatagtgaaaaaaattgaaaacctcCTCGACAATGAAGACTTTAAAGATGTGACTTTTAATGTTGAAGATGAAAAATTCACGGCTCATAAGAATATTCTCGCAATTCGCAGTAGTGTCTTCGCTGCAATGTTTATGAATAAAATGAGTGAGAAACAAACATCGGTTGTTGAAATTGATGACATAAAACCAGTGATTTTTCAACAAATGCTGAATTATATTTATACGGACAAAGTGGAGAATTTAGATGACGCAGCATTTGAATTTCTTTACGTTGCGGAGAAGTATCAATTGGAGAATCTTAGGATTATGTGCATCAACagttttaaactataa
- Protein Sequence
- MKSLQENEEFKDVAFKIEDEKFTAHKIILANRSPVFAAMFKNKMSEGLTSVVEINDIKPAIFQQMLNFIYTDQVENLEESAIEFLYVAEKYQLEKLKNLSINSLNDKLSINTVIKTLEVAELYSLELLKNECLKFINDKRQTWLRRGNSFHCTINVVAPGTTIRQLSLIDIEKCNGLIESNKNFLDNEEFKDVTFNVEDQKFTAHKIILASRSSVFAAMFKNKMKEELTSVVEINDTKPAIFQQMLNFIYTDQVKNLEESAFELLYVAEKYQLEKLKNLSINSLNDKLSINTVIKTLEVAELYSIVLLKNECLYFISERKYDIIETKEFQELLLSRPKDSCEYITFIYDGSFDTKNSEEGGRKISWHISGSEMLQTFINRTPKNSQTPSYSLETILSKVLIKCRINVIAPGTTIRHGSLIDIEKCNGLIQNMKSLQDNEEFKDVTFNVEDQKFTAHKIILASRSPVFAAMFKNKMTEGLTSIVEIDDIKPAIFQKMMNFIYTDRVENLEESAVELIYVAEKYQLEKLKNLCINSLNDKLSINTVIKTLEVAELYSIDLLKNECLSFISERKYDIIETKEFQELMLTHPNLWTIMATSQGFISLSGEITHTESYCTSLDVHKYEYKWTITDFEFVCRKDKKLLNVKISFERFDTYPSYALCVKSFSTDNLYRCEKRISWKTNGSNVYRSFVEKRPKNTSGNYTTPKVIPTDITVKCEVSIIYPGAILLKTPLIDIQCCNGIVKKIENLLDNEDFKDVTFNVEDEKFTAHKNILAIRSSVFAAMFMNKMSEKQTSVVEIDDIKPVIFQQMLNYIYTDKVENLDDAAFEFLYVAEKYQLENLRIMCINSFKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -