Labn001803.1
Basic Information
- Insect
- Leptomastidea abnormis
- Gene Symbol
- bab1
- Assembly
- GCA_030522805.1
- Location
- JAPYZE010000236.1:76971-80770[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 3.9e-14 53.4 0.0 1 43 50 93 50 95 0.95 2 2 2 4.6e+03 -1.3 0.6 6 15 172 181 168 183 0.87
Sequence Information
- Coding Sequence
- ATGCTGTTTTCCCTGGCGTTTCGGGGGGCTGTTTCAGCAGATAGCTATCAGTATCAATTGCAGTCGATGTGGCAAAAGTGTTGGAACACTAATCAAAGTCTGGTACACAATCTGCGCTTTCGGGAGCGGGGCCCTTTGAAGTCATGGCGACCGGAAACGATGGCGGAAGCGATATTTAGCGTACTCAAGGAGGGCCTCTCCCTCAGCCAGGCTGCAAGGAAATACGATATTCCGTATCCAACATTCGTACTTTATGCGAACCGAGTTCACAACATGCTCGGACCGAGCGCCGACAGTGGAGCGGATCTGCGGCCGAAGGGCAGGGGCAGACCGCAGAGGATCCTACTCGGAGTCTGGCCGGACGAGCACATCCGCGGCGTGATTCGCGCGGTAGTCTTCCGCGATGGTCAGTCGCCCCACATGGTCAAAGAGGAGCCTGCTGCCATTTACCCGAGTCTGGCGAATTACGGCGCTTGCAACGGGCCCGAGGGAGCGGTTAGCCCCAGTGCAGCCGCAGCCGCGGTTGCCGCCGTAGCTCAAGGACTTCGACATCAGATGTGCAGTATGGTAGCTGCAGCGCATTCCCAACAACACGACATGCTGGCGACGAATCTGTCGACGAGTTTGTCGTCGAGTCTCTCCTCAAACTTATCCTCGAATCTTCAGGCGGCGATGCAGCAGGCGtcccagcagcaacagcagcagcaacagcagcatcatcatcaccagcaacagcaacaacaacagcagcagcaacaacagcagcagcatcaccagcaacagcagcaacatcacCATCAGTCGCATCACCACCACCAGCcgcaccatcaccaccatcatcaccaccaccacaacaaTAGTGGGGCTGGGCCGGGGATGGGTGGTATCGGAGGGCCCAGCGGCATACCCTCCGCCCACAGTCTGCTCGCGGCCGTGGGTCTGGGTGGTCCCGGGCTGCTGGGGGCCGGGGGCGTGGGCAGCGGTGGCTCGGGCAGCAACCACGACAACCCGTCGCCTCTGAATCTCGGGCTCGGCAGTCCCGACACGGGCGGCCCGCCCGACAGCCCGATCGACTCGCCCCTGGCCAGCCCCCTGGGCTCGCTGATGGACCCGGGCGGCCACCTGGCCCCGAGCGTCGAGGTCGGGATCGGGGTCAGCGGGATGACCTACAAGCCGGCTCGCAGCTTCGTCAGTCCGCGGCCGGAGAATCTCTTCCAGGAGGACATAAGCGAGCTGGTGAAGAGCTCGCACGCGGCCCtcaaggagaaggagaagatcGCCGTCAAGCTCGAGCCGCTCGCTGACTCCCGGTGCGAATAG
- Protein Sequence
- MLFSLAFRGAVSADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADSGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGQSPHMVKEEPAAIYPSLANYGACNGPEGAVSPSAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMLATNLSTSLSSSLSSNLSSNLQAAMQQASQQQQQQQQQHHHHQQQQQQQQQQQQQQHHQQQQQHHHQSHHHHQPHHHHHHHHHHNNSGAGPGMGGIGGPSGIPSAHSLLAAVGLGGPGLLGAGGVGSGGSGSNHDNPSPLNLGLGSPDTGGPPDSPIDSPLASPLGSLMDPGGHLAPSVEVGIGVSGMTYKPARSFVSPRPENLFQEDISELVKSSHAALKEKEKIAVKLEPLADSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00073637;
- 90% Identity
- -
- 80% Identity
- -