Lsyp023279.1
Basic Information
- Insect
- Leptopilina syphax
- Gene Symbol
- SUB1
- Assembly
- GCA_032872505.1
- Location
- CM065473.1:5900780-5901289[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.42 2e+04 -3.5 1.0 27 34 23 30 22 32 0.61 2 2 2.6e-25 1.2e-20 74.1 0.5 1 52 57 110 57 110 0.97
Sequence Information
- Coding Sequence
- atgccGAAATCTAAGGAATTCGTTGAAAGCGATGATAGTTCAGCGAGTGGAAGTTCCTCTGAGACTGAAAAGAAGGGAAAGAAGAGACCGAAGAAGGAAGTGAAGCAAAAGGAAACTACTAAAGTGGGATCTTCAAGTAAAAAACCAAAGACAAATGAAGATCAAACGTGGGAATTAGATGAAAAATGTCTAGTCACTGTTAGAGAATTTAAAGGAAAAACTTTAGTTGATATTCGTCACATGTATGAGGATAGAGAATCCGGAGAATTAAAACCAACGAAAAAAGGCATAtctctaaacaaaaaattatggcAAAAATTGGTCGATATAATTCAAGAAGTCGACGATGTAGTTAAGGAAAAATAA
- Protein Sequence
- MPKSKEFVESDDSSASGSSSETEKKGKKRPKKEVKQKETTKVGSSSKKPKTNEDQTWELDEKCLVTVREFKGKTLVDIRHMYEDRESGELKPTKKGISLNKKLWQKLVDIIQEVDDVVKEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00881256; iTF_00882038;
- 90% Identity
- iTF_00881256; iTF_00882038;
- 80% Identity
- iTF_00882038;