Apse001532.1
Basic Information
- Insect
- Anagyrus pseudococci
- Gene Symbol
- bab1
- Assembly
- GCA_030522585.1
- Location
- JAPYYQ010000116.1:4545-8219[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-17 2.9e-14 53.4 0.0 1 43 28 71 28 73 0.95 2 2 2.6 3.4e+03 -1.2 0.6 6 15 150 159 146 161 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGTTGGAACACCAATCAAAGCCTCGTACACAATCTGCGCTTTCGGGAGCGGGGCCCTTTGAAGTCCTGGCGGCCGGAAACGATGGCGGAAGCGATTTTTAGCGTGCTCAAGGAGGGCCTCTCGCTCAGCCAAGCTGCAAGGAAATACGATATTCCATATCCGACTTTCGTACTTTATGCGAACCGAGTTCACAACATGCTCGGACCGAGCGCCGACAGCGGAGCGGATCTACGGCCAAAGGGTAGAGGTAGACCACAGAGGATTTTGCTCGGAGTCTGGCCGGACGAGCACATCCGCGGCGTAATTCGAGCGGTAGTCTTCCGCGATGGGCAGACGCCCCATATCGTCAAAGAGGAGCCTGCTGCCATTTACCCGAGTTTGGCGAATTACAGCGCCTGCAACGGGCCCGAGGGAGCGGTTAGCCCCagcgccgccgcagccgcggTTGCTGCCGTCGCTCAAGGACTTCGGCATCAGATGTGCAGTATGGTAGCTGCAGCGCACTCCCAACAGCACGATATGTTGGCAACGAATTTGTCGACGAGTCTCTCCTCGAACCTGTCCTCGAACCTTCAAGCGGCGATGCAACAGGCGtcccaacagcagcagcaacaacagcagcaacagcaacaacaacagcagcaacaacagcaacagcaacaacaacagcagcaacagcagcaacatcaccatcaccagcagcagcaacaacagcagcagcaacagcagcaccaccagcaacagcagcagcaacaccaccaccagcagtcgcatcaccaccaccaccagccacaccatcaccaccaccatcaccaccaccacaaCAACAGTGGAGGCAGCGCTCCCGGCCTCGGCTCGGTCGGCGGCCCCAGCGGCATACCCTCGGCCCACAGTCTGCTCGCGGCCGTGGGCCTCAGCGGGCCCGGACTCCTGGGCatcggcggcgtcggcagcaGCGGCCCGGGCAGCAACCACGACAACCCCTCGCCGCTGAACCTCGGGCTGGGCAGCCCCGACACCGGCGGCCCGCCCGACAGCCCGATCGACTCGCCCCTGGCCAGTCCCCTCGGCTCGCTGATGGACCCGAGCCACCTGGCCCCGAGCGTCGAGGTCGGCATCGGCGTCAGCGGCATGACCTACAAGCCCGCCCGCAGCTTCGTCAGCCCGCGCCCGGAGAATCTCTTCCAGGAGGACATAAGCGAGCTGGTCAAGAGCTCGCACGCGGCCCtcaaggagaaggagaagatcGCCGTCAAGCTCGAGCCCCTGACCGACTCGCGGTGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADSGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGQTPHIVKEEPAAIYPSLANYSACNGPEGAVSPSAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMLATNLSTSLSSNLSSNLQAAMQQASQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHQQQQQQQQQQQHHQQQQQQHHHQQSHHHHHQPHHHHHHHHHHNNSGGSAPGLGSVGGPSGIPSAHSLLAAVGLSGPGLLGIGGVGSSGPGSNHDNPSPLNLGLGSPDTGGPPDSPIDSPLASPLGSLMDPSHLAPSVEVGIGVSGMTYKPARSFVSPRPENLFQEDISELVKSSHAALKEKEKIAVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00877768;
- 90% Identity
- -
- 80% Identity
- -