Lcla010527.1
Basic Information
- Insect
- Leptopilina clavipes
- Gene Symbol
- dmd-4
- Assembly
- GCA_001855655.1
- Location
- JUFY01022698.1:6344-8586[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-26 7.6e-22 77.5 10.5 1 47 20 66 20 66 0.99 2 2 1.5 1.3e+04 -3.3 0.3 3 8 367 372 366 374 0.74
Sequence Information
- Coding Sequence
- ATGCTTCGTggaaaatcaaagaaattagAAGATAATGATGATTCGAATGCTAAACAAAGAAAACCTAAATGTGCAAGATGCAGAAATCATGGATTGATATCTTGGTTGAGGGGACACAAAAGAGAATGTCGCTATCGCGATTGTTTTTGTGTAAAATGTTCTCTAATTGCTGAACGTCAACGAGTTATGGCTGCACAGgtCGCCCTAAAACGACAACAAGCTGCCGAAGATGCGATTGCTCTTTGTATGGCAAAAGTAACGACAGGGCAGAAAATTAATCGTCTACCACcgggaaaaatatttggtaTGACAGTAACAGATCCCgatacgaataaaaaaaataaagaggaaaatCCCGATACGACAAGTTTatcaaatgacaaaaattcgCCCGAGGATGCTGGCAATTGTATCGAAAATGAAGATCACAATATTTTTGAGCAAAAAAATCAAgagaaaaatgaagaaacgAAGACTGAATTTGAAACTGGTAATAGTCTCTTCCCGAAAATAaaggagaaattaattaataaaacggATTACGCCGTGTCTCAAACATCAATGGAAACTCTTATTCGACTATTTCCAAATACAAAACTTTCTGTACTTCAATTGGTATTGCAAAGATGTGGTCAGGATCTCCTCAAggcaattgaatatttttcttgtaacGAGAAATCTGCAACTATTGATTCCCATTGTCCTGGAGTTTCTGCTTTTCATCCGCCAAAAGTCGACCGACTCCCGGAAGTCCTTAATCCAGATATGAAAAATCCATCAAagACTTTCACTCTGCCTCCACTGCATCCAACAAATCATTTGGGCGAAAGTTATTGTCTTTTGAACGTAATATCCGAACCAGTaacaaagaattttgaaaGCACCAGCTTCTGTGGAAACAGTTTTCCCTTTGGAAAATCGGGAACCTCGCGAATTGATCGCGAGAGCATTGCTTTAAATTTGCAGTATAATCATTACTTTGACTCGGGACTGTCATATAATCATCAATTACGTGAACATCATCAGTTTGCAGATTTTTCTCAAAGGCCGAGTATACTGCATCTTCCACCTTTCATTCCAAATATTCCTTGCGTTCAACCCAATTGCTTGCTTTGCTAcaagttttcataa
- Protein Sequence
- MLRGKSKKLEDNDDSNAKQRKPKCARCRNHGLISWLRGHKRECRYRDCFCVKCSLIAERQRVMAAQVALKRQQAAEDAIALCMAKVTTGQKINRLPPGKIFGMTVTDPDTNKKNKEENPDTTSLSNDKNSPEDAGNCIENEDHNIFEQKNQEKNEETKTEFETGNSLFPKIKEKLINKTDYAVSQTSMETLIRLFPNTKLSVLQLVLQRCGQDLLKAIEYFSCNEKSATIDSHCPGVSAFHPPKVDRLPEVLNPDMKNPSKTFTLPPLHPTNHLGESYCLLNVISEPVTKNFESTSFCGNSFPFGKSGTSRIDRESIALNLQYNHYFDSGLSYNHQLREHHQFADFSQRPSILHLPPFIPNIPCVQPNCLLCYKFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879654;
- 90% Identity
- -
- 80% Identity
- -