Lbou006660.1
Basic Information
- Insect
- Leptopilina boulardi
- Gene Symbol
- spop
- Assembly
- GCA_011634795.1
- Location
- PHTE01000229.1:339231-344768[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.3e-23 3.4e-21 75.9 2.1 2 109 166 268 165 269 0.91 2 6 2.1e-26 5.5e-24 84.9 4.0 7 109 367 467 361 468 0.93 3 6 7.9 2e+03 -0.7 0.0 79 107 469 497 465 500 0.87 4 6 6.1e-21 1.6e-18 67.3 1.1 4 109 658 757 655 758 0.92 5 6 9.7e-28 2.5e-25 89.2 0.3 3 108 852 953 850 955 0.94 6 6 0.45 1.2e+02 3.4 0.0 78 106 955 983 952 987 0.89
Sequence Information
- Coding Sequence
- ATGGAATTTTCCAAAGTAGCAGACTCATGTTTTACATGGAcaataaatgattttgaaaaatcttgcaCTGAttcgttaaaaaagaaaaatctttgttCATCAAGTTTTACAACTTCAATAGAACCAAGTAGACAGTGGAATTTAGTTCTTTCTCTAACGGAAAAATTTGGCGAACATTGTGAACgttgtaaattaataagatCAAAAAGATATCCACCCGAGCCTTGTAATGTAAAACTTgacagaaaaattatcaatttagaaTTGATTTGtgacaaaattattgaaaatccagcagatataaaagttaatatctcaataatgaaaaatcttgaaaaaatttacaccaGAAGTTTTATAACATCTGGAGATGAGACAAATTTTGGTTTCgataatttcattgattttgatgaattaatgaaaataattaatgacagtcaattagaaatatttgttgaaatgtttttaaaagctGATgagaaaaatagcgattttaaAGTGTTTAtgaattccaaatttttgagtgatattcaaattttaatacacgATCAAAAGTTCTACGCTCACAAGgtaATGTTAGCAGCAAAAAGTCCATATTTCAacgatttatttgaaaaagataaagaaaTGAAGAAAGTAAATAGTCTTGATTGTATAAAACTAGACGcctttattgaaattttaaattacatttattctgataatattgaaaattggtCGTTGTCTTGCGATATTTTATTGGGGgcaaatcttttaaaaatggataatCTTAAATCAGAATGTGAGGAATATTTAAGAAACAATATAACAATGGAATGCGTAAGTCCAGTTTTGATGTTGGCTGTTGCGTgtgatacaaaatttttattgaaacactgtctttattatattatgaaaaatgtgaataatCTTGCTAAATCGGATAATTTTCAATGCTTAAAAACTGAACCActtataatattgaatattctcaaacaattatttcaacacACAGCTAATGGAGATTTATCAATTACTGATAATATAAGActctcatttaaaaatagtgaatCACAAATTAATTGTCAAATGTTAAAAGATTATGAACCATTTTTATATAGCGATATTTTAAGTGATATTACAATTAAAgttgaggaaaaaatttttcaatgtcatAAATTGGTTCTTGCTGCAAAAAGTTCAGTATTACGTAGAATGCTAATGTGTAATATGAAAGAGgctattgataattttattcaaattaaagatATGAAAGCTCAAGTATTTCAAGAAGTACTcagaTACATGTACACTGGAAGAGTGGAAAAACTACAAGATTATGcacttgatattttaaaagctgCTGATCAATATGATttagaacatttaaaaaaattgtgccaaGAATTTTTGGTTGACCATTTAACGCACGATAATGTCGTTGACATTGTGAAAATTGCCAACACATATAATGCATCGTTCCTAAGAAAGGgttgcatttattttattatggaattttcaaaagtagCCGATACATGTTTCACATGGACAATAAATGATTTTggagaattaaatattgattctttgccagaaaaaaattttacttcgaCAAATTTCACAACATTAAAGGATCCAAATAGAAATTGGCAATTACTTCtctctataaataaattaaatcaaatttttcgttCAATCTCAAAATGTGATAAttctaattgtttaaaaaaaacattaacaaaaaagattattaatttgaaaattttttgcaatgaaaCTACCACTAATCCAGAGGATATGaaagttaatatttcaatgaaaaacaattttgaaaaattaactagAAGTTTCATTATTTCGGGAAACGAAAAGGAattcttttatgaaaatattatcgaTTGTGAGacaatgttaaaaatgattcaaGACGGGAAACTAGAAATATTTgttgaaatgttttttcgaattgagaagaaaataaaatttttcgaaataatcaGAAATTCCGAATTTTTGAGtgatatacaaattttaataatgggTCGAAAATTTTATGCGCACAAGgCTATTTTAGCTTCGAGATGTCCATTCTTCtatcaattatttcaacaagAGAAAGAAATTAACGAATTTAAGAATCTTGAAATAATGCCAAAAATCTTTACGgaaattttaaagtacatTTACTCCGACTATTTGGAAAAATGGTATCTCTCGTGTGATATCTTAATTGCTGCAACTATTCTACAAAtggaagatttaaaattggaatgtgaaaattatttgagaaataatttaacattcgATTGTATCAATACAGTTTTGATAATATCTGTCGAGTGTAATACAAAATATCTACTAAATCACTGTCTGCAGtatgcattaaaaaatataaatgcacTACcaggattaaaaaattttcactgccTCAAAACAAAACCACTTGTGGTATTGCGTATTTTGCAAGAAATTCTCGATCAATTTcataatggaaaaataacaattgtcgacaatataaatttatccTACACAAAGGTTGCGTCAAATAAAAGTagctatttattaaaagaatacgagtcatttttggataataaaaatttaagtgatattacaattcgagttggagataaaaattttcacagccataaaattattttagctGCTAAAAGTCCAGTTTTACGTGaattaattgtgaaaaatataaaggaaaataatttaatggaatttaatgatattaaaGCAGAAATTTTTGAGCAGGTATTAAgatatatgtatactgGAAAAGTGAACAATTTACAAGAGTACggaattgatattttaaaagccgCAAATCAGTATAAATTGGAgcacttgaaaaatatatgtgaGGAATTTCTTGTGGGAAATTTGACACACGACAATGTGGTGGATACATTGAAAATTGCTGACGCATGTAATGCTCCGTTTCTCGTAAAACATTGTAGTCATTACATTATGAAtccttcaaatatttttattgctataacttattaa
- Protein Sequence
- MEFSKVADSCFTWTINDFEKSCTDSLKKKNLCSSSFTTSIEPSRQWNLVLSLTEKFGEHCERCKLIRSKRYPPEPCNVKLDRKIINLELICDKIIENPADIKVNISIMKNLEKIYTRSFITSGDETNFGFDNFIDFDELMKIINDSQLEIFVEMFLKADEKNSDFKVFMNSKFLSDIQILIHDQKFYAHKVMLAAKSPYFNDLFEKDKEMKKVNSLDCIKLDAFIEILNYIYSDNIENWSLSCDILLGANLLKMDNLKSECEEYLRNNITMECVSPVLMLAVACDTKFLLKHCLYYIMKNVNNLAKSDNFQCLKTEPLIILNILKQLFQHTANGDLSITDNIRLSFKNSESQINCQMLKDYEPFLYSDILSDITIKVEEKIFQCHKLVLAAKSSVLRRMLMCNMKEAIDNFIQIKDMKAQVFQEVLRYMYTGRVEKLQDYALDILKAADQYDLEHLKKLCQEFLVDHLTHDNVVDIVKIANTYNASFLRKGCIYFIMEFSKVADTCFTWTINDFGELNIDSLPEKNFTSTNFTTLKDPNRNWQLLLSINKLNQIFRSISKCDNSNCLKKTLTKKIINLKIFCNETTTNPEDMKVNISMKNNFEKLTRSFIISGNEKEFFYENIIDCETMLKMIQDGKLEIFVEMFFRIEKKIKFFEIIRNSEFLSDIQILIMGRKFYAHKAILASRCPFFYQLFQQEKEINEFKNLEIMPKIFTEILKYIYSDYLEKWYLSCDILIAATILQMEDLKLECENYLRNNLTFDCINTVLIISVECNTKYLLNHCLQYALKNINALPGLKNFHCLKTKPLVVLRILQEILDQFHNGKITIVDNINLSYTKVASNKSSYLLKEYESFLDNKNLSDITIRVGDKNFHSHKIILAAKSPVLRELIVKNIKENNLMEFNDIKAEIFEQVLRYMYTGKVNNLQEYGIDILKAANQYKLEHLKNICEEFLVGNLTHDNVVDTLKIADACNAPFLVKHCSHYIMNPSNIFIAITY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -