Basic Information

Insect: Leptidea sinapis
Gene Symbol: nfxl1
Assembly: GCA_905404315.1
Location: FR990166.1:10875842-10878319[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1 4.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81

2 20 0.0053 2.1e+02 3.2 0.3 4 10 169 175 168 176 0.97

3 20 9.8e-07 0.04 15.1 18.4 3 19 186 202 185 202 0.95

4 20 0.34 1.4e+04 -2.6 1.0 6 10 227 231 226 231 0.85

5 20 2.4e-07 0.0099 17.0 13.2 3 18 239 254 237 255 0.91

6 20 0.84 3.4e+04 -3.9 1.4 6 10 280 284 279 284 0.83

7 20 3.7e-08 0.0015 19.6 12.5 1 19 290 308 290 308 0.99

8 20 1.9e-05 0.78 11.0 17.6 3 19 345 361 336 361 0.86

9 20 1e-06 0.041 15.0 17.0 1 18 395 412 395 413 0.97

10 20 5e-11 2e-06 28.8 12.6 1 19 422 440 422 440 0.99

11 20 0.55 2.2e+04 -3.3 0.4 5 10 468 473 468 473 0.91

12 20 4e-05 1.6 9.9 5.8 9 19 488 498 486 498 0.90

13 20 0.0028 1.2e+02 4.0 7.8 3 12 509 518 508 518 0.90

14 20 0.3 1.2e+04 -2.4 4.1 14 18 547 551 547 552 0.85

15 20 0.14 5.9e+03 -1.4 0.1 8 12 568 572 567 572 0.80

16 20 1 4.1e+04 -6.7 6.2 2 10 574 582 574 582 0.90

17 20 2.7e-06 0.11 13.7 4.8 1 11 588 598 588 599 0.97

18 20 0.36 1.5e+04 -2.7 1.4 15 18 613 616 612 617 0.82

19 20 0.0018 71 4.7 16.6 4 18 630 645 628 646 0.88

20 20 3.7e-06 0.15 13.2 5.4 1 16 687 701 687 704 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1	4.1e+04	-7.8	5.6	15	19	134	138	133	138	0.81
2	20	0.0053	2.1e+02	3.2	0.3	4	10	169	175	168	176	0.97
3	20	9.8e-07	0.04	15.1	18.4	3	19	186	202	185	202	0.95
4	20	0.34	1.4e+04	-2.6	1.0	6	10	227	231	226	231	0.85
5	20	2.4e-07	0.0099	17.0	13.2	3	18	239	254	237	255	0.91
6	20	0.84	3.4e+04	-3.9	1.4	6	10	280	284	279	284	0.83
7	20	3.7e-08	0.0015	19.6	12.5	1	19	290	308	290	308	0.99
8	20	1.9e-05	0.78	11.0	17.6	3	19	345	361	336	361	0.86
9	20	1e-06	0.041	15.0	17.0	1	18	395	412	395	413	0.97
10	20	5e-11	2e-06	28.8	12.6	1	19	422	440	422	440	0.99
11	20	0.55	2.2e+04	-3.3	0.4	5	10	468	473	468	473	0.91
12	20	4e-05	1.6	9.9	5.8	9	19	488	498	486	498	0.90
13	20	0.0028	1.2e+02	4.0	7.8	3	12	509	518	508	518	0.90
14	20	0.3	1.2e+04	-2.4	4.1	14	18	547	551	547	552	0.85
15	20	0.14	5.9e+03	-1.4	0.1	8	12	568	572	567	572	0.80
16	20	1	4.1e+04	-6.7	6.2	2	10	574	582	574	582	0.90
17	20	2.7e-06	0.11	13.7	4.8	1	11	588	598	588	599	0.97
18	20	0.36	1.5e+04	-2.7	1.4	15	18	613	616	612	617	0.82
19	20	0.0018	71	4.7	16.6	4	18	630	645	628	646	0.88
20	20	3.7e-06	0.15	13.2	5.4	1	16	687	701	687	704	0.91

Sequence Information

Coding Sequence: ATGGCTCGAAGATATCGTGACGCTGCTGCTAAAATGCAGCAGAACGTCCAAAAACATTTAGAAAACATGAAAGAATTTTCTTCTTCAGAAGATGAAGAACCTTGCGACTCAAGTGTGTTGGAAGGAGTCTTCCAGAGTTATTGCCGAGGCGGTGGAGACAATCAAATGCTAAACAGAACGAAGAATCTTCTCGAAGAAGCGATTAGCGGTCGGTCGGTCACATGCTTGATATGCATTGGTTCTATTAAAAAAGTAGACGCGATATGGACGTGTACTCACTGCCATTCCTATTTTCATCTATCTTGTATTCAAAAGTGGTCCAAAGATAGCATAACTCTGCTTTCTCAGGAAACAACAGGACCAGTTGCAGTTTGTAAACCTAGAAAAGTAGAATGGTGTTGTCCTAAGTGTAGAAACGCATATAGCAAAGAAGAAATACCCACTAGGTACAGTTGTTTTTGTGGAAAAACAAATGATCCGACTTTCCACCCATGGCTGTTACCTCATACATGTGGTGAAGTATGTGGTAAGAAATTGTCAATAGGTGAGAATTGTCACCATAAATGTCTTTTGCTGTGTCATCCTGGACCATGCCCTCCTTGTCCTCAGACTGTAAATGGTTCCTGTTACTGTGGCAATGAAAGAAAGAAGGTGAGATGCAGTACATCTAAATGGTCATGTAACCAGCCATGTAGGAAGATGCTATTTTGTAGATCACATAAATGCGAAGTCAACTGTCATGATGGAGAATGTCCACCTTGTAACTATACAAGTCTTCAATTCTGTCAATGTGGCTCTGAAAAGTTGCAGCGTCCATGCAGTGAACCTATTTGGCAGTGTTCAAAACCATGCAACAAACCTTATGCTTGTGGAACTCATAAATGTGAGAAGATATGTCATTTAGGTGTTTGTGGAGACTGTCCTCAGTCTGGCTTGAGGTCATGCCCATGTGGGGCAAATAGAAGAATTGTTAAGTGTCCAGATACAATTGAAACTTGTGCTGGGACATGTGGTAAGAGACATGAGAACTGTGAACATAGTTGTCCAGAAAAATGTCATAAAGGATCATGTTCACCCTGCCAAGTGTTGATAGAAAAGAAATGTCTATGTTCAACTCACACAAGACTGTTGCCCTGCAGCAAAGAATTTAGATGTGACACAAAATGTAGAGAGACTAGATCTTGTGGTAAACATTCTTGTGCTCGTAAATGCTGCAATGGAACCTGTCCTCCCTGTGAGAAAACTTGTGATAAACCCCTGCAATGTGGGCGTCATAAATGTGCAGCAGTGTGCCACCGAGGGCCCTGCTACCCCTGTCCTAGAGATGCCAAAGTAACATGTAGATGTAAAGATACCTATATTACTGTACCTTGTGGTCGAGAGAGGTATGTAAAGCCTCCAAAATGTGATTCTATATgtcaaattaaatacaaatgtGGACATATctatgaaaataaacatttgtgTCATTTTGGTGAATGTCCACCTTGCAAGGCTATCTGTGATAAGCCATATCAGAGATGTGAGCACAAATGTAAAGCTGTGTGCCACAAGTATGTTTCAGTTGTTTTCAAACAAGTAGAAAAACCAGCAACTCCATGGGAAGTGCAACCACCAAAGACAAAAATAATGGCTCTACAGTGTCCCCCTTGCGAGACCCCAGTGCCAATCATATGCTTTGGTGAACATGAGACTGAGATGCAACCCTGCCATTCTGCTGGAAGACATTGTTGTGGCAGAGAGTGTGGAAGGAAATTAGCTTGTGGCAACCACAAATGTAGTCTGTTATGtcatttgtatagttatgaTCCTAACTACCCAAATGTGCCTTATTCATGCCGACCTTGTAACAGAGAGTGTTCAGTGCCCCGTCCAGATAATTGTTTACATAAATGTCCAAAAAAAGGCTGTCACCCTGGCACTTGCCCACCCTGTGAGATTTTGGAAAGAATAAAATGCTTTTGTGGTGTCACAGATTTGTATATTCACTGTAATGAACTATCTGTAGCAGTTGATGACCAACTGAGTTGTAAGCAGCAATGCCCTAAAAACCTTCAATGTGGACATAGATGCAAAAAAATCTGTCATAAAAGCTTGTGTGATAGTTAccaaatttgtattaaaaagaCTAAAGTTTATTGTCCTTGTGGAAATCTGAAAAAAGATGTTCCATGCAATCTTTTGCAGACCTCTGAGATGAAAATAATTTGCGATGAGTCTTGTGAAGCAAAAAAATTAGCCATTAAATTGGAAAAAGAATTGGAGGAGAAGAGACAAAAGGAGTTGGAACAAGAGAAAAATCGTAAGGAACTGGAGGAATATGAGTGGAAAATTAGTggcaaaaagaaaaaatataaggaGAAGAAAATTGTTGCCAACGAAGAGAACAGGAGCATGCTGCACAAATATTGGGTTCCTCTTGCAAGTGTGGCTGTGCTAATATCTACTGCACTTTATTTCATCTTGTTTACTATGTAG
Protein Sequence: MARRYRDAAAKMQQNVQKHLENMKEFSSSEDEEPCDSSVLEGVFQSYCRGGGDNQMLNRTKNLLEEAISGRSVTCLICIGSIKKVDAIWTCTHCHSYFHLSCIQKWSKDSITLLSQETTGPVAVCKPRKVEWCCPKCRNAYSKEEIPTRYSCFCGKTNDPTFHPWLLPHTCGEVCGKKLSIGENCHHKCLLLCHPGPCPPCPQTVNGSCYCGNERKKVRCSTSKWSCNQPCRKMLFCRSHKCEVNCHDGECPPCNYTSLQFCQCGSEKLQRPCSEPIWQCSKPCNKPYACGTHKCEKICHLGVCGDCPQSGLRSCPCGANRRIVKCPDTIETCAGTCGKRHENCEHSCPEKCHKGSCSPCQVLIEKKCLCSTHTRLLPCSKEFRCDTKCRETRSCGKHSCARKCCNGTCPPCEKTCDKPLQCGRHKCAAVCHRGPCYPCPRDAKVTCRCKDTYITVPCGRERYVKPPKCDSICQIKYKCGHIYENKHLCHFGECPPCKAICDKPYQRCEHKCKAVCHKYVSVVFKQVEKPATPWEVQPPKTKIMALQCPPCETPVPIICFGEHETEMQPCHSAGRHCCGRECGRKLACGNHKCSLLCHLYSYDPNYPNVPYSCRPCNRECSVPRPDNCLHKCPKKGCHPGTCPPCEILERIKCFCGVTDLYIHCNELSVAVDDQLSCKQQCPKNLQCGHRCKKICHKSLCDSYQICIKKTKVYCPCGNLKKDVPCNLLQTSEMKIICDESCEAKKLAIKLEKELEEKRQKELEQEKNRKELEEYEWKISGKKKKYKEKKIVANEENRSMLHKYWVPLASVAVLISTALYFILFTM*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00875841;
90% Identity: iTF_00875841; iTF_00874992;
80% Identity: -