Basic Information

Insect: Leptopilina heterotoma
Gene Symbol: -
Assembly: GCA_015476425.1
Location: JABAIE010000018.1:286223-290182[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.079 17 7.7 0.7 1 21 76 97 76 98 0.94

2 18 0.3 64 5.9 1.8 1 23 106 129 106 129 0.92

3 18 0.0053 1.1 11.4 1.6 1 21 209 230 209 231 0.96

4 18 0.0014 0.29 13.2 0.1 3 22 290 310 288 310 0.94

5 18 1 2.2e+02 4.2 0.8 2 23 319 341 318 341 0.93

6 18 0.00068 0.14 14.2 0.2 3 21 393 411 392 412 0.94

7 18 0.88 1.9e+02 4.4 3.0 1 22 420 441 420 443 0.81

8 18 0.025 5.3 9.3 0.4 3 21 508 527 507 528 0.94

9 18 0.00042 0.089 14.8 2.9 1 23 545 568 545 568 0.98

10 18 0.0015 0.31 13.1 0.5 1 21 629 650 629 651 0.96

11 18 1.7 3.6e+02 3.5 0.9 1 23 659 682 659 682 0.78

12 18 0.0048 1 11.5 1.2 1 21 745 766 745 767 0.93

13 18 0.0063 1.3 11.1 6.7 1 23 775 798 775 798 0.97

14 18 0.0039 0.81 11.8 0.4 2 21 891 911 890 912 0.91

15 18 0.0031 0.65 12.1 0.6 2 23 921 942 920 943 0.95

16 18 0.00036 0.075 15.1 0.3 1 20 1037 1057 1037 1058 0.96

17 18 0.0024 0.5 12.5 0.4 1 21 1239 1260 1239 1261 0.96

18 18 0.0036 0.77 11.9 0.7 1 23 1268 1291 1268 1291 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.079	17	7.7	0.7	1	21	76	97	76	98	0.94
2	18	0.3	64	5.9	1.8	1	23	106	129	106	129	0.92
3	18	0.0053	1.1	11.4	1.6	1	21	209	230	209	231	0.96
4	18	0.0014	0.29	13.2	0.1	3	22	290	310	288	310	0.94
5	18	1	2.2e+02	4.2	0.8	2	23	319	341	318	341	0.93
6	18	0.00068	0.14	14.2	0.2	3	21	393	411	392	412	0.94
7	18	0.88	1.9e+02	4.4	3.0	1	22	420	441	420	443	0.81
8	18	0.025	5.3	9.3	0.4	3	21	508	527	507	528	0.94
9	18	0.00042	0.089	14.8	2.9	1	23	545	568	545	568	0.98
10	18	0.0015	0.31	13.1	0.5	1	21	629	650	629	651	0.96
11	18	1.7	3.6e+02	3.5	0.9	1	23	659	682	659	682	0.78
12	18	0.0048	1	11.5	1.2	1	21	745	766	745	767	0.93
13	18	0.0063	1.3	11.1	6.7	1	23	775	798	775	798	0.97
14	18	0.0039	0.81	11.8	0.4	2	21	891	911	890	912	0.91
15	18	0.0031	0.65	12.1	0.6	2	23	921	942	920	943	0.95
16	18	0.00036	0.075	15.1	0.3	1	20	1037	1057	1037	1058	0.96
17	18	0.0024	0.5	12.5	0.4	1	21	1239	1260	1239	1261	0.96
18	18	0.0036	0.77	11.9	0.7	1	23	1268	1291	1268	1291	0.97

