Basic Information

Insect: Leptophobia aripa
Gene Symbol: RREB1
Assembly: GCA_951799465.1
Location: OX637280.1:1261878-1274017[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.14 8.6 7.1 1.0 1 23 86 109 86 109 0.96

2 11 0.018 1.1 9.9 0.1 1 23 289 311 289 311 0.97

3 11 0.00097 0.061 13.9 0.4 1 23 320 342 320 342 0.99

4 11 0.0006 0.038 14.6 2.0 1 23 348 371 348 371 0.97

5 11 0.0024 0.15 12.6 1.6 1 23 714 737 714 737 0.96

6 11 0.0002 0.013 16.0 1.3 2 23 920 941 919 941 0.97

7 11 0.021 1.3 9.7 5.3 1 23 947 970 947 970 0.97

8 11 0.051 3.2 8.5 0.9 1 23 1000 1024 1000 1024 0.94

9 11 0.06 3.8 8.2 0.4 1 23 1045 1068 1045 1068 0.94

10 11 0.0015 0.093 13.3 0.2 2 23 1108 1129 1107 1129 0.96

11 11 0.023 1.4 9.6 5.3 1 23 1135 1157 1135 1157 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.14	8.6	7.1	1.0	1	23	86	109	86	109	0.96
2	11	0.018	1.1	9.9	0.1	1	23	289	311	289	311	0.97
3	11	0.00097	0.061	13.9	0.4	1	23	320	342	320	342	0.99
4	11	0.0006	0.038	14.6	2.0	1	23	348	371	348	371	0.97
5	11	0.0024	0.15	12.6	1.6	1	23	714	737	714	737	0.96
6	11	0.0002	0.013	16.0	1.3	2	23	920	941	919	941	0.97
7	11	0.021	1.3	9.7	5.3	1	23	947	970	947	970	0.97
8	11	0.051	3.2	8.5	0.9	1	23	1000	1024	1000	1024	0.94
9	11	0.06	3.8	8.2	0.4	1	23	1045	1068	1045	1068	0.94
10	11	0.0015	0.093	13.3	0.2	2	23	1108	1129	1107	1129	0.96
11	11	0.023	1.4	9.6	5.3	1	23	1135	1157	1135	1157	0.97

Sequence Information

Coding Sequence: ATGCAGGGGGCGGCCAGCGCGCCTGCGCCCTCCGCGGCCGAGCCTCCAGCTTCGCAACAAATCAAAGCTGAAGTTATCAGTGAAGCAAAAATTGATGCTGATGACATGAAGATCGAAACGCGGGCAACCAGAACCATGAGTATAGACAGTGATAATCGCTCCGATAGAAGCGATGAGGATGATTGCAGGAGGGCTCGCAAGAGGGCAGCGTCGTCATCACCATCACCCATGCCCCTCGACAAGAGGACAGCGCGCTTTGAATGCTCCAAATGCGTACAACGCTTTGACTCCCTGAACTCATTTGATATCCACCGATTTACCGCCCACGGTGACGAAACCAAGACAAACTATGACGACTACTCCTTGGATTTTACAAGTAAAAAGTTCTCCGATATTAATAGAAACATTGGTGAACGCAACCTGTACAGATGTGAATTTTGCTCGAGAGATTTTCCTTGTTTACAAGTGTTGGACATACACCGAAAGACATGCCTGTCTACCAGAATTCCAAGTCCAGAGAGAGACCGCCGAGAGGACTTTTTCGCTAAGTTAGATCTAAGAAATAGATCCTTTGGTATTCCAGGAACGTTAACGCCGCCTATGGAGAGATTTCCTCCAAAATTCGAAGACGCACACTTAGCCAATGGCATAAGACATATTGATGCTGCAAGAGACTTGGCTGATAtacaatctatattaaatgtcACGTCTGCTAGTAGTCTTTTAGAAAGATTAACAGGAACAAGAGTGGCATTAGAGACCTCTGTACTTACTCCCCCAGATACTGCCTCAAAAGATAGGGAATCGGAAGAAACGCAAGATAATTTTGCCGCTGAATTCAGGCGTATGAAACTAAGAGGAGAGTTTCCTTGCCGTTTATGTCCAGCTAAGTTTCCAAATCTGAGAGCCTTGAAGGGTCACAACAGAGTTCACTTAAGCGGAACTGGTCCTGGGCCATATCAGTGTAACATGTGTCCTCATGCATCTCTCGATAAAGCAGCCTTGGTTCGTCACATGCGGACGCATAACGGTGACAGACCTTACGAATGTGCCGTGTGCAACTATGCCTTTACAACTAAAGCAAATTGCGAAAGACACTTGAGGAATCGTCATGCTAAAGTTACACGCGAAGATGTTAAGCGATCTATTATATACCACCCTTCAGAAGATCCAAACAATGATGAAGTCAATTCAAAACTTGCACGCGAAGAGGTGAAAAGATCTCTCGCATTCCATACCCCTGACATTGAAAGGCGCAATGACTCCTCAGGTCGTGATACTCCTTTGACTCACTACTCTCCAACGTTTGTCACTGACAGGCATCCAGTTACTGCGTTAGTAAAGTGTCTGCCCGAAACTCCGACACCTAGAGAATGCGAACAAACATTGCCAAGAATTAAAGTGAAAGGCATCGGTCAACTGACACAAATACCTGAATTCAGAACACCTGATGTTACATTTAAGGCAAACGAAATACCGTCGGACGCTTACAATGAAGAAATTCCAGTTGACTTGAGTACAAGCGACAACAACAGTTGTGATGTTCTAGATCTAAGCAAGAAAAAACGAGACGCTGATGACGAGGAGCCCATAGTTCAACAGCGACCAACGTTTGATTCTACGGCTACAGTGGCGGCCTCTGCTGCTGCCTTTGAGAAGACGAGGTTCCTTCTAGCACAGCAAAGACTCTTTGAAACTGCTCTTCCGAAGTTAGATCCAGCTTATTATGCCTCGCAGCTCTCCCAACTTTATGCTGGTGCAGTACCGACCTTACCGGGACTACCTTTGCCACCGTCATTCCCTTTAAACCCTTACTTTCTTCAATCTTCTATATTTCCTAACCCGACTGATTCGCAAGAACTTGCCGAAATAAAACAGCGTATTCAAAAAGAGATAATTCGTGGCCTAAGTATGTCAGGCGGAAGGCTCGTGTCTACAGACCAAGAACTCCAACCTAAACAAGAACCAGAGGAAGAGGAACAGAAACCTTTGCAATTGTCCACAACGCCTACACCTCCCCCACACCCTGAATCTCCGCATCATAATACCGTGTCTCAAAACGATCCTGTTAAAATGGTTATAAAAAATGGTATTCTAATGCCTAAGCAAAAACAACGTAGATACCGCACTGAACGACCATTTTCATGCTCACAGTGCTCTGCTCGTTTCACATTGCGCTCAAACATGGAACGTCACGTCAAACAACAGCATCCGCAACACTGGAGTGTTAGAAGACCAACGCCGAGGGCCCCACCACCGTATCCTGGCTCTGAAAACTTAGCTGATCGCGTGAAGTATGCCCTTCTAGCAAGACACCTGGAAAGGCCAACACAATTGGACCGCTCTCCCATAAGAAGAGATTCCGATGAAGTCGCAGACAACGAAGAAGATGAGGAGGACGCTTTAGTTATTGACGAAGAACCGGATGATAAGTTAGATGAACGTTCTGCCGCGCATCGTGCTGCAGCAGAAATACTAATGGCGACTCGACAACAAGAACTCAACAAAGATTTCGATCTAAAAATAGCTGGAAACCTTATCAACAAACCAATACCTTCAGAGAAAACAGACGATCCCCCATCAAGTCAAGATGTCGCAATAGTTCCAACGCGTTCTGATGAAGAGGAGGACGAAGAAGGTCTGGTTGCTTCTACCAGTGAAGGCAATAACTCTGGAAGCGATGAAAACAAATCGGAGTCGGACACAAACCAACCGCCAAAGAAGAAATCAGCATACAGCCTCGCCCCGAACCGTGTCTCCTGTCCCTACTGCCACCGGAAATTCCCCTGGTCCTCTTCCCTCCGTCGACATGTCCTCACCCATACCGGCCAAAAGCCATTTAAATGTCCTCACTGTCCTCTACTCTTCACAACCAAATCCAACTGCGATCGGCACCTACTACGAAAACACGGAGGCTCTGCTAAAGCGATTTTGGCCGAACCAATCCCCGACACACTCCCAACGCCGAATGACACGAGAGCAGTACCCGAAAGACCTTTCAAATGCGCCACCTGTCCAGCTAGCACCTTCTCCTCAATGGAAACGTTGAAAAAGCATATGTCTTCGCGTCATGGTGGTGGTGAATCGCCACCATCCCCATTGCCGGAAGAAGAATCGGATATTGGGCTTGTTTTCAAATGCCACCTCTGTGAGGCCGCGTTCAGTGATCGGAATGGGGCGTTGGGACATCTATCAACGAACCACACGGTGGAGTATGAGCAGTTAGTCACGAAGGGTGCTCTGGATGTGGTCAGCGATAGAAGCGAAAGCGCCGACGATGATGATAGGGGAAAATTTCCAGACCATGCCAATAGAAAGGTTGTTTGCGCATTCTGCGTGCGTCGTTTTTGGTCAGCTGAAGATTTGCGCAGACACATGCGCACACATTCCGGTGAAAGGCCGTTCGCATGCGACCTCTGCAGGCGTCGGTTCACCCTCAAGCACAGCATGCTGCGTCATCGCAAGAAGCATCGAGAGGAGGCCACAGATGATGAAGAGGCTTCCCCACCGGACACGCCCATAGATCACAAtggCTACCGTTACCAAGACGAGGACGGCTCCGGAAACGAGATCCCCAACAACATAAACAACAACAATTCTCCACCCTCCCGTCCCTACgagaagaaaataaaactgGACATGTCCCGGAAGTACTCCTCCGAGGAGAACGAGGGCGAAAACGGAAGTGACCTCATCGGTAAGCTTTTGGGCATTCCGGACAAGACCATCATCAACAAACTTCTCTCATCGGCCGACGAAGCCGCGAAGTTCTTGGGAGTCAATAAATGA
Protein Sequence: MQGAASAPAPSAAEPPASQQIKAEVISEAKIDADDMKIETRATRTMSIDSDNRSDRSDEDDCRRARKRAASSSPSPMPLDKRTARFECSKCVQRFDSLNSFDIHRFTAHGDETKTNYDDYSLDFTSKKFSDINRNIGERNLYRCEFCSRDFPCLQVLDIHRKTCLSTRIPSPERDRREDFFAKLDLRNRSFGIPGTLTPPMERFPPKFEDAHLANGIRHIDAARDLADIQSILNVTSASSLLERLTGTRVALETSVLTPPDTASKDRESEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLAREEVKRSLAFHTPDIERRNDSSGRDTPLTHYSPTFVTDRHPVTALVKCLPETPTPRECEQTLPRIKVKGIGQLTQIPEFRTPDVTFKANEIPSDAYNEEIPVDLSTSDNNSCDVLDLSKKKRDADDEEPIVQQRPTFDSTATVAASAAAFEKTRFLLAQQRLFETALPKLDPAYYASQLSQLYAGAVPTLPGLPLPPSFPLNPYFLQSSIFPNPTDSQELAEIKQRIQKEIIRGLSMSGGRLVSTDQELQPKQEPEEEEQKPLQLSTTPTPPPHPESPHHNTVSQNDPVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPTPRAPPPYPGSENLADRVKYALLARHLERPTQLDRSPIRRDSDEVADNEEDEEDALVIDEEPDDKLDERSAAHRAAAEILMATRQQELNKDFDLKIAGNLINKPIPSEKTDDPPSSQDVAIVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTNQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSAKAILAEPIPDTLPTPNDTRAVPERPFKCATCPASTFSSMETLKKHMSSRHGGGESPPSPLPEEESDIGLVFKCHLCEAAFSDRNGALGHLSTNHTVEYEQLVTKGALDVVSDRSESADDDDRGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEATDDEEASPPDTPIDHNGYRYQDEDGSGNEIPNNINNNNSPPSRPYEKKIKLDMSRKYSSEENEGENGSDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01202808;
90% Identity: iTF_01206910;
80% Identity: -