Basic Information

Insect: Leptopilina clavipes
Gene Symbol: RREB1
Assembly: GCA_001855655.1
Location: JUFY01035252.1:135241-145997[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0001 0.01 16.8 0.3 1 23 68 90 68 90 0.98

2 14 0.00096 0.099 13.7 0.3 1 23 96 119 96 119 0.96

3 14 0.0037 0.38 11.8 1.0 1 23 196 219 196 220 0.93

4 14 1.4 1.4e+02 3.7 0.9 1 19 303 321 303 323 0.90

5 14 0.0049 0.51 11.4 0.1 1 23 437 459 437 459 0.96

6 14 8.5e-06 0.00088 20.1 1.6 1 23 468 490 468 490 0.98

7 14 0.008 0.82 10.8 2.6 1 23 496 519 496 519 0.97

8 14 0.00061 0.063 14.3 1.9 1 23 914 937 914 937 0.97

9 14 0.0017 0.18 12.9 0.8 3 23 1201 1221 1199 1221 0.97

10 14 0.49 51 5.1 4.8 1 23 1227 1250 1227 1250 0.97

11 14 0.0076 0.78 10.8 1.5 1 23 1291 1315 1291 1315 0.97

12 14 4.3 4.4e+02 2.2 3.4 1 23 1395 1419 1395 1420 0.95

13 14 0.086 8.9 7.5 0.2 2 23 1466 1487 1465 1487 0.94

14 14 0.0038 0.39 11.8 4.1 3 23 1495 1515 1493 1515 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0001	0.01	16.8	0.3	1	23	68	90	68	90	0.98
2	14	0.00096	0.099	13.7	0.3	1	23	96	119	96	119	0.96
3	14	0.0037	0.38	11.8	1.0	1	23	196	219	196	220	0.93
4	14	1.4	1.4e+02	3.7	0.9	1	19	303	321	303	323	0.90
5	14	0.0049	0.51	11.4	0.1	1	23	437	459	437	459	0.96
6	14	8.5e-06	0.00088	20.1	1.6	1	23	468	490	468	490	0.98
7	14	0.008	0.82	10.8	2.6	1	23	496	519	496	519	0.97
8	14	0.00061	0.063	14.3	1.9	1	23	914	937	914	937	0.97
9	14	0.0017	0.18	12.9	0.8	3	23	1201	1221	1199	1221	0.97
10	14	0.49	51	5.1	4.8	1	23	1227	1250	1227	1250	0.97
11	14	0.0076	0.78	10.8	1.5	1	23	1291	1315	1291	1315	0.97
12	14	4.3	4.4e+02	2.2	3.4	1	23	1395	1419	1395	1420	0.95
13	14	0.086	8.9	7.5	0.2	2	23	1466	1487	1465	1487	0.94
14	14	0.0038	0.39	11.8	4.1	3	23	1495	1515	1493	1515	0.98

Sequence Information

Coding Sequence: ATGAATCGTCAACGTACCTGGCAGTGCTATAGCCTCTTTGGTTGGAGGGTTGGAGGTTACGGGTGGATTGGTCAATCGAAGAAATTGCATTCTTTTCCAACGAGTTCATCAATTCTTTCTTCATCTTATCGAGATTTATCGAATCATCAGATTGAAAATCATAATTCTCCTGAAAGTATTGACAGTGCCATTGAAGAAGAATTCACTTGTAAAGTATGTTACAAAGTATTAAGATCAGCGAGTTCCTTGGACCGTCACATTCTCGTGCATTCTGATGAGCTACCCTTCAAATGTAATCCTTGCGACATGGCTTTCACCAGCAACGGAAACATGAACAGACATTCGAAAATTCCTCATCGTCTCTCATCTCACAGTTGTTCTGATTCGGAGGCCAGCAATGATTCAGAATCACCCTCGAAGAAAATTGAGGAgtacaataataatgaaattgccAAAAGAAACTCACCGGATCTCATCGATGAAAATGAATCTCTAAGTTTGCTGAAGAGAAAGTCCCTTGATTACACTGAGGATCTTTCGCCgcagaaaaaattcaaaaacaatttatcaGAGACCCAGACAAATTTCACTTGTCCTATTTGTGGAAAGCAAGATTTCGCCTCCAGTTCACTTTTGGAAATACATCTTGAACATCATCACTTGGAAATTGATAAATGTGAATCGGATAATCTGTCCTACAAATGCCACAGGGTTCTCAATCTCCATCGATCGGTGAACAATCTGAATGAGAATTCTTACAGAAATGCCACCAGAAACTTGAGACATTCAGTGGAGGGTTTTGGTGATTTGACATTTGTCGATTTCACTTCAACCAAATATCCCATGATTGCGAGAGCAAAATGCGAAGAATTTCTCCACAGACCAGCATCGGGAGAAATGGCCAAGTTCCAGTGTACAAAATGCCTGAGAGCTTTTCCCTGCAAGTCAGCTTTGGACTCCCACGAAATGGATTGTGGAATTCCAAATGTTCACTGGAAGGGAAATGACGCCCAATCGAGGAGGGATGACTTCTTCGCGGGATTGAATCTTCAAAACAAAGCTGCCATGACAGAAGCGAAAGACGGAAAGGATCTTGCTGACATTCAAAGTATCATCAGCATCACATCAAGTCCAATTCTTCACAGTTTCTCAAGATCGGACGCAAGTACTCCGGACAATTGTAGcaacaaaattaatcaaaatgttGGATCGTCTGGTTCATCGGGAACTGTTTCATCCGAATGTAATGAGGAGGAAACACAAGACGCGTTCGCCGCTGAATTCagaaaaatgaaactaaaagGCGAATTCCCCTGTAAACTTTGCGATGCGGTGTTTCCAAATTTGAGGGCCCTGAAGGGACACAATAGAGCTCACATGGGAGTTCCACCTGGAATGCCTTATCCATGTAACATCTGTAATTACACCAGCACTGATAAAACAACTCTCACAAGGCATCTAAAGACGCACAATGGCGACAGACCTTTCGAATGTGCACAGTGTACTTACGCCTTCACCACAAAGGCCAACTGCGAGAGACACGTGAGAAATCGTCACGGAATTCATGATAAAAATGAAGTACAGAagacaattatttatcatcCAACTGAAGATCTGACGAACGAGAGTCTCGACAGGAGCATTCCCAGAGTTGTCAAAGATGAAGTGAGAAAAACTCTCGTCTTTcccaaagaagaaaattatcacaATTCCTATACTGTGATGCACATGCATCAGGATATGAAGATCAAGGACGAAAAGAAGCCCGAGTCGAGTATTAATCCCCCATCTCAGTTAAATCAGCTGAACCATTTGAATCCCTTGAATCACATCAGTCAGCTGAATCAGATAAATCACATGAACCAGATTAACATGCAAGCTAACCATTACGAACAGTCGGAAGTATTTCCCAGACCAAGGTCGGTCCAACCTTTAGAGTTGACCTACAGAAATTCTCCACAGCATCCAATCATCAAGTCTGAAAATTCCAGGGTAGAGGAAGATCTCGAGTCGAGATCATCGGAGGGCAGCGTATCTCTAGTCAGTGAAACCAAACCGGACACACACCAAAGAATTCAAGCAAATCCGATGAACTTGAAAAAATCGAGTGATTCCACAGCTACCTCAAGCGACGATGGACCCTTGGACCTCTCAATGGATGTACTTGATCTTAGCAAGAAATCAAAAGACAGGGAAGTAAACGGCAACACTGAAGAACATGTCGAGGATCAGAAAGATTTTTACAACTCGGCGAATCCTCTCCTCTTGACACAAGCCCTCCTCAAGGCGCGTCAAGTCAATTCACCGCCAACATCATTGGAAGCTTTATATGCCAACGCTCATGCAAACATGATCTACAACAATTTGGCTCTCAGTTCCGGCACTGGTCTCATCTCCCCCTATTTTCTCAATTCCATTTTCGAGCAAGGCTACGCCATGAAGGAGAGATTACAAAAAGAACTAGCCCGGGGTCTGCAGACCAGTGGAGGTTCCTTGGTAGAGCAACCAACTGAAAATCCAGCATTCAGCAACAATTACCCTCCAACGGGAAGAACATCTCAGCCTAGGGAGGAGCAACTACCTTATCCCAATCTAATTCAGCCAAATGTATCGAGTAGAGTTGTTTCACCCAGGGAAAGAATCAGCGAATCCCCATCATCGAATTCAGTGAAAATGGTCATCAAAAATGGTGTTCTTATGCGCAAACAAAAGCAAAGACGATACAGAACCGAAAGACCATTCACCTGTGAATATTGCTCGGCAAAGTTCACCCTCAAGACCAACATGGAGAGACATATCAAGCAACAACACAATGAACTGTGGCACCGAAGACCCAGAGGTGGACACTCGACCAGAGGACGACCTCCAGCGAGACCTCCAACCCTACTCCAAAATATCGGTTCAAGTTCTCAATCTTTTATGCGAAGCAAACCTTCCTATGAACCTCCAACTACAACAAAAGAAGAGGATTATGGACGACATCCCATTTCCGATCAAGTCAAGTACGCAATTCTGGCTCAGCAACTTAAGGGCAATAAAGCTGAGGAACAAGGACAAGATTCCGACGAAGAATTGGTCATCGATGAGGAAGCTTGCGCAGAACGGGAACAATCTAAATCCATGAGTTTACTGCGAGGCAAATTGGAAAATTCTGAAACCAAAGAAtgtaaagaagaagaagaagaagatgatgacgatgatgatgaagatGATAATGATTCTCAACAAGTGGAACTCAAGAACGAAAAATTGACTCTAGCAGAAAATGAGAATGGAGAGAAAGAATCTATTTCCAAAGGAGAAAATTCTGAAGAAACGCAAGAAGCTGAAACGACCGTGAAAACTGAAGAAGAAGCTATTGATCTTGCCAGTGTTCCAAAACTTATTCAAACCGCCTCTCAGAAATATCCCCAGTTTAAATCCCAGTATTTAAGTGACGAGGACGGTGTTCCTCATTCTAATAGTGAACATTCCGGTAATCATTCTGGCAGTACTGATGAGAAATCAGAAAATTCCGCCAATTTAACATcacttaagaaaaaaaagaagaagaagaaaatgaaggcCTCTGCATATTCCATGGCGCCAAACAGAGTCATCTGTAAATATTGCCATCGAGAATTCCCCTGGATTTCATCACTCAGAAGACATATTCTCACTCACACTGGAGTTAAACCCTACAGGTGTGATTATTGCATGCTGGACTTTACCACCAAATCAAATTGTGATCGTCATTTGAATCGAAAGCACAAGAGTTTGCTCCAGCGTTCAAATGCCCGAAACATTAGAAATTCTTCTTCCCCTGATAATCAAGATTCAAGAGTGACAAATAATAACAGTTTCTCAACGAGAAACGTTCCTGAAAGACCATACAAGTGCAATCAGTGTCCCAGTTCAACATTTGCAACATTGGGTAATCTGAAGAAACACCGTTCCACGAAGCACTCGAGAAAAATGAATTCCCGATCTGAAACGTCTTCCAGCGATCCTCAGCACTCGGATCATTGTCAAAAGCAAAATGATCACAGTGGAGATGATGGTGGTTCTTCGAGTTCGGAGAATGTTGAGAATCCACCAATGGAAGTTCATAAGACGAATCAAAATACTTCTTCCTCGGCCAACGAAAATCCCAGATCGTGTCGAACTTCACCGACCTCTTCTCCAGGACCAACTGACACACCTTTCAAATGTCACATTCCAAATTGTGACAATGGCTTTGCTGAACGTCAGGACTGTCTTGATCACATCAGAATGCATCACGAGAGGGAGTATGAGATTTTGGTGTCCAAAGGTGCTTTGCAAATGGGAATCACTTCCGCTGAGGAGCAACAACCTCCACCCAATCAACACTCGAGCGATGGTCCCAGATCTCTCGACTACAAAGACAGAAAGgTTGTCTGCGCTTTCTGCATGCGACGATTTTGGTCTGCTGAGGATCTTCGTCGTCACGTGAGAACTCATACAGGTGAAAAGCCATTCTGGTGTGATATTTGTGACAGGAGATTCACTCTGAAACACAGTATGCTTCGTCATCGAAAGAAGCATGAATCAGTTGACTCGACAATGTACATTGGCAGTGGTGATGAAGAAATTTCTCCAAATCAACCTCCAACAATCACTCCAAGAAGTCAACAGCAATCTCCAGCTTCAATTGCAGCAACTACTGGCAATTCAATGATTGCTGAAAGAATGTCCTTACCAACTGTAGCGACGATTGCTACTGGAGATGCTGCTCCAAGTAGTCTAACAAGGTTCAATCCTTACGAGAAACTAGCGACTCTGACTAGTAAATTATCAAATGTCCAGAGCAATCATGATGCAACGGAAACAGGTAATGATCTGATCTCCAATTTACTGGGAATAAAAGATCCTGGTATTGTCGATAAAATGCTTCTTGCTACTCCTGACGATGCTGCAAAACTATTGGGAGTCAAGGGCAATagtgagtaa
Protein Sequence: MNRQRTWQCYSLFGWRVGGYGWIGQSKKLHSFPTSSSILSSSYRDLSNHQIENHNSPESIDSAIEEEFTCKVCYKVLRSASSLDRHILVHSDELPFKCNPCDMAFTSNGNMNRHSKIPHRLSSHSCSDSEASNDSESPSKKIEEYNNNEIAKRNSPDLIDENESLSLLKRKSLDYTEDLSPQKKFKNNLSETQTNFTCPICGKQDFASSSLLEIHLEHHHLEIDKCESDNLSYKCHRVLNLHRSVNNLNENSYRNATRNLRHSVEGFGDLTFVDFTSTKYPMIARAKCEEFLHRPASGEMAKFQCTKCLRAFPCKSALDSHEMDCGIPNVHWKGNDAQSRRDDFFAGLNLQNKAAMTEAKDGKDLADIQSIISITSSPILHSFSRSDASTPDNCSNKINQNVGSSGSSGTVSSECNEEETQDAFAAEFRKMKLKGEFPCKLCDAVFPNLRALKGHNRAHMGVPPGMPYPCNICNYTSTDKTTLTRHLKTHNGDRPFECAQCTYAFTTKANCERHVRNRHGIHDKNEVQKTIIYHPTEDLTNESLDRSIPRVVKDEVRKTLVFPKEENYHNSYTVMHMHQDMKIKDEKKPESSINPPSQLNQLNHLNPLNHISQLNQINHMNQINMQANHYEQSEVFPRPRSVQPLELTYRNSPQHPIIKSENSRVEEDLESRSSEGSVSLVSETKPDTHQRIQANPMNLKKSSDSTATSSDDGPLDLSMDVLDLSKKSKDREVNGNTEEHVEDQKDFYNSANPLLLTQALLKARQVNSPPTSLEALYANAHANMIYNNLALSSGTGLISPYFLNSIFEQGYAMKERLQKELARGLQTSGGSLVEQPTENPAFSNNYPPTGRTSQPREEQLPYPNLIQPNVSSRVVSPRERISESPSSNSVKMVIKNGVLMRKQKQRRYRTERPFTCEYCSAKFTLKTNMERHIKQQHNELWHRRPRGGHSTRGRPPARPPTLLQNIGSSSQSFMRSKPSYEPPTTTKEEDYGRHPISDQVKYAILAQQLKGNKAEEQGQDSDEELVIDEEACAEREQSKSMSLLRGKLENSETKECKEEEEEDDDDDDEDDNDSQQVELKNEKLTLAENENGEKESISKGENSEETQEAETTVKTEEEAIDLASVPKLIQTASQKYPQFKSQYLSDEDGVPHSNSEHSGNHSGSTDEKSENSANLTSLKKKKKKKKMKASAYSMAPNRVICKYCHREFPWISSLRRHILTHTGVKPYRCDYCMLDFTTKSNCDRHLNRKHKSLLQRSNARNIRNSSSPDNQDSRVTNNNSFSTRNVPERPYKCNQCPSSTFATLGNLKKHRSTKHSRKMNSRSETSSSDPQHSDHCQKQNDHSGDDGGSSSSENVENPPMEVHKTNQNTSSSANENPRSCRTSPTSSPGPTDTPFKCHIPNCDNGFAERQDCLDHIRMHHEREYEILVSKGALQMGITSAEEQQPPPNQHSSDGPRSLDYKDRKVVCAFCMRRFWSAEDLRRHVRTHTGEKPFWCDICDRRFTLKHSMLRHRKKHESVDSTMYIGSGDEEISPNQPPTITPRSQQQSPASIAATTGNSMIAERMSLPTVATIATGDAAPSSLTRFNPYEKLATLTSKLSNVQSNHDATETGNDLISNLLGIKDPGIVDKMLLATPDDAAKLLGVKGNSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00880008;
90% Identity: iTF_00882444;
80% Identity: -