Sequence Information

Coding Sequence: ATGTTTGTGGGTGAAGGAGCGCAGGCGGAAGTTGTTTGGGAGAGTATCAATATATCGGATGAGAATATGGAAGGAATTGTTAATAATTGTAATGAGGTTAAACAAACAGAGAGATCGGAGAGAAAAACCAGAAAATTTGAACCTCCCGCCAAGCAAGGTCAGGTCAAATACTTAACACGATCACGTTTTCGGATGTCAGAAAGATCGACCAAGAACAAAACAATTTTCGACTGTCCGAACAATTGTGGAAATTCCTTCTTTCAAAAACTCACATTAGATAGACACTTGAAATTCACTTGTGGTCAACCTTTACGATACCGATGTCCCTACTGCAACATGTCATCGAGAATTCGAAATTGCATTAACATTCATTTGAAAGCACGTCATCCAGGTTTGAGAAACTATGTGATTGATACAACCAGTAAACCGGAAACAGAATTCGAAGAGGATTATAATTCCCCTCATATTGTGCAGAAAGTCGAGCCCATTTGGAATGAAGAGCAGGAAATCAAAATTTTAAATGTTTCTAGTCTGGCAGCATTGGATATTAAGCATGAGTATGATAACTTGGAAGATGAGGATGATAATTTCTTCAATAAACATTTGGTGAGAGCGCATAAGCGCTATGTTTGTCCGAACAATTGTGGTAATTCGTACAAACACGAGCATACTTTGAAAGTTCATTTGAAATTCGGGTGCAATAGAAACGATCAACATAATTTTCATTTAGATGATGATGAATCAGATTCGGAATACGATGTCTCTACGAATGATGTTTTAAAGGTGAAGAGTACCAACGAGTTGCTGAATCCAATGGCGATTACCGAATTGAAAAATTATGAACAAAATTCCGAAGGTAGGTGGATTTGTCCAAACCAGTGTGGAGGAACTTTCAGTAGTCGAGGTAACCTGAACTATCATCTGAAAACCAACTGTGGTATAAAAGCAAAATTAGAGTGCCCCTACTGTCTACATCGATCAAAACAACCATCTAATGGTTTCGTTCACGTCAGAAATTCTCATCCCGGTGCTGAAATTTGCCTGGTCCATGTCGACACTGGCGAAGTCTTCAAGAGCAAGAAGGAAGCTGATCAAAATCCAAACCTTGATCTCATTAACGGTTCGCCTCAACTTTACGTAGATAGGAAAAAACCCTCGGGCAAAGCTGCAAATAACTGCCAAAACTGTGGAAAGGATTTCAAATCAGAACGCACTCTGGCTAGACACATTCTCGAAGGTTGCGGCTACCCACCTCGCTTCAAATGTCCTTACTGCGATTATCAAGTCAGAAGACTGTCCTACGCCTTCTTCCACGTGTCCAAGCATCATCCAGGCTGCGAGGTCTACATGGTCGATTTAGTCACCGGTGACAGTATTACCGACCCCGCTCAAATCAAGAAAGAAGCCATCGCCGACATTGCCGACGAACCGAAACCCTTGCCCATCGATCCAGTTTTAGTTCTACGCCCCCAGAGAATCGTCAAATCCCATCCCGCCGGTCTCCAAAAGAAAAGACTCCTATGTCCAATGGGCTGCGGTCGATTCTTCTTCTTCAGAGCAAGTCTCGAAAAACACAAGAAATACTACTGTTCCCAAAACAGAACATCCAAAATTGCAATATCGTCAAGTCGCTACAAATGTCCCTACTGCGAGAATCGCTACGAACACATCTCCAGTCTCTTCAGACACATCAAATCCACTCATCCCACGAAGAAGAAACACTTCATCGACACCCACGAGGAGGAAATCGTTCCCGAGAGCGCCAATTCCCCCATACCTCCCAAGAAGGAGCCACCACCAAAAGCAAAGAAACTGCCGAAACAGTCCGAAGACTTAGATGAGAAGACTGATGATAACCTAGAAACTAAGGAACCTCCCAAAGTATTCGTATGTCCCAATAAATGCGGCAGTAGTTTTGCAAACCTATGCAACGTTCAGCGACACATTCGTTTGAATTGCTCCAAAGCTCGTCGCTACAAATGTCCTCAGTGCAATTATCGATCTCAAAAATTCCTCCAAATAGCGAAACACGTAAAGGCTAATCATAAAACGAGTAAAATTTACGCCGTCGATTTCTTCACGAAAAAACAAATATTCGGGGAACAGAGACACAGACCAACTAGGCGCATCGTGCCACCCAAGACTGAAGAGACTCCAACCATCGAAGTAAAACCCGTTGTAAAACGAAGAGACCCACAACCAAAAGCCGACAACAAGACCGGTAAAAAACGTTTCCCCTGCACCAACAACTGTGGTCGCTCCTTCAGCACAAAACGTGCCGTCACTATGCACTTCCGTCACATCTGCGGAAAAGCCCCACGTTTCAAGTGTCCCTACTGTACCCAAATTTGTCGCCACCAAGGCAACATGACAATACACATTAAACATCGTCATCCCGGCAAGAAGAACTACATGATCGACATCAGTAAGAAAAAGAAATCGCCAACCGAAAACAAGAAAGAAGAAAAACAGGAGAGAGGAGAAATTAAAGAAGAAAAGGAAATTAAACAAGAAAAAGTAATCAAAGGAACAGTAGTTAAAGAAACAGTAATTAAAGAAGAGAAGGAAAGAAAAGAGAACGTCGATGACAAGACGAAAACCACGTCCATATTCGGGAATTCAACGAAGCGAAAGATTCCCAGACTATTTAATTATAAAAGACGAAGACTGATGTGTCCTAACAATTGTGGTCGTTTTTTCACTTCCCGCGTGAAATTGAAATTGCACACGAGCACCGTTTGCAAGAACCCAGTGAACACTAAATGTCCCTACTGCCCAAAAGTGGGCAAATACGCATGGAACATTGATAGGCACATAAAGCAGCATCATTCCGATGTAGATAGGAAACAAATTCTCCAAGAACAACAGGATTCAAAGAACGAAAAAATAGAGGACGAACAGGAAGAAGAGGTGGAGCTGAAACTAACCGACAATATCGAGGAGGATTCACCCCAGGATTTGGAGAATCTTCCAAAACCAGAGGAGGCAGACGATATTGAAATGAAAATGGTCAACGAACCCGAAAATGCAGAAGAAAAAGTCGATATACCGGACACACCATCAAGTACTAATTCGTCAAGTACAGCTTTGGATAGTCCATCCAAGAAATTTGTGTGTCCGAACAATTGCGGAAAATCGTACCCCAAGGAATCGAGTCTTAAGAATCATTTGTTCTTCACTTGTCAAAAACCCGCACGCTACGCTTGTCCGTACTGTCGAAGCTGTTCCAAAGTCACCTCCAATGGTTACGTGCACGTGAAGAGAATGCATCCCGATCGGAAGGTTTACCTCATCGACATCACTACTAACAAAGTTATCCGTTCAAGAAGAATGGCACCGGATCGAAGTCGCAGCTACGATATGGATAGAGAAGACGATAGGGAATACGAAAAGGAAGATGGTAGAGAATCCGAAAAGGAAGACGATAGAGAATACGAAAAGGAAGACGATAGAGAATACGAAAAGGAAGATGATAGAGAATACGAAAAGGAAGATGATAAGGAAGATGAAAGAGAAGACGATAGGGAAGACGATAAGGAAGATAAAGATGACGTCGATATGGAAGAAGAAATGGCCCTGTCGACAAACGTCGATATCGACGTTGATGAACCCGACGAGCCTGATGAACCGATTTTGGGTGCCGATGAGGAATTCACAAACGATCCGATCAGTTCCGAACGAGAATCATTAGAGATGAAGCAGAAGGAGGAGGTTTTTGTCTGTCCGAATAATTGTGGCAGTTCTTTTACTCATGAGAATAAATTGAATAATCATGTTCGTGATCAGTGTGGACCACCACGCTTTAAATGTCCTTATTGTTTTTACATTACAAGAGAGCCGTCTAATGTTTACGCTCACATTAAAAATAAACATCCCGATGAGAGGATCTACATGATTGACACTGACATGAATCAAAGCTGTAATGAGCCAGACTCACCTACAGGCAATGAAGACAATTAG
Protein Sequence: MFVGEGAQAEVVWESINISDENMEGIVNNCNEVKQTERSERKTRKFEPPAKQGQVKYLTRSRFRMSERSTKNKTIFDCPNNCGNSFFQKLTLDRHLKFTCGQPLRYRCPYCNMSSRIRNCINIHLKARHPGLRNYVIDTTSKPETEFEEDYNSPHIVQKVEPIWNEEQEIKILNVSSLAALDIKHEYDNLEDEDDNFFNKHLVRAHKRYVCPNNCGNSYKHEHTLKVHLKFGCNRNDQHNFHLDDDESDSEYDVSTNDVLKVKSTNELLNPMAITELKNYEQNSEGRWICPNQCGGTFSSRGNLNYHLKTNCGIKAKLECPYCLHRSKQPSNGFVHVRNSHPGAEICLVHVDTGEVFKSKKEADQNPNLDLINGSPQLYVDRKKPSGKAANNCQNCGKDFKSERTLARHILEGCGYPPRFKCPYCDYQVRRLSYAFFHVSKHHPGCEVYMVDLVTGDSITDPAQIKKEAIADIADEPKPLPIDPVLVLRPQRIVKSHPAGLQKKRLLCPMGCGRFFFFRASLEKHKKYYCSQNRTSKIAISSSRYKCPYCENRYEHISSLFRHIKSTHPTKKKHFIDTHEEEIVPESANSPIPPKKEPPPKAKKLPKQSEDLDEKTDDNLETKEPPKVFVCPNKCGSSFANLCNVQRHIRLNCSKARRYKCPQCNYRSQKFLQIAKHVKANHKTSKIYAVDFFTKKQIFGEQRHRPTRRIVPPKTEETPTIEVKPVVKRRDPQPKADNKTGKKRFPCTNNCGRSFSTKRAVTMHFRHICGKAPRFKCPYCTQICRHQGNMTIHIKHRHPGKKNYMIDISKKKKSPTENKKEEKQERGEIKEEKEIKQEKVIKGTVVKETVIKEEKERKENVDDKTKTTSIFGNSTKRKIPRLFNYKRRRLMCPNNCGRFFTSRVKLKLHTSTVCKNPVNTKCPYCPKVGKYAWNIDRHIKQHHSDVDRKQILQEQQDSKNEKIEDEQEEEVELKLTDNIEEDSPQDLENLPKPEEADDIEMKMVNEPENAEEKVDIPDTPSSTNSSSTALDSPSKKFVCPNNCGKSYPKESSLKNHLFFTCQKPARYACPYCRSCSKVTSNGYVHVKRMHPDRKVYLIDITTNKVIRSRRMAPDRSRSYDMDREDDREYEKEDGRESEKEDDREYEKEDDREYEKEDDREYEKEDDKEDEREDDREDDKEDKDDVDMEEEMALSTNVDIDVDEPDEPDEPILGADEEFTNDPISSERESLEMKQKEEVFVCPNNCGSSFTHENKLNNHVRDQCGPPRFKCPYCFYITREPSNVYAHIKNKHPDERIYMIDTDMNQSCNEPDSPTGNEDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00881509;
90% Identity: iTF_00883281;
80% Identity: -