Basic Information

Insect: Leptopilina drosophilae
Gene Symbol: RREB1
Assembly: GCA_032873175.1
Location: CM065479.1:3372313-3396999[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.7e-05 0.0034 19.0 0.3 1 23 206 228 206 228 0.98

2 14 0.00093 0.19 13.6 0.3 1 23 234 257 234 257 0.96

3 14 0.0025 0.52 12.2 0.9 1 23 335 358 335 359 0.93

4 14 3.7 7.6e+02 2.2 0.5 1 19 442 460 442 462 0.90

5 14 0.0047 0.96 11.3 0.1 1 23 576 598 576 598 0.96

6 14 8.2e-06 0.0017 20.0 1.6 1 23 607 629 607 629 0.98

7 14 0.0076 1.6 10.7 2.6 1 23 635 658 635 658 0.97

8 14 0.00058 0.12 14.2 1.9 1 23 1044 1067 1044 1067 0.97

9 14 0.0017 0.34 12.8 0.8 3 23 1308 1328 1306 1328 0.97

10 14 0.47 96 5.0 4.8 1 23 1334 1357 1334 1357 0.97

11 14 0.0073 1.5 10.7 1.5 1 23 1399 1423 1399 1423 0.97

12 14 4.1 8.4e+02 2.1 3.4 1 23 1507 1531 1507 1532 0.95

13 14 0.083 17 7.4 0.2 2 23 1578 1599 1577 1599 0.94

14 14 0.0037 0.74 11.7 4.1 3 23 1607 1627 1605 1627 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.7e-05	0.0034	19.0	0.3	1	23	206	228	206	228	0.98
2	14	0.00093	0.19	13.6	0.3	1	23	234	257	234	257	0.96
3	14	0.0025	0.52	12.2	0.9	1	23	335	358	335	359	0.93
4	14	3.7	7.6e+02	2.2	0.5	1	19	442	460	442	462	0.90
5	14	0.0047	0.96	11.3	0.1	1	23	576	598	576	598	0.96
6	14	8.2e-06	0.0017	20.0	1.6	1	23	607	629	607	629	0.98
7	14	0.0076	1.6	10.7	2.6	1	23	635	658	635	658	0.97
8	14	0.00058	0.12	14.2	1.9	1	23	1044	1067	1044	1067	0.97
9	14	0.0017	0.34	12.8	0.8	3	23	1308	1328	1306	1328	0.97
10	14	0.47	96	5.0	4.8	1	23	1334	1357	1334	1357	0.97
11	14	0.0073	1.5	10.7	1.5	1	23	1399	1423	1399	1423	0.97
12	14	4.1	8.4e+02	2.1	3.4	1	23	1507	1531	1507	1532	0.95
13	14	0.083	17	7.4	0.2	2	23	1578	1599	1577	1599	0.94
14	14	0.0037	0.74	11.7	4.1	3	23	1607	1627	1605	1627	0.98

Sequence Information

Coding Sequence: ATGATGCGGGTGGGGGAGGCAGACAGCAAAGCGCCAGATAGGGGAAGGTGCACCAGGTTTCCTCCGTGGAGCTCTACAAACTATATTATGAACAGCAGGCGGCAGGAGCAGCCGGACAAAAGACTGGTGAAGAGTGTGTGTAATCGGCGTTTGGATTTTAATCAAGTACACGAGCACATAGGCTTCATGGACGATACGGTCAATAGGACAGAGACAGCATCTGCGAAAGCCTCTTGGTCGGAGGGTTGGAGGTTACGGGTGGGTAAGTCCAAGGTTGTCAGGGTTACAGCTCTCGAAACATATACTAAAACCGACGAACCGCCATCTTTGCTTCTCTCCTGCGGCGTGTGGGTGTTCCGGTCGGCGAGGGAGGAGGGGAAAATAGTCCTTAAATCTAGTGAGAGCGAGGGAGACGGACGGCAACTGAAACCAAAAATTGGACAGTACCAAACAAATTGCAGTGTTGGACAAACCACAATTGTACCAGAATTATTGATTGGTCAATCGAGGAAGGCGACTTCATCAATTCTTTCAAATTATCAGGATTTATCGAATCATCATCATATTGAAAATCACAATTCTCCGGAAAGTATTGACAGTGCCATTGAGGAAGAATTCACTTGTAAAGTATGTTACAAAGTATTGAGATCCGCGAGTTCCTTGGAGAGACACATTCTCGTGCATGCTGATGAGCTATCCTTCAAATGTAATCCTTGCGACATGGCTTTCACCAGCAACGGAAACATGAACAGACACTCGAAAATTGCTCACAATCGCCTCTCGTCGCACAGTTGTTCCGACTCCGAGGCCAGCAATGACTCGGAATCGCCGTCAAAGAAAATCGAGGAATACAACAACAACGAAATTGCCAAAAGAAATTCCCCGGATCTCATCAATGAGAATGAATCTCTGAATTTGTTGAAGAGAAAGTCCCTGGACTACAGTGAGGATTTGTCGCCgcagaaaaaattcaagaacaACCTAACGGAGAGTCAGATCAACTACACATGTCCCATTTGTGGAAAGCAAGATTTCGCCAGCAGTTCGCTTTTGGAAATACATCTCGAGCATCATCACTTGGAGATCGACAAGTGTGATACGGACAATTTGTCCTACAAATGTCACAGGGTTCTCAATCTCCATCGATCGGTCAACAACCTCAACGAGAATTCCTACAGGAATGCCTCCAGAAACCTCAGACATTCAGTCGAGGGTTTTGGTGACTTGACCTTTGTCGATTTCACCTCAACCAAATATCCCATGATCGCCCGAGCGAAATGCGAAGAATTCTTGCACAGACCAGCATCGGGGGAAATGGCCAAGTTCCAGTGTGCAAAGTGCCTGAGAGCTTTTCCCTGCAAGTCGGCTTTGGACTCCCACGAGATGGATTGTGGAATTCCAAACGTTCACTGGAAGGGAAACGACTCCCAGTCGAGGAGGGACGACTTCTTCGCGGGACTCAATCTTCAAAACAAAGCTGCCATGACAGAAGCGAAAGACGGAAAGGACCTCGCCGACATTCAGAGCATCATCAGCATCACCTCGAGTCCGATTCTTCACAGCTTCTCCAGATCCGACGCCAGCACTCCGGACAATTGTAGCAACAAAATCAATCAAAACGTCGGATCGTCCGGTTCCTCGGGAACCGTTTCTTCCGAATGTAATGAGGAGGAAACTCAGGACGCCTTCGCCGCCGAATTcagaaaaatgaaactaaaaggCGAGTTCCCCTGCAAACTCTGCGACGCAGTGTTCCCAAATCTCAGAGCCCTCAAGGGCCACAACAGAGCTCACATGGGAGTTCCTCCCGGAATGCCCTATCCCTGCAACATCTGCAACTACACCAGCACCGACAAAACCACTCTCACGAGGCATCTGAAGACGCACAACGGCGACAGGCCCTTCGAGTGTGCCCAGTGCACCTACGCCTTCACCACCAAGGCCAACTGCGAGAGACACGTGAGAAATCGCCACGGCATCCACGACAAGAACGAAGTGCAGAAGACAATCATTTACCACCCGACTGAAGATCTGACGAACGAGAGTCTCGACAGGAGCCTCCCCAGAACAGTCAAGGACGAGGTGAGGAAAACCCTCGTCTTTCCCAAAGAAGAAAACTACCACAACTCCTACACCGTCATGCACATGCATCAGGACATGAAGGTCAAGGACGAGAAGAAACCCGAGCCGAGCATTAATCCCGCGTCGCAACTAAATCCCCTGAACCACTTGAACCACATCAGCCAACTGAACCAGATGAACCACATGACCATCCAGGCGAACCACTACGAACAGTCGGAAGTGTTCCCCAGACCGCGGTCTGTCCAGCCTCTCGAGTTGACCTACAGAAGTTCCCCGCAGCATCCAATCGTCAAGTCCGAAACCCCCAGGATGGAGGAAGACCTCGAGTCGAGGTCGTCGGAGGGCAGCGTATCTCTAGTCAGTGAAACCAAACCGGACACACACCAAAGAATTCAAGCCAATCCGATGAACCTGAAAAAATCGAGTGATTCCTCCAGCGACGACGGACCCCTGGACCTCTCCATGGACGTACTCGACCTCAGCAAAAAATCCAAAGACAAAGAAGTGAACGGCAAATCCGAGGACCACGTCGAGGACCAGAAAGACTTCTACAACTCCGCCAATCCTCTCCTCCTCACGCAAGCCCTCCTCAAGGCGCGCCAAGTCAACTCACCCCCCACGTCTCTAGAAGCCCTCTACGCCAACGCCCACGCCAACATGATCTACAACAACCTGGCCCTCAGCTCCGGCACCGGTCTCATCTCCCCCTACTTTCTCAACTCCATCTTCGAGCAAGGCTACGCCATGAAGGAGCGCCTCCAAAAGGAACTAGCCCGAGGTCTCCAAACCAGCGGCGGCTCCCTCGTCGAGCAGCCAACCGAAAGCGTCGCCTTCAACAACAACTATCCCCCCACAGGACGAACACCCCAACCACGAGAGGAGCAAATCCCCTATCCCAGTCTAATCCCCCCGAACGTCTCCAGCAGAGTAGTCTCCCCCAGGGAGCGCATCAGCGAATCCCCCTCGTCCAATTCGGTGAAAATGGTCATCAAGAACGGCGTTCTCATGCGCAAGCAAAAGCAGAGACGCTACCGAACCGAGAGGCCCTTCACCTGCGAATACTGCTCCGCCAAGTTCACCCTCAAGACCAACATGGAGCGACACATCAAGCAGCAGCACAACGAACTCTGGCACCGAAGACCCCGGGGCGGACACTCCACTCGAGGTCGACCCCCCGCCAGACCCCCAACTCTCCTCCAAAACGTCGGCGCCAACTCCCCCAGCTTCATTCGCAGCAAATACGAACCCCCGGTGCAAAAGGAAGAAGACTTCGCCCGTCACCCGATCTCCGATCAAGTCAAGTACGCGATCCTCGCGCAGCAACTCAAGGGCAACAAGGGCGACGAGCCCCAAGACTCCGACGAGGAGCTGGTCATCGACGAGGAAGCCTGCGAGCACACCAAGTCAATCAGTCTGCTCCGCAAAAACCTCGAGCACGAAAAACAAGAGGACCTGGACGAGGAGAGAAAAGACGACCCCCCAGAGGCGAAAATCGACAATGGGGACAAGGAGGAAAAGGAACAGGaggtagaagaagaagaagtagtcGAAGCAGAAAAAAAGGAGCCCGAGGAGAGCGAGAGGAAAACGGAGGAAGAAGCCGTCGACCTGGCCAGTGTACCAAAGCTAATCCAAACCGCGTCGCAAAAGTACCCACAGTTCAAGTCCCAGTACCTCAGCGACGAGGACGGTGTCGCGCACTCCAACAGCGAACACTCTGGCAATCACTCCGCGAGTACGGACGAGAAGTCCGAAAACTCCCTCACCTCcctgaagaagaagaaaaagaagaagaagatgaaagCCTCGGCCTACTCCATGGCGCCCAATCGAGTCATCTGCAAGTACTGCCACCGCGAGTTCCCCTGGATCTCCTCCCTCCGTCGCCACATTCTCACTCACACCGGAGTGAAGCCCTACCGCTGCGACTACTGCATGCTCGACTTCACCACAAAGTCCAACTGCGATCGCCACCTCAATCGCAAGCACAAGAGCCTCCTCCAACGCTCCAACGCGCGCAACATTCGCAACTCCTCATCGCCCGACAATCACGACTCCCGTGCCACCACCAACAACAACAGCTTCTCCACGAGGAACGTCCCCGAGCGACCCTACAAATGCAACCAGTGTCCCAGCTCGACATTCGCCACCCTCGGCAATCTCAAGAAGCACCGCTCCACCAAGCACTCGAGGAAAATGAATTCCCGATCTGAAACGTCTTCCAGCGATCCTCAACACTCGGATCATTGTCAGAAGCAGAACGATCAGAGCGGCGACGACGGCGGATCGTCGAGTTCGGAGAATGTCGATGCATCCTCGCCGCTGCTGGAACATCAGAAGCCCCATCAGAATACTTCCTCGACGACCAATGAGGCGGTGATGAGGTCTTGTCGAACGTCGCCCACGTCCTCGTCGCCCGGTCCCACGGACACGCCATTCAAGTGTCATATTCCGAACTGTGACAACGGATTCGCCGAGAGGCAGGACTGCTTGGATCACATTCGAATGCACCACGAGCGGGAGTATGAGATTCTCGTCTCAAAAGGAGCTCTGCAGATGGGAATCACCTCCGCTGAGGAGCAACAACCCCCGGCCAATCAACACTCGAGCGATGGTCCCAGGAGTCTCGACTATAAAGACCGAAAGgTTGTCTGCGCCTTTTGCATGCGACGATTCTGGTCGGCCGAGGACCTCCGACGCCACGTGCGAACTCACACCGGCGAGAAACCATTCTGGTGCGACATTTGCGACAGGCGATTCACTCTCAAGCACAGTATGCTTCGCCATCGAAAGAAGCACGAGTCAGTCGACTCGACAATGTACATTGGCAGTGGCGATGAGGAAATTTCTCCCAATCAACCGCCAACAATCACACCGAGAAGCCAACAGCAATCGCCAGCTTCGACTGGCAATTCAATGATTGCCGAGAGAATGTCCCTGCCGACTGTGGCCACCATTGCCACCGGCGACGCTGCTCCCAGTAGCCTCACCAGGTTCAATCCCTACGAGAAACTTGCGACGCTCACCAGTAAATTGTCAAACGCCCAGAGCAATAATCACGACGCAACGGAAACTGGCAACGATCTGATCTCCAATTTACTGGGCATCAAGGATCCCGGCATTGTCGATAAAATGCTCCTCGCCACTCCTGACGACGCTGCAAAACTATTGGGAGTCAAGGGCAATAGTGAGTAA
Protein Sequence: MMRVGEADSKAPDRGRCTRFPPWSSTNYIMNSRRQEQPDKRLVKSVCNRRLDFNQVHEHIGFMDDTVNRTETASAKASWSEGWRLRVGKSKVVRVTALETYTKTDEPPSLLLSCGVWVFRSAREEGKIVLKSSESEGDGRQLKPKIGQYQTNCSVGQTTIVPELLIGQSRKATSSILSNYQDLSNHHHIENHNSPESIDSAIEEEFTCKVCYKVLRSASSLERHILVHADELSFKCNPCDMAFTSNGNMNRHSKIAHNRLSSHSCSDSEASNDSESPSKKIEEYNNNEIAKRNSPDLINENESLNLLKRKSLDYSEDLSPQKKFKNNLTESQINYTCPICGKQDFASSSLLEIHLEHHHLEIDKCDTDNLSYKCHRVLNLHRSVNNLNENSYRNASRNLRHSVEGFGDLTFVDFTSTKYPMIARAKCEEFLHRPASGEMAKFQCAKCLRAFPCKSALDSHEMDCGIPNVHWKGNDSQSRRDDFFAGLNLQNKAAMTEAKDGKDLADIQSIISITSSPILHSFSRSDASTPDNCSNKINQNVGSSGSSGTVSSECNEEETQDAFAAEFRKMKLKGEFPCKLCDAVFPNLRALKGHNRAHMGVPPGMPYPCNICNYTSTDKTTLTRHLKTHNGDRPFECAQCTYAFTTKANCERHVRNRHGIHDKNEVQKTIIYHPTEDLTNESLDRSLPRTVKDEVRKTLVFPKEENYHNSYTVMHMHQDMKVKDEKKPEPSINPASQLNPLNHLNHISQLNQMNHMTIQANHYEQSEVFPRPRSVQPLELTYRSSPQHPIVKSETPRMEEDLESRSSEGSVSLVSETKPDTHQRIQANPMNLKKSSDSSSDDGPLDLSMDVLDLSKKSKDKEVNGKSEDHVEDQKDFYNSANPLLLTQALLKARQVNSPPTSLEALYANAHANMIYNNLALSSGTGLISPYFLNSIFEQGYAMKERLQKELARGLQTSGGSLVEQPTESVAFNNNYPPTGRTPQPREEQIPYPSLIPPNVSSRVVSPRERISESPSSNSVKMVIKNGVLMRKQKQRRYRTERPFTCEYCSAKFTLKTNMERHIKQQHNELWHRRPRGGHSTRGRPPARPPTLLQNVGANSPSFIRSKYEPPVQKEEDFARHPISDQVKYAILAQQLKGNKGDEPQDSDEELVIDEEACEHTKSISLLRKNLEHEKQEDLDEERKDDPPEAKIDNGDKEEKEQEVEEEEVVEAEKKEPEESERKTEEEAVDLASVPKLIQTASQKYPQFKSQYLSDEDGVAHSNSEHSGNHSASTDEKSENSLTSLKKKKKKKKMKASAYSMAPNRVICKYCHREFPWISSLRRHILTHTGVKPYRCDYCMLDFTTKSNCDRHLNRKHKSLLQRSNARNIRNSSSPDNHDSRATTNNNSFSTRNVPERPYKCNQCPSSTFATLGNLKKHRSTKHSRKMNSRSETSSSDPQHSDHCQKQNDQSGDDGGSSSSENVDASSPLLEHQKPHQNTSSTTNEAVMRSCRTSPTSSSPGPTDTPFKCHIPNCDNGFAERQDCLDHIRMHHEREYEILVSKGALQMGITSAEEQQPPANQHSSDGPRSLDYKDRKVVCAFCMRRFWSAEDLRRHVRTHTGEKPFWCDICDRRFTLKHSMLRHRKKHESVDSTMYIGSGDEEISPNQPPTITPRSQQQSPASTGNSMIAERMSLPTVATIATGDAAPSSLTRFNPYEKLATLTSKLSNAQSNNHDATETGNDLISNLLGIKDPGIVDKMLLATPDDAAKLLGVKGNSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00880008;
90% Identity: iTF_00882444;
80% Identity: -