Basic Information

Insect: Leptopilina clavipes
Gene Symbol: -
Assembly: GCA_001855655.1
Location: JUFY01031001.1:21392-27121[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3e-05 0.0031 18.4 0.7 1 23 156 178 156 178 0.95

2 15 0.0011 0.11 13.5 1.1 3 23 186 206 185 206 0.99

3 15 0.00023 0.024 15.6 0.0 1 23 339 361 339 361 0.98

4 15 0.026 2.7 9.1 0.1 2 23 368 390 367 390 0.95

5 15 0.00014 0.015 16.3 2.7 1 23 418 440 418 440 0.97

6 15 2.6 2.6e+02 2.9 0.0 1 23 455 477 455 477 0.86

7 15 0.55 57 5.0 0.4 2 23 484 506 484 506 0.95

8 15 0.0017 0.18 12.8 2.2 2 19 514 531 514 535 0.94

9 15 0.00043 0.045 14.7 7.1 2 23 542 563 541 563 0.95

10 15 0.0074 0.77 10.9 0.3 3 23 570 590 569 590 0.97

11 15 9.5e-06 0.00098 20.0 0.4 1 23 599 621 599 621 0.98

12 15 0.00041 0.042 14.8 0.3 1 23 627 649 627 649 0.98

13 15 0.0012 0.12 13.4 0.3 3 23 657 677 655 678 0.95

14 15 0.002 0.21 12.6 0.0 1 23 692 714 692 714 0.95

15 15 0.041 4.2 8.5 0.1 1 20 1140 1159 1140 1162 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3e-05	0.0031	18.4	0.7	1	23	156	178	156	178	0.95
2	15	0.0011	0.11	13.5	1.1	3	23	186	206	185	206	0.99
3	15	0.00023	0.024	15.6	0.0	1	23	339	361	339	361	0.98
4	15	0.026	2.7	9.1	0.1	2	23	368	390	367	390	0.95
5	15	0.00014	0.015	16.3	2.7	1	23	418	440	418	440	0.97
6	15	2.6	2.6e+02	2.9	0.0	1	23	455	477	455	477	0.86
7	15	0.55	57	5.0	0.4	2	23	484	506	484	506	0.95
8	15	0.0017	0.18	12.8	2.2	2	19	514	531	514	535	0.94
9	15	0.00043	0.045	14.7	7.1	2	23	542	563	541	563	0.95
10	15	0.0074	0.77	10.9	0.3	3	23	570	590	569	590	0.97
11	15	9.5e-06	0.00098	20.0	0.4	1	23	599	621	599	621	0.98
12	15	0.00041	0.042	14.8	0.3	1	23	627	649	627	649	0.98
13	15	0.0012	0.12	13.4	0.3	3	23	657	677	655	678	0.95
14	15	0.002	0.21	12.6	0.0	1	23	692	714	692	714	0.95
15	15	0.041	4.2	8.5	0.1	1	20	1140	1159	1140	1162	0.93

Sequence Information

Coding Sequence: ATGACGACAATTGTGGAAGAGACAATGGACGTGCCGGAAGAATTGACTCTGCATTGGGCGGAGGATGTGGGGAATGTCATCCACGAGGAGGTGTGCGGTCTCGAGACTGAAATGGTCGCTCAGGAGGAGGAAGTAATTGGCGCGTGCGAGGAAGTTATCGAGGAGGCAGTCGAGGAAGAAGTTATCGAACAACAACCGGAAGCAGAATCCGGCGACACGGAGATTTTAATGGTACCACAATCAAGTGACATGGAATCAATTTACATTGTACCACAGGATCAGGGCCatgattatttcaatattcaagTCACTGAGGAAGTCGTCGCCGACAGTTGGGACAGATCCGGACCCGACGAtggGGTCGAAATTCCAGAAACAAAGGTCTCACACGACAATTTACTTGAATATGACGATATGGAAATTCCATTGCCAATTGATCAGGATTCATACACAAATACACGTCCGTATCCGTGTGATTTTTGTAGTCGTCGTTTTCGTAAGAAGgcaaatttaatgaatcacATGGTCGCCCATCAAACTGATCGTCCCCATGGTTGTAATCTCTGTGGAGCGCGTTACGTACGCAAATGCGATTTAATGAATCATTTGAAAATCCACGCCTATGCGCCGTCACGCGACGGTCTCGATGACGATCTCAATGACGAGGATCCCCTGATGAACGATGAGGAGGAAACGACAAAAGgtCGACGAAAGAAGGTACAATCGAATACACCACGCAGGCGGAAGAATAATACAGCAAACGCTGGTAAACGTTCGATAATAATCTCAGGTGGAACAACAACCGCTAATACAATCGACGAGGGTAAAGAAGTTGTCggtaaattaatgaataaatccTATAATTATGTCGCTGAGGATATACGACTCATGGAAGTTGCATCGCGTAGTTCAAATAATCGTGGCAATAATTTGGCATCGAGTTCACGTTGGACGGATCAAATGACAGTGATTAATGAACCACCGCGTTGGCCAATAACCGATCCAACCAAGCCCTATGTTTGTCAAAATTGTGGCGTTGCATTCGCACGCGAAAAGGCACTTGCCTCACATTCACGAATACATGGCGGCGACAGTCCATTGGAGTGCTCAAATTGCGGTGAAATGTATTGGGACTTGAATGCACTGAGGGAgcatatgaaaaataaacacgGTAGTACAATTGAACTTGGAATGGATGAAGGAATGGATAATACCGAGACAACATACACAGGCGACGATCGTTTCGGGGAATTTTTCTGCGACACCTGTGGCGTGCCGTTTCATCGATTGGATCTTCTTAAGCGTCACCGGAAAACTCACGTGAAGCAGGAAATGGACCTAAGTGAGGGATCGAGTCAACAGCACGTGTGCACAGTTTGTGGGGAATGGTTCGAAGAGGCATTGGCATTATTAGCGCACGCTGAATTACACGCCCGTTCGCACAATCGTCGTTGTTTATTGTGTGGCGAACGTTGTCGTGACGATGCCGACGTTGCTGAACACGTGAGACAAAATCACGCCGACGATGCGCCACCAAATACCTGCAATCTCTGCGGTAAAACGTGCAAGGACAAACGAAGTTTATTGAAACACGCCTGGATTCATAATTcggataaaaattgcaattgcaCCAAGTGCGGTAAACGCTTTCACAGCAAGGCACGATTACGACGacaCATGTTGTCACATCGTAACAAAAATGTCGCGTGTGACGAATGTGGCGAGGAATTCGCCGACGGAAGAACGCTAATGAGCCATCGACATTCGCATAATAAGGAACTTGGCGGACGATCGTTTCCTTGTCGCGAGTGCGGCAAAACATTTGGAAGTCGCAGTTCACAGCAAATTCATATTCGCATTCACACCGGCGAACGTCCGTATTCGTGTCGCTTTTGTTGGAAGGCATTCGCCGATGGTGGAACATTACGCAAACATGAGCGTATTCACACCGGGGAGAAACCGTATGGTTGCACAATTTGCCCCCGGGCGTTCAATCAAagagtcGTTCTTCGTGAGCACGTGCGAGCCCATCATTCGGGTCCCGATCCAAAATGTCACGGCAGCATGACGCCGTATTTATGTAAAGTTTGCGGCGAAACTTATGCAACATCAGATGAAATTGTTGTCCATATTATTCAGCATTGTGACGAAAATACAGCACTTAGACGACAACCGCAATCGGgtccaagaaaatataaacGTCGACGTAAAGTCAAAAGTCATGATACATCAGTGTCACGTGTCTCGGAAAGTTACGATCTTGATGGACAATCGGATTCGGATGATAATGCGAAACGAAAAGTGACACGAAAGGCAAAACCCCAACAGCAACAAATTCAACAtcaacagcaacaacaaccAATTCGTTCAACGgaggaaaattatcaaaatgttCTGAAGACGTTTGAAACTTCCCTTCAGAATATAAACTCACTGGGTGTTAtaacaaatacaaaattgaCACCAACAAAAACGCCTAAAGtaacaaagaagaaaattaaacgtgaggagaaaaaaattgatccacCGTTGAATGCAACATTGGGACGTTCGAAAATGATACACACGCAGAAGACTCGCGTGCCAGTTGAAATTGGAACCGAGGGAGTGAAAAAGGGACAGAAGACAAAAACAATGATAACCAGAACTCCGAAATTAATGACCGAGGCACAACAACACAAACTCGGGATATTCCCCGGCGGTGAGAGAAATCGACCGAGGACAAAAAATGTCAGTTATCATGttgagaataaaattcaaatcacACCGGCAACATTTCCAATGGATAAGGAAAAGGAAAATGAAATGCACCTCTTGGATAAGAGTGTATCATCGCCGGAAATACCGGCCGATGATGATGACAATCACGATAATATTGAACCGCCAATTGTCAATGTTAAATTAGAACCTGGCTTgagaagtcaaaatcataatcaCGAGGAAAAATCGACAACACCGACAAAAAAGCGGATTGTTAAGAGAGGAAGAAAGCCGAggaatattacaattaaacaAGAACCAAGGGAGGAGATTGCTGATGATCAGGAAATGATGCAAGAGACCACGGAGGATTTGAATGCATCAGTTGAGATGGAAAATGAAGGCGAAGAGGAAAGAATGAACGTTGAACATGAAATTGTCGATGGGAATGCAATGGAAGTGGCTTTTGAGGCGAATGTCGTTGCAACTGAGGAGTCAATTCTTCCTGATCTTGATAAGGAGAATAATGCGGAAACGACGACGGCGGCGACGACAGTGACGACAACAACAGAGGAATCGAATTTGGGAAAAGAGAGTGtgaaaataaatgtgaaaGTTGAATCGACGCCGGAACGCGTTGTGGCGGCGCATAATTTAATAGCGCCTAGTGATGAGGCGGCGGAAACAATAATTCCCGATTCGTTGGAGAGTCTTGAGCATACGTGCGAAATGTGTTCGGCAGTGTTTCCAAGTCACGCTGAACTTCTCGTTCATGTGCCGATACATATTTGA
Protein Sequence: MTTIVEETMDVPEELTLHWAEDVGNVIHEEVCGLETEMVAQEEEVIGACEEVIEEAVEEEVIEQQPEAESGDTEILMVPQSSDMESIYIVPQDQGHDYFNIQVTEEVVADSWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPSRDGLDDDLNDEDPLMNDEEETTKGRRKKVQSNTPRRRKNNTANAGKRSIIISGGTTTANTIDEGKEVVGKLMNKSYNYVAEDIRLMEVASRSSNNRGNNLASSSRWTDQMTVINEPPRWPITDPTKPYVCQNCGVAFAREKALASHSRIHGGDSPLECSNCGEMYWDLNALREHMKNKHGSTIELGMDEGMDNTETTYTGDDRFGEFFCDTCGVPFHRLDLLKRHRKTHVKQEMDLSEGSSQQHVCTVCGEWFEEALALLAHAELHARSHNRRCLLCGERCRDDADVAEHVRQNHADDAPPNTCNLCGKTCKDKRSLLKHAWIHNSDKNCNCTKCGKRFHSKARLRRHMLSHRNKNVACDECGEEFADGRTLMSHRHSHNKELGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYSCRFCWKAFADGGTLRKHERIHTGEKPYGCTICPRAFNQRVVLREHVRAHHSGPDPKCHGSMTPYLCKVCGETYATSDEIVVHIIQHCDENTALRRQPQSGPRKYKRRRKVKSHDTSVSRVSESYDLDGQSDSDDNAKRKVTRKAKPQQQQIQHQQQQQPIRSTEENYQNVLKTFETSLQNINSLGVITNTKLTPTKTPKVTKKKIKREEKKIDPPLNATLGRSKMIHTQKTRVPVEIGTEGVKKGQKTKTMITRTPKLMTEAQQHKLGIFPGGERNRPRTKNVSYHVENKIQITPATFPMDKEKENEMHLLDKSVSSPEIPADDDDNHDNIEPPIVNVKLEPGLRSQNHNHEEKSTTPTKKRIVKRGRKPRNITIKQEPREEIADDQEMMQETTEDLNASVEMENEGEEERMNVEHEIVDGNAMEVAFEANVVATEESILPDLDKENNAETTTAATTVTTTTEESNLGKESVKINVKVESTPERVVAAHNLIAPSDEAAETIIPDSLESLEHTCEMCSAVFPSHAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00881476;
90% Identity: -
80% Identity: -