Lcyl008508.1
Basic Information
- Insect
- Leptogaster cylindrica
- Gene Symbol
- Git
- Assembly
- GCA_963082835.1
- Location
- OY720106.1:4504140-4507698[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00017 1.6 9.6 1.4 15 43 426 461 424 472 0.67 2 2 4.6e-06 0.045 14.6 0.0 10 55 582 627 580 629 0.88
Sequence Information
- Coding Sequence
- ATGTGTTTTGCAAATAGAGACAGATTATTTACAAGAATGTCTCGAGTGAAATCTCGAACACAATCCGAAATATGCGGGGATTGTGGTGCATCCGATCCATCTTGGGCATCAATCAATCGTGGTATTTTACTATGTTCGGATTGTTGCTCGGTTCATCGGAGTCTCGGTCGACACATTTCTCAGGTGAAATCTCTTCGACAAGGCTCTTGGAGTCCAACTGTACTGAATTTGGTGAACTCGTTGAATTCTCACGGAGCAAATAGTGTTTGGGAACATTGCCTCCTCGATCCTATTGCAGGAAAGCACTTGCGGCGCAAGCCAAATCCAAAAGACTCCTTGCATCCGGTTAAGTCTGAATTTATCAAGGCAAAACATGTTAATTTAGCCTTTGTCCTCAAGCCAAATATACAAGATGATGGAGTCAACAATTTGGAGACTGAACTAAGCAAGCAACTTCATGCAAGTGTAAGAACAAGTAATTTAGAAACATCTTTAAGGCTCATTGTGCAAGGGGCTGACCCGAACTTTTTCCATGAGgaaaaGAAGTCTACACCTTTACACGTAGCGGCTAAGTTCGGGCAAATCTCACAGATAGAGCTCCTGATTGTGTATGGAGCCGATATAAATGTGGTTGATGGCGACGGTAACACTCCCATTGAAGTTGCAAAGAATAACAATTACAGTTCGATCGCTGAGAGGCTCGTCGAAGCCATGTACGAAGTAACGGATAGAATAACTGTGTTTTTAAGTGGAAAGAAACCAGATCACGGGtttggCAATCATTTGGTCATTCCTGACCAAAACAAGTTCGATATCAGTGAACAATTCAAGATAGCTCGCGGAAAATTACAGTTGGTgccaaataaaatgtttgaagaATTGCTAATGGATTTGTATGATGAAGTTGATCGGCGTGAGAACGAAGCTAtttggGCAACAAGCTCTCTCAACCCTGAAAGCGGTGCAGTTCCCTTTCTTCCTGCCAATCCATATTTAAGTGCAACACGAAATCAAgGACGACAAAAACTAGCGCGATTTAGTCCCATTGAGTTCTCGGGATTTCTAACAGACGTTTTAATAGACGCACGTCGGAGGCAGAACATGGCTAATCTCAGACCGATTGAACCTCCAGCTTTAAGCAGCTTAAAACAAAGGGAATCGAATTTGTCCGATGATGAGCCTCTATACGATGCAGTTGCTTCTGACGATGATTATGCTGCTCTAACTCCCATAGTACAACAGGCACTCGCAAATCAATCATTTGGAAATGATGTCGAGGTGGAAACATTACGGAAACAATTGATGGAATACATGTctgaaataaatcaattaaaatcagTTGTTCAGCAATTATCAACAGAAAACTCCGAATTAAAGTCAAAGTTTGCTGATACTAGCATTTACGATATGCCACTtCGCATTGATCTGAATGGAACTAAAACGGAAACAGAGCCAGTATTAGATGGCAGCAATCAATTGCCTTCTAAGAGGCCTGCAAGTCTGTATGAACCTAGAAAGGAGAAAGGTGGCGAATTTCGAACAACTACGAGTATGTATCAAATGGCAGCAGAAAAGTCAATTGAATTTCGGCAGCCTCTAAAGGAAGAAGTTAAATACAGGACCGACTTGGTCACTAGACGGTTAAAGGAACTATGTTTTGAGATGAAAGAATTAAACAATAAGGAAGCATTTGTTCCCTGCGCCGAGCGTATACGTGTTGCTGTTGCAGAACTAATTGCTATTTTTCCTACAcaaAATAATGTAGAAGTGATCAAAAGTGCCATTAAGCAACTAAACTTGTACACAGGATTGATTCAACGGGAATGTGAGAACTTGCAAAAGTCCCTTGCCAACGACGATGCTGCATTTACGAATTCATTTATGCAGGAAGTTCGCGATTGCGCTTTTCACATAGCAAATGCAACAAAAACTCTTGTAGTCCAATTTCCATGA
- Protein Sequence
- MCFANRDRLFTRMSRVKSRTQSEICGDCGASDPSWASINRGILLCSDCCSVHRSLGRHISQVKSLRQGSWSPTVLNLVNSLNSHGANSVWEHCLLDPIAGKHLRRKPNPKDSLHPVKSEFIKAKHVNLAFVLKPNIQDDGVNNLETELSKQLHASVRTSNLETSLRLIVQGADPNFFHEEKKSTPLHVAAKFGQISQIELLIVYGADINVVDGDGNTPIEVAKNNNYSSIAERLVEAMYEVTDRITVFLSGKKPDHGFGNHLVIPDQNKFDISEQFKIARGKLQLVPNKMFEELLMDLYDEVDRRENEAIWATSSLNPESGAVPFLPANPYLSATRNQGRQKLARFSPIEFSGFLTDVLIDARRRQNMANLRPIEPPALSSLKQRESNLSDDEPLYDAVASDDDYAALTPIVQQALANQSFGNDVEVETLRKQLMEYMSEINQLKSVVQQLSTENSELKSKFADTSIYDMPLRIDLNGTKTETEPVLDGSNQLPSKRPASLYEPRKEKGGEFRTTTSMYQMAAEKSIEFRQPLKEEVKYRTDLVTRRLKELCFEMKELNNKEAFVPCAERIRVAVAELIAIFPTQNNVEVIKSAIKQLNLYTGLIQRECENLQKSLANDDAAFTNSFMQEVRDCAFHIANATKTLVVQFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -