Ljuv002735.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leptidea juvernica
Gene Symbol
nfxl1
Assembly
GCA_949711685.1
Location
CATIXL010000003.1:2109878-2112355[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 4 4.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.021 2.3e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 20 3.9e-06 0.044 15.1 18.4 3 19 186 202 185 202 0.95
4 20 1.3 1.5e+04 -2.6 1.0 6 10 227 231 226 231 0.85
5 20 4.5e-07 0.005 18.1 13.2 3 18 239 254 237 255 0.91
6 20 3.2 3.5e+04 -3.8 1.1 6 10 280 284 279 284 0.88
7 20 1.5e-07 0.0016 19.6 12.5 1 19 290 308 290 308 0.99
8 20 7.6e-05 0.85 11.0 17.6 3 19 345 361 336 361 0.86
9 20 4.1e-06 0.045 15.0 17.0 1 18 395 412 395 413 0.97
10 20 2e-10 2.2e-06 28.8 12.6 1 19 422 440 422 440 0.99
11 20 2.2 2.4e+04 -3.3 0.4 5 10 468 473 468 473 0.91
12 20 0.00016 1.8 9.9 5.8 9 19 488 498 486 498 0.90
13 20 0.011 1.3e+02 4.0 7.8 3 12 509 518 508 518 0.90
14 20 1.2 1.3e+04 -2.4 4.1 14 18 547 551 547 552 0.85
15 20 0.58 6.4e+03 -1.4 0.1 8 12 568 572 567 572 0.80
16 20 4 4.5e+04 -6.7 6.2 2 10 574 582 574 582 0.90
17 20 1.1e-05 0.12 13.7 4.8 1 11 588 598 588 599 0.97
18 20 1.5 1.6e+04 -2.7 1.4 15 18 613 616 612 617 0.82
19 20 0.0017 19 6.7 16.0 4 18 630 645 628 646 0.88
20 20 1.5e-05 0.17 13.2 5.4 1 16 687 701 687 704 0.91

Sequence Information

Coding Sequence
ATGGCTCGAAGATATCGTGACGCTGCTGCTAAAATGCAGCAGAACGTCCAAAAACATTTAGACAACATGAAAGAATTTTCTTCTTCAGAAGATGAAGAACCTTGCGACTCAAGTGTGTTGGAAGGAGTCTTCCAGAGTTATTGCCGAGGCGGTGGAGACAATCAAATGCTAAACAGAACGAAGAATCTTCTCGAAGAAGCGATTAGCGGTCGGTCGGTCACATGCTTGATATGCATTGGTTCTATTAAAAAAGTAGACGCGATATGGACGTGTACTCACTGCCATTCCTATTTTCATCTATCTTGTATTCAAAAGTGGTCCAAAGATAGCATAACTCTGCTTTCTCAGGAAACAACAGGACCAGTTGCAGTTTGTAAACCTAGAAAAGTAGAATGGTGTTGTCCTAAGTGTAGAAACGCATATAGCAAAGAAGAAATACCCACTAGGTACAGTTGTTTTTGTGGAAAAACAAATGATCCGACTTTCCACCCATGGCTGTTACCTCATACATGTGGTGAAGTATGTGGTAAGAAATTGTCAATAGGTGAGAATTGTCACCATAAATGTCTTTTGCTGTGTCATCCTGGACCATGCCCTCCTTGTCCTCAGACTGTAAATGGTTCCTGTTTCTGTGGCAATGAAAGAAAGAAGGTGAGATGCAGTACATCTAAATGGTCATGTAACCAGCCATGTAGGAAGATGCTATTTTGTAGATCACATAAATGCGAAGCCAACTGTCATGATGGAGAATGTCCACCTTGTAACTATACAAGTCTTCAATTCTGTCAATGTGGCTCTGAAAAGTTGCAGCGTCCATGCAGTGAACCTATTTGGCAGTGTTCAAAACTATGCAACAAACCTTATGCTTGTGGAACTCATAAATGTGAGAAGATATGTCATTTAGGTGTTTGTGGAGACTGTCCTCAGTCTGGCTTGAGGTCATGCCCATGTGGGGCAAATAGAAGAATTGTTAAGTGTCCAGATACAATTGAAACTTGTGCTGGGACATGTGGTAAGAGACATGAGAACTGTGAACATAGTTGTCCAGAAAAATGTCATAAAGGATCATGTTCACCCTGCCAAGTGTTGATAGAAAAGAAATGTCTATGTTCAACTCACACAAGGCTGTTGCCCTGCAGCAAAGAATTTAGATGTGACACAAAATGTAGAGAGACTAGATCTTGTGGTAAACATTCTTGTGCTCGTAAATGCTGCAATGGAACCTGTCCTCCCTGTGAGAAAACTTGTGATAAACCCCTGCAATGTGGGCGTCATAAATGTGCAGCAGTGTGCCACCGTGGGCCTTGCTACCCCTGTCCTAGAGATGCCAAAGTAACATGTAGATGTAAAGATACCTATATTACTGTACCATGTGGCCGAGAGAGGTATGTAAAGCCTCCAAAATGTGATTCTATATgtcaaattaaatacaaatgtgGACATATcaatgaaaataaacatttgtgTCATTTTGGTGAATGTCCACCTTGCAAGGCTATCTGTGATAAGCCATATCAGAGATGTGAGCACAAATGTAAAGCTGTGTGCCACAAGTATGTTTCAGTTGTTTTCAAACAAGTAGAAAAACCAGCAACTCCATGGGAAGTGCAACCACCAAAGACAAAAATAATGGCTCTACAGTGTCCCCCTTGCGAGACCCCAGTGCCAATCATATGCTTTGGTGAACATGAGACTGAGATGCAACCCTGCCATTCTGCTGGAAGACATTGTTGTGGCAGAGAGTGTGGAAGGAAATTAGCTTGTGGCAACCACAAATGTAGTCTGTTATGTCATTTGTATAGTTATGATCCTAACTACCCAAATGTGCCTTATTCATGCCGACCTTGTAACAGAGAGTGTTCAGTGCCCCGTCCAGATAATTGTTTACATAAATGTCCAAAAAAAGGCