Basic Information

Insect: Leptopilina boulardi
Gene Symbol: L
Assembly: GCA_011634795.1
Location: PHTE01000600.1:109788-122178[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.4e-05 0.0015 19.2 1.3 1 23 97 119 97 119 0.98

2 20 0.46 50 5.1 3.9 1 23 125 147 125 147 0.97

3 20 1.1e-06 0.00011 22.8 4.1 1 23 153 175 153 175 0.99

4 20 0.00012 0.013 16.3 0.4 1 23 181 203 181 203 0.98

5 20 0.0034 0.37 11.8 0.1 2 23 347 369 346 369 0.95

6 20 0.16 18 6.5 0.0 3 23 380 401 378 401 0.88

7 20 0.2 22 6.2 0.1 3 23 458 478 457 478 0.97

8 20 0.0016 0.18 12.8 0.3 2 23 491 512 490 512 0.97

9 20 0.0053 0.57 11.2 0.4 1 23 521 544 521 544 0.93

10 20 3.6 3.9e+02 2.2 0.2 1 23 549 572 549 572 0.91

11 20 0.23 24 6.0 2.2 2 23 641 662 641 662 0.96

12 20 0.0051 0.55 11.2 0.1 1 23 667 690 667 691 0.94

13 20 4.5 4.8e+02 2.0 0.1 2 23 751 774 750 774 0.81

14 20 4.9e-05 0.0052 17.6 1.0 2 23 790 812 789 812 0.96

15 20 0.04 4.3 8.4 1.0 1 23 821 844 821 844 0.93

16 20 0.015 1.7 9.7 0.1 2 23 1031 1053 1030 1053 0.92

17 20 0.52 55 4.9 0.2 1 23 1059 1082 1059 1082 0.95

18 20 4.3 4.7e+02 2.0 0.4 2 23 1095 1116 1094 1116 0.92

19 20 0.47 51 5.0 0.1 2 23 1125 1147 1124 1147 0.93

20 20 0.18 19 6.4 0.4 1 23 1154 1177 1154 1177 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.4e-05	0.0015	19.2	1.3	1	23	97	119	97	119	0.98
2	20	0.46	50	5.1	3.9	1	23	125	147	125	147	0.97
3	20	1.1e-06	0.00011	22.8	4.1	1	23	153	175	153	175	0.99
4	20	0.00012	0.013	16.3	0.4	1	23	181	203	181	203	0.98
5	20	0.0034	0.37	11.8	0.1	2	23	347	369	346	369	0.95
6	20	0.16	18	6.5	0.0	3	23	380	401	378	401	0.88
7	20	0.2	22	6.2	0.1	3	23	458	478	457	478	0.97
8	20	0.0016	0.18	12.8	0.3	2	23	491	512	490	512	0.97
9	20	0.0053	0.57	11.2	0.4	1	23	521	544	521	544	0.93
10	20	3.6	3.9e+02	2.2	0.2	1	23	549	572	549	572	0.91
11	20	0.23	24	6.0	2.2	2	23	641	662	641	662	0.96
12	20	0.0051	0.55	11.2	0.1	1	23	667	690	667	691	0.94
13	20	4.5	4.8e+02	2.0	0.1	2	23	751	774	750	774	0.81
14	20	4.9e-05	0.0052	17.6	1.0	2	23	790	812	789	812	0.96
15	20	0.04	4.3	8.4	1.0	1	23	821	844	821	844	0.93
16	20	0.015	1.7	9.7	0.1	2	23	1031	1053	1030	1053	0.92
17	20	0.52	55	4.9	0.2	1	23	1059	1082	1059	1082	0.95
18	20	4.3	4.7e+02	2.0	0.4	2	23	1095	1116	1094	1116	0.92
19	20	0.47	51	5.0	0.1	2	23	1125	1147	1124	1147	0.93
20	20	0.18	19	6.4	0.4	1	23	1154	1177	1154	1177	0.91

Sequence Information

Coding Sequence: ATGCTATTCAAAGGAAATAGTTCAAGATTGGaacttttaattggaaaaattcaagCACACAAAGATCCACAATCACCATCTAGAGACGATAAGTGcaacattaaagaaaaagaggcCCTTGGAACTGGAAGTTCGTCTTGGCATAGTGAAGACGGAAGGCCAACATCACGTAAAGGAGAAGAAACGCCATCTTCTTGCGCGACACCAACTTCCACGAGTTTCCCCTCTGAACCGGAAGTCGAAGCTGATATTAGTCAAACTGTCGATGGTAATAATCCAGCTGCACCATATCCTTGTCAATTTTGTGATCGAATGTTTCCACGATTGAGTTATCTCAAGAAACACGAACAgagtCATGGTGATCAGATGCCATACAGATGCAGTTGGTGCGCAAGATTATTTAAACACAAACGAAGTCGTGATCGTCATGTTAAATTGCACACTGGCGACAGGAGATATCGATGCTCGCACTGTGAGGCCGCATTTTCCAGAAGTgatcatttgaaaattcacatGAAAACCCATGACACACAGAAGCCATTTCAATGTACATCATGTTCCCGAGGATATAATACAGCAGCTGCTCTAACATCTCACATGCAATCACATAAAAGACATCAAAATACCCAAGgatcaaaattagaaatggATTTTGGTCGTCGAAGTGTATCATCCCATAGTACAGCATCACCTCCAATTCCAAATTCACCATcaccgaatttaaatttaacacttaatcataaatcaataaaatcacAGGCAAGTGCCTCAACAACGCCAATTTTATCGCCTTTGAAATTAACATGCATGTATTGTACACGTGATTCCTTCACCAGTATGCAACAACTTCAACTTCATGTTCATACAATGCATCAAGCAATTTTAAGTGGAGAAAATCTAATGCCATCACCAGGTCAAACTGCCGAATTatcaaatcatcaaaaaattgacagaaatagagaagttatattttatgcaaaaaaatttccggaTGATAGAAATTCCCTACAGGAGAAAGATTTATATGAATCATCACTCACTTGTGGTCAATGTACAATGAAATTCGCATCACCTAATTTATTACGAGAACATTTAATATCAATTCATCGTGTCGATGGATTAGGATCATTGATGATTTGTCCACTATGTGGAATTCCATGTTCATCAGCAGCAGCATACGCTGAGCACTATGTACTTCAACATTGTGAAGATAGAAGATTATCCGAGGCACGTGAATATGGTGATCCAAAATTAAATGGATCCTATGATATCAAACAAACAAGAGCAAAAATTGCCAAAGATTTTGAACCCGCCGATTTAACCAATAAACATTTGAAAccgaatgaaaattattcagcCGGAACACTTTTATGTGGACAATGTGGAGCAgcattaaaagattttgaatcaTTTAGAGAACATTTGGCGAGACATCTTAAAGCagatcaaaaaaatgaaacaccaCGAAATCAATGTCCAAAATGTGAGGCCAATTTTTCAGATAGAGAAGAAATGATGGTGCATTTAACAAAACACTTTTTAGGACAAGTCACTAAGGAATATGCTTGTAAtgcttgtaaaaaattataccccCATCCTGATCTTCTTCAACGGCATTTACTCGATTCACACGCACATCATTTATATCGTTGTGCACTTTGTAGAGATACTTTTGATTCTCGTGTAGCTATACAAGTTCATTTTGCCGTTAAACATAGTCAAGAGTGTCGTATCTATCGCTGTAATGTTTGTTCAATAAACAACGAAAATTCCCCTGGCAATGCACCAGTGGAAAATATGAATTTCTTCAGAAGTGAAGCCGAAATGGCAAATCATGTAAGAACAGTACACGCACCTCCGTCCCATGTTAATGAAAGTCCATTACCACGAAGTCCTGCCTCAACTCCAGGTATCACAAATAGATGTGTTTTTTGTGGAATTTGTtgtaattcagatttagatcTTCAACTTCATATGGCAAGTCATTCGACAAATTTATACAGATGTCCTATATGTCGTGAGGGTTTTGCCGTTGAATTTCTTCTCGATCGTCATATTGCACAGGTTCATCATTCCAATCATACAAGGGAAAATGGTCGAATTCATCGTCCATCGAGATCACAGGAGGATGTTAATTCCGAGACAAATAGAGAACAAAGAACAAAACGTGGTCGTTCACCAGCGTcgagtaataataattcactaAATCAACGTGACAACAATAAGAGACCAAATTATGGAACTGTTCAACAATGTGAACTTTGTGAACGTGGTGAATTTACAAATGATGCTGAACTTCAAGCACATAAAAAATTAGCTCATACACCATCTAAAGTTCAGGGAAAATCAATGTCATCATTGAGTATGACTTGTGCCTATTGCGGTGAAGTTTGTCGCTCGCGTAGTGAATTAGAATCACATACTAGAATACAGCATGCAACCAATGAGCATGGTGGTCGtcataaatgtaatatttgtgATGAAGTCTGTCCATCAGGTGCAACACTCGCTGAACATAAACTTCAGAAACattgtaaaatacaattaagtGATGTCTGCATTGTTTGTCGTGGTACATTACATTCggaatcacaattttttgaacatgTTCAAAGACACAGTTTGGAGAATGTTGATCCACAACAGAGATTGGATAGTTCACTTCCACATTTGCCAGCACCTTGCGTTGTATGTAGACAAACATTAATTAGCGATCTTGAAGTGAGACTACACGCCAAGCATCATTTAAGATCAAATTCAGGATCCCAAAATTCTGAAAGTCCAAGTCCAAAACACAATAAATCATCAACTCACAATTGTTGTCTTTGTCTCAGGGAATTTAATGCCGAGGAATTTGTTAGTTTACCATCAAATCATTCAACTAATTCCGCTAATTCTCATCTATTTGTTTGTAAAGCATGTTACATGAGGCATTCACAAGGTCTTCCAATATTAAACTACGGACATCCAAGATCAAAAAGCGAATTATGGTTAAAGGAGACACAATGGGAAAATGCTTCTAGGGAAAAATGGAAtggaaattacaaaattgaagaaaaaacatCTGATGTTGGTACAAACGATGTAATGAGATGTGAagaatgtaatattaaatttgaagattCAGAGGAAGCTGAAAAACATCGAATTGAAGAACATAAACCATTGGGTACATACACGTGTATACAATGCCAGGTGTCTTTTCCAACGGAAGCTAAAATTCAGGAACATGTAAAGAAAGAACATCTTGAATCATCGGGAAAAGAATCATTGGAAGCATTACGTTGTCATCTTTGTTTATTTGATGCCAATAGTCCACTACAATTGCAAAGTCATCTAATAGAGCATACTTTTGCCGGATGTACTGCATTAAGTTGCTATATTTGTCAGTCATTATTTACAGCACCCATTGGACTtcagAATCATATGCTCCAACAACATGGATTGGGAGCTCGTCCATACGACTGTAACaattgtgaattaaaatttttctttcgagCCGAACTTGATCAGCATGTGGGTGTTTTTCATTCTGCGCGTGTTCCATCACcaaaagatgtaaaaaaaattgagaatggTATTCAGGAACACGATATAGAAATTCACGAGAAAATAACAGTAAAAGAGGAAATTCAtcaaatcaatgaaaatgatgaaatcACTGTTgatgttaatgaaaaatatgaaaatcaagaaacaaatactattaatatggaaaatattcaTTCTGACAAAGTTTATACTGAACAGATCAATGATTCTGagtcgtaa
Protein Sequence: MLFKGNSSRLELLIGKIQAHKDPQSPSRDDKCNIKEKEALGTGSSSWHSEDGRPTSRKGEETPSSCATPTSTSFPSEPEVEADISQTVDGNNPAAPYPCQFCDRMFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDTQKPFQCTSCSRGYNTAAALTSHMQSHKRHQNTQGSKLEMDFGRRSVSSHSTASPPIPNSPSPNLNLTLNHKSIKSQASASTTPILSPLKLTCMYCTRDSFTSMQQLQLHVHTMHQAILSGENLMPSPGQTAELSNHQKIDRNREVIFYAKKFPDDRNSLQEKDLYESSLTCGQCTMKFASPNLLREHLISIHRVDGLGSLMICPLCGIPCSSAAAYAEHYVLQHCEDRRLSEAREYGDPKLNGSYDIKQTRAKIAKDFEPADLTNKHLKPNENYSAGTLLCGQCGAALKDFESFREHLARHLKADQKNETPRNQCPKCEANFSDREEMMVHLTKHFLGQVTKEYACNACKKLYPHPDLLQRHLLDSHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNVCSINNENSPGNAPVENMNFFRSEAEMANHVRTVHAPPSHVNESPLPRSPASTPGITNRCVFCGICCNSDLDLQLHMASHSTNLYRCPICREGFAVEFLLDRHIAQVHHSNHTRENGRIHRPSRSQEDVNSETNREQRTKRGRSPASSNNNSLNQRDNNKRPNYGTVQQCELCERGEFTNDAELQAHKKLAHTPSKVQGKSMSSLSMTCAYCGEVCRSRSELESHTRIQHATNEHGGRHKCNICDEVCPSGATLAEHKLQKHCKIQLSDVCIVCRGTLHSESQFFEHVQRHSLENVDPQQRLDSSLPHLPAPCVVCRQTLISDLEVRLHAKHHLRSNSGSQNSESPSPKHNKSSTHNCCLCLREFNAEEFVSLPSNHSTNSANSHLFVCKACYMRHSQGLPILNYGHPRSKSELWLKETQWENASREKWNGNYKIEEKTSDVGTNDVMRCEECNIKFEDSEEAEKHRIEEHKPLGTYTCIQCQVSFPTEAKIQEHVKKEHLESSGKESLEALRCHLCLFDANSPLQLQSHLIEHTFAGCTALSCYICQSLFTAPIGLQNHMLQQHGLGARPYDCNNCELKFFFRAELDQHVGVFHSARVPSPKDVKKIENGIQEHDIEIHEKITVKEEIHQINENDEITVDVNEKYENQETNTINMENIHSDKVYTEQINDSES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00980419;
90% Identity: -
80% Identity: -