Basic Information

Insect: Leptopilina heterotoma
Gene Symbol: -
Assembly: GCA_015476425.1
Location: JABAIE010000215.1:41282-46895[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.11 24 7.2 0.0 1 23 333 355 333 355 0.88

2 12 0.06 13 8.1 0.4 2 22 358 378 357 378 0.91

3 12 3.2e-06 0.00068 21.5 1.9 3 23 425 445 424 445 0.98

4 12 5.8e-05 0.012 17.5 0.4 1 23 451 473 451 473 0.98

5 12 0.00046 0.098 14.7 2.4 1 23 479 501 479 501 0.98

6 12 2.1e-05 0.0044 19.0 1.0 1 23 507 529 507 529 0.98

7 12 0.00058 0.12 14.4 1.3 1 23 535 557 535 557 0.98

8 12 6e-07 0.00013 23.8 0.5 1 23 565 587 565 587 0.98

9 12 0.0055 1.2 11.3 0.2 1 23 593 615 593 615 0.94

10 12 1.2e-05 0.0026 19.7 1.7 1 23 621 643 621 643 0.98

11 12 2.4e-05 0.0051 18.8 0.6 1 23 649 671 649 671 0.98

12 12 0.0017 0.35 13.0 2.4 1 23 677 700 677 700 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.11	24	7.2	0.0	1	23	333	355	333	355	0.88
2	12	0.06	13	8.1	0.4	2	22	358	378	357	378	0.91
3	12	3.2e-06	0.00068	21.5	1.9	3	23	425	445	424	445	0.98
4	12	5.8e-05	0.012	17.5	0.4	1	23	451	473	451	473	0.98
5	12	0.00046	0.098	14.7	2.4	1	23	479	501	479	501	0.98
6	12	2.1e-05	0.0044	19.0	1.0	1	23	507	529	507	529	0.98
7	12	0.00058	0.12	14.4	1.3	1	23	535	557	535	557	0.98
8	12	6e-07	0.00013	23.8	0.5	1	23	565	587	565	587	0.98
9	12	0.0055	1.2	11.3	0.2	1	23	593	615	593	615	0.94
10	12	1.2e-05	0.0026	19.7	1.7	1	23	621	643	621	643	0.98
11	12	2.4e-05	0.0051	18.8	0.6	1	23	649	671	649	671	0.98
12	12	0.0017	0.35	13.0	2.4	1	23	677	700	677	700	0.94

Sequence Information

Coding Sequence: ATGTCCACCGTCATTGAAGAGTTCAACTACCTGTGTCGTCTGTGTGCGACGAAACTCCTCATGGGTTTGCCGATTTTCGATACCGATAAGCAGATGAGGAATATCGACAAAAAAATTACAACCTGCTTATCCCTACAGGTATCGATGAGTGATCAACTGCCAAAAGTTATCTGCGGCGAATGTGCATTTAAATTGGAGGAGTTATTTGATTTTCGTGAAAAGTGTCTCAACACTGAGGAAATGTTCACGGGAATGTTGAAGGAAATCACAAAACAAGAAGACGCAAATATGGAGCATCATCTAAATATTGAAATTCAATCAAACATTGAAGAAATACAAACTCATGGAACAACAAATCAGCTGAATGATGAAATTCACACAATGCAAATAATGGACGATATGGATTTAGCCGGTGGTGAACAGGTTGTCACACAAGAAGAAATAAATCATCAAGATGATGATCTCGAAGTCACTGATATTGATTGTCTCGATGGTGAAACAGTTCGAATGGTCGATGAACATATTCGAGAAGTTTCAAATCATCAGATCGCGATGCATTTGGAAGGAGATATGACAGTGGTTGGGAATTTAACTGTTCAGGGACATTTAGATCCACTTGAAATTAATTATGTCACGACGATTAATCCCAACTCCAGTGGCGAACAAATAGTTCACTATTGCGAAAGCGTTAAATATGAACCACTTACCGTAAAAGATGAATTTCGTAGGCTACAAGAGAGCCTTAATGTCGAGTCAACGACTCGTGTTATTGAAAATAACGTGAGTACAGAAGATTTTTCCACAACGCACAAAACAAAGGAAACATTTAACATTCCGAGTGAATCGTTAAATACAACGACAGTAACGGAACTTCCCTCAACAAGTCAAGTGAACACTGAAAATTGTCTAGTTGTTGAGTATTCAAAACAGGGGAAAAAGGATTTATTTGATTCAATTCTTGAGAATCCGACAATAGACGCAAACGGAGTGAATTGGTACGTTTGTCCATTTTGCAATGAAGCTGCCTCGGATCCAAATAATTTAATTCCCCATTTTGAGCAGCATTTTTGTAATTGTCCCACTTGTGGTCTTTATTTCACGAGTGTTGAAGTATTGACGATTCATAAGCAAACATGTGAGGAGAAAATTAATTCAATAGACGAGCAGATTGTTGTGGAGGAGAAAATTGATGAGACGGAAAAAATAACGGAAACACAGGACGACGAACAGCAGAAGAAGCAATCAGTTCGTCGGAAGTGGACGCCGAAAATTTGTACCCAATGTGGAAAGCAGTACAGAACAAATTATAAATTGCAGGAGCATATGCGTAAGCATACGGGGGAAAAACCATTTCAATGTTCAATGTGCGAGAAAGCTTTCAGAAGTAAAATTGGATTGGCACAGCATTTTGCGACACACACTGGACAATTTGATTATAATTGTTCGACCTGTGGGAAGGGTTTTCAGTGCAAGAGTTATCTTATTGTACACCAAAGGGTACACTCCGACCTGAAGCCATATCCCTGCGATATTTGCAGTCAAAATTTCAAAACGAAACAATCACTTCTCGATCATCAAAATCGTCATCTAGGCGTAAAACCCTACATGTGCGAAGTCTGCGGACGAGGTTTCATCACCAAGGGCCTATGCAAGAGTCATCAGAAAATTCACTCCGGCACGGATAATCGTCAATATCCCTGTGTTGTCTGCAATAAAATGTTCGTCAGCAAAAGCTATTTGAACACTCATCTTCGAATTCACACCGGCGAGAAACCCTATTTGTGTGAAGTTTGCGGAAAGGGTTTTCTAACGCGTGTCGATTTGAAAATTCACTCCACCATGCATACAGGTGAGAAGAGTTTTAAATGTGAAGTTTGCGGAAAAGTATTCGCGAGACGTGCCGCCCTACGATGCCATCGAAGATCACACACCGGTGAACGACCATACAGATGTGATGTTTGCGGTAAAACTTTTACACAATTTAGTCCAATGGCAATTCATAAACGTTTACATACCGGTGAAAGACCCTATGAATGTGATGTTTGTGGCAAAGCATTTGTGTCAAGATCAACGATGATGTGTCACAAAAAAAAGAATCACGCCGACGCTCCTCAATCAAAAGATGGTGCGCCCGTCGATAAAAAATGGAAGGCCGGCACTAATTCTCAATCAAAAGCAAATGTAACGCACATACTGGGAGAATAA
Protein Sequence: MSTVIEEFNYLCRLCATKLLMGLPIFDTDKQMRNIDKKITTCLSLQVSMSDQLPKVICGECAFKLEELFDFREKCLNTEEMFTGMLKEITKQEDANMEHHLNIEIQSNIEEIQTHGTTNQLNDEIHTMQIMDDMDLAGGEQVVTQEEINHQDDDLEVTDIDCLDGETVRMVDEHIREVSNHQIAMHLEGDMTVVGNLTVQGHLDPLEINYVTTINPNSSGEQIVHYCESVKYEPLTVKDEFRRLQESLNVESTTRVIENNVSTEDFSTTHKTKETFNIPSESLNTTTVTELPSTSQVNTENCLVVEYSKQGKKDLFDSILENPTIDANGVNWYVCPFCNEAASDPNNLIPHFEQHFCNCPTCGLYFTSVEVLTIHKQTCEEKINSIDEQIVVEEKIDETEKITETQDDEQQKKQSVRRKWTPKICTQCGKQYRTNYKLQEHMRKHTGEKPFQCSMCEKAFRSKIGLAQHFATHTGQFDYNCSTCGKGFQCKSYLIVHQRVHSDLKPYPCDICSQNFKTKQSLLDHQNRHLGVKPYMCEVCGRGFITKGLCKSHQKIHSGTDNRQYPCVVCNKMFVSKSYLNTHLRIHTGEKPYLCEVCGKGFLTRVDLKIHSTMHTGEKSFKCEVCGKVFARRAALRCHRRSHTGERPYRCDVCGKTFTQFSPMAIHKRLHTGERPYECDVCGKAFVSRSTMMCHKKKNHADAPQSKDGAPVDKKWKAGTNSQSKANVTHILGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00883246;
90% Identity: iTF_00881473;
80% Identity: -