Basic Information

Insect: Leptopilina drosophilae
Gene Symbol: -
Assembly: GCA_032873175.1
Location: CM065486.1:2261452-2281231[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.8e-05 0.0056 18.4 0.7 1 23 148 170 148 170 0.95

2 15 0.001 0.21 13.4 1.1 3 23 178 198 177 198 0.99

3 15 0.00021 0.044 15.6 0.0 1 23 345 367 345 367 0.98

4 15 0.025 5 9.1 0.1 2 23 374 396 373 396 0.95

5 15 0.00013 0.027 16.2 2.7 1 23 424 446 424 446 0.97

6 15 2.4 4.8e+02 2.8 0.0 1 23 461 483 461 483 0.86

7 15 0.51 1e+02 4.9 0.4 2 23 490 512 490 512 0.95

8 15 0.0016 0.33 12.8 2.2 2 19 520 537 520 541 0.94

9 15 0.00041 0.082 14.7 7.1 2 23 548 569 547 569 0.95

10 15 0.0069 1.4 10.8 0.3 3 23 576 596 575 596 0.97

11 15 8.9e-06 0.0018 19.9 0.4 1 23 605 627 605 627 0.98

12 15 0.00038 0.077 14.8 0.3 1 23 633 655 633 655 0.98

13 15 0.0011 0.22 13.4 0.3 3 23 663 683 661 684 0.95

14 15 0.0019 0.39 12.6 0.0 1 23 698 720 698 720 0.95

15 15 0.038 7.8 8.5 0.1 1 20 1185 1204 1185 1207 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.8e-05	0.0056	18.4	0.7	1	23	148	170	148	170	0.95
2	15	0.001	0.21	13.4	1.1	3	23	178	198	177	198	0.99
3	15	0.00021	0.044	15.6	0.0	1	23	345	367	345	367	0.98
4	15	0.025	5	9.1	0.1	2	23	374	396	373	396	0.95
5	15	0.00013	0.027	16.2	2.7	1	23	424	446	424	446	0.97
6	15	2.4	4.8e+02	2.8	0.0	1	23	461	483	461	483	0.86
7	15	0.51	1e+02	4.9	0.4	2	23	490	512	490	512	0.95
8	15	0.0016	0.33	12.8	2.2	2	19	520	537	520	541	0.94
9	15	0.00041	0.082	14.7	7.1	2	23	548	569	547	569	0.95
10	15	0.0069	1.4	10.8	0.3	3	23	576	596	575	596	0.97
11	15	8.9e-06	0.0018	19.9	0.4	1	23	605	627	605	627	0.98
12	15	0.00038	0.077	14.8	0.3	1	23	633	655	633	655	0.98
13	15	0.0011	0.22	13.4	0.3	3	23	663	683	661	684	0.95
14	15	0.0019	0.39	12.6	0.0	1	23	698	720	698	720	0.95
15	15	0.038	7.8	8.5	0.1	1	20	1185	1204	1185	1207	0.93

Sequence Information

Coding Sequence: ATGGACGTGCCGGAGGAATTGACTCTACATTGGGCTGAGGATGTGGGCAATGTCATTCACGAGGAGGTGTGCGGCCTCGAAACGGAAATGGTCGCGCAAGAAGAGGAAGTGATTGGCGCCTGCGAGGAAGTTATCGAGGAGGCCGTCGAGGAGGAAGTTATCGAACAACAACCGGAACAAGAGTCGAACGACACTGAGATTTTAATGGTGCCGCAGTCGAGTGACATGGAGTCAATTTATATTGTCCCACAGGACCAGGGCCATGATTATTTCAACATTCAAGTCACCGAGGAAGTTGTCGCCGATAGTTGGGATCGATCCGGACCCGACGATGGtgTCGAGATTCCGGAGACGAAAGTGTCGCACGACAATTTATTGGAATACGACGACATGGAAATTCCATTGCCAATTGATCAAGATTCTTACACAAATACACGGCCCTATCCGTGCGATTTTTGCAGTCGTCGCTTTCGAAAGAAGGCGAATCTAATGAATCACATGGTGGCGCATCAAACCGATCGTCCGCATGGCTGCAATCTTTGTGGCGCGCGTTACGTGCGCAAATGCGATTTAATGAATCATTTGAAAATTCATGCCTACGCACCGTCGCGCGACGGTCTCGACGACGATCTCAATGACGAGGATCCCCTGATGAACGACGAGGAGGAAATGACAAAAgGTCGACGAAAGAAGGTGCAATCGAATACTCCACGTAGACGAAAAAACAATACAGCCGCAGCTGGCGGTAAACGTTCACTAGTCGTCGCTCCCGGTCAAacagcagcaacaacaacatCCTCGTCGTCATCAAATCTCGCCGACGATGGCAAAGAAGTCGTTGGCAAACTAATGAATAAATCAACCTACAACTATGTTGCCGAGGACATTCGTTTAATGGAGGTTGCGTCGCGCAGCACGACAAATAATCGCAGCGCTGGCGGCAATAGTTTAGCGTCGAGTTCACGCTGGACCGATCAAATGACAGTGATCAATGATCCACCGCGTTGGCCAATCACCGATCCAACGAAGCCCTACGTCTGTCAAAATTGTGGCGTCGCATTCGCACGCGAGAAGGCGCTCGCCTCACATTCGCGAATTCACGGCGGCGACTCTCCACTCGAGTGTTCAAATTGCGGCGAAATGTACTGGGACTTGAACGCACTGCGCGAGCATATGAAAAATAAACACGGCAGCACCATTGAAATTGCCAACGATCAAATTGATGGCAACGAGGCGGGTAATTACACTGGCGACGATCGCTTTGGGGAATTCTTCTGCGACACCTGCGGCGTTCCTTTTCATCGATTGGATCTTCTTAAGCGCCACCGGAAaaCTCACGTGAAACAGGAAATGGACTTGAATGAGGGACCGAGTCAACAGCACGTGTGCACTGTTTGTGGCGAGTGGTTCGAGGAGGCGTTGGCGCTGTTGGCGCACGCCGAACTTCATGCACGCTCGCACAATCGTCGTTGTTTGTTGTGCGGTGAACGTTGTCGCGACGATGCCGATGTCGCCGAACACGTTCGGCAAAATCACGCCGACGATGCGCCACCAAATACCTGCAATCTCTGCGGGAAGACGTGCAAGGACAAGAGGAGTCTCTTGAAGCACGCTTGGATTCATAATTcggacaaaaattgcaattgcacCAAGTGCGGTAAACGCTTTCATAGCAAGGCCCGATTGCGACGaCACATGCTGTCGCATCGCAATAAAAATGTGGCGTGCGACGAGTGCGGCGAGGAATTCGCCGATGGCCGAACGCTGATGAGCCATCGACATTCGCATAATAAGGAACTCGGCGGACGATCGTTTCCGTGTCGTGAGTGCGGCAAAACATTCGGCAGCCGAAGCTCGCAGCAAATTCACATTCGCATTCACACTGGCGAGCGTCCATATTCGTGTCGCTTCTGCTGGAAGGCGTTCGCCGACGGTGGAACATTGCGCAAACACGAGCGCATTCACACTGGAGAGAAGCCCTACGGCTGCACTATTTGTCCCCGTGCTTTCAATCAGAGaGTCGTTCTTCGTGAGCACGTGAGAGCCCATCATTCCGGACCGGATCCAAAATGCCACGGCAGTATGACACCATATTTATGTAAAGTCTGCGGCGAAACCTACGCCACATCGGACGAAATTGTCGTTCACATAATTCAGCATTGCGACGAGAACACTGCACTGAGACGCCAACCGCAATCGGGTCCCAGAAAATATAAACGTCGACGCAAAGTCAAAAGTCACGACACATCAGTGTCGTCGCGTGTCTCCGAAAGTTACGATCTCATTGACGCTCAATCCGATTCCGACGACAATGCCAAACGAAAAGTCACTCGAAAGACAAAAAATCAACAGCTGCAGCAGCAACAGCAACAATTGCAACAGCAACAATTGCAACAGCAGCAGTTGCAGcaacaacagcaacaacaacaacaacagcatcATCAACAGAATCGTTCGTCGGACGAGAATTATCAAAATGTGCTAAAAACATTCGAGAGTTCGATGCAGAATATAAATATAGTGTCGAAAATAACGACAACGCCGACGACAAAAGGAACGAAGGTgacgaagaagaagatgaagcGTGAGGAGAAGAAAATTGAGGCGCCAATGAATGCGACATTGGGACGTTCGAAGATGATTCACACGCAAAAGACGCGCGTTCCAGTGGAAATTGGCACTGAGGGCGTGAAAAAGGGGCAGAAAACAAAGACAATGATAACGCGAACGCCAAAATTGATAAGCGAAGCGCAACAGCATAAATTGGGAATATTTCCCGGTGGCGAGCGAAATCGACCGCGAACAAAAAATGTCAGCTATCACGTGGAGACGAAGCAATTGACGCCGGCGACATTCCCACTCGAGAAGGAGAACGAGCTCATGGATAAGAGTGTTTCGTCGCCGGAAATTCCGCCCGACACCGAGGAAGACGACGACGACAACAACGAGAACGACGacgacgaagaagaagaagaacaacAAGGGAACGAGAATTCCCTAATTAACGTCAAACTCGAACCGGGTTTGAGAAATAATCACAATCACGAGGAgaagaatttattgaagaaGCGAGCGGTGGGAAAACGGGGGAGAAAACCGAAGGGAATTGTCATTAAACAAGAGCCAAGGGAGGAGGTGATTGAGAGCGAGAGAATTGAGCAGGAAATTTTGGATGGCAATGCAATGGAGGTGGCATTTGAGGCGAATGTCGTGGCTACGGAGGAGTCAATTCTTCCGGATCTTGATAAGGGGAATAATATTGAGACGATGACGACGTCGATGACGATAGCGACAGTGACAGCGACGGAGGAaagtgaagaagaagaagaggaagtgATGACGACGACGAAGCGGAAGAAGAAGGTGGCAGTAACGGCAACAGAAGGATCAGTTGAGACAGAAACTGTTGGGAGAAACATGCTAAAGGAGAATGTGAAGATTAATGTTAAAGTTGAATCGACACCGCAGAGTGTTGTGGCGGCGCATAATTTAATTGCGCCTAGTGACGAGACTGCGGAGACGATTATTCCCGATTCATTGGAGAGTCTTGAGCATACGTGCGAAATGTGCTCGGCAGTGTTTCCAAGTCATGCCGAATTACTCGTTCATGTGCCGATACATATTTGA
Protein Sequence: MDVPEELTLHWAEDVGNVIHEEVCGLETEMVAQEEEVIGACEEVIEEAVEEEVIEQQPEQESNDTEILMVPQSSDMESIYIVPQDQGHDYFNIQVTEEVVADSWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPSRDGLDDDLNDEDPLMNDEEEMTKGRRKKVQSNTPRRRKNNTAAAGGKRSLVVAPGQTAATTTSSSSSNLADDGKEVVGKLMNKSTYNYVAEDIRLMEVASRSTTNNRSAGGNSLASSSRWTDQMTVINDPPRWPITDPTKPYVCQNCGVAFAREKALASHSRIHGGDSPLECSNCGEMYWDLNALREHMKNKHGSTIEIANDQIDGNEAGNYTGDDRFGEFFCDTCGVPFHRLDLLKRHRKTHVKQEMDLNEGPSQQHVCTVCGEWFEEALALLAHAELHARSHNRRCLLCGERCRDDADVAEHVRQNHADDAPPNTCNLCGKTCKDKRSLLKHAWIHNSDKNCNCTKCGKRFHSKARLRRHMLSHRNKNVACDECGEEFADGRTLMSHRHSHNKELGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYSCRFCWKAFADGGTLRKHERIHTGEKPYGCTICPRAFNQRVVLREHVRAHHSGPDPKCHGSMTPYLCKVCGETYATSDEIVVHIIQHCDENTALRRQPQSGPRKYKRRRKVKSHDTSVSSRVSESYDLIDAQSDSDDNAKRKVTRKTKNQQLQQQQQQLQQQQLQQQQLQQQQQQQQQQHHQQNRSSDENYQNVLKTFESSMQNINIVSKITTTPTTKGTKVTKKKMKREEKKIEAPMNATLGRSKMIHTQKTRVPVEIGTEGVKKGQKTKTMITRTPKLISEAQQHKLGIFPGGERNRPRTKNVSYHVETKQLTPATFPLEKENELMDKSVSSPEIPPDTEEDDDDNNENDDDEEEEEQQGNENSLINVKLEPGLRNNHNHEEKNLLKKRAVGKRGRKPKGIVIKQEPREEVIESERIEQEILDGNAMEVAFEANVVATEESILPDLDKGNNIETMTTSMTIATVTATEESEEEEEEVMTTTKRKKKVAVTATEGSVETETVGRNMLKENVKINVKVESTPQSVVAAHNLIAPSDETAETIIPDSLESLEHTCEMCSAVFPSHAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00880676; iTF_00883247; iTF_00882396;
90% Identity: iTF_00883247;
80% Identity: -