Labn040489.1
Basic Information
- Insect
- Leptomastidea abnormis
- Gene Symbol
- dl_4
- Assembly
- GCA_030522805.1
- Location
- JAPYZE010097764.1:1-628[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.62 4.7e+03 -1.3 0.8 120 120 33 33 9 61 0.48 2 2 5.7e-28 4.3e-24 86.7 0.3 1 94 100 183 100 183 0.97
Sequence Information
- Coding Sequence
- ATCGAGGCGTCGGATCCAAGCTTTGCTGAGCAACAGCACCAACAGCAGCACCAGCATCAACAGCAACCTCAGCCACATCaacaactgcagcagcagcaaccacagCCACATcaattgcagcagcagcagcaaccccaACAACATCATCGCCCGGAAGTTGAGATGATCGGAATGGCGTTCGGTCCTATCGGAGCTAACGGTGGAGGTGGTAACGGTGGTGGCAATCGGCTACACGAGCTAAGGCCACCCACAGCATCTACCTCCTCGGCTCAAATCCACAACGGCCCGGTGCCCTACGTCGAGATAGTCGAGCAGCCCGCGAGCAAGGCCTTACGCTTCATACCTGGCGTCAACAGTACCCCCGAAAATAGAACTTTTCCTGCGATTAGGattgtaGGGTATAAGGGTAGAGCGATAGTCGTTGTGTCGTGCGTAACAAAGGAAATGCCTCATCGACCCCATCCGCATAATCTTGTAGGCAGAGAAGTTTGCAAGAAAGGAGTTTGCACGCTTGAAGTTGCATCCGACAATATGATTGTGACGTTCGATA
- Protein Sequence
- IEASDPSFAEQQHQQQHQHQQQPQPHQQLQQQQPQPHQLQQQQQPQQHHRPEVEMIGMAFGPIGANGGGGNGGGNRLHELRPPTASTSSAQIHNGPVPYVEIVEQPASKALRFIPGVNSTPENRTFPAIRIVGYKGRAIVVVSCVTKEMPHRPHPHNLVGREVCKKGVCTLEVASDNMIVTFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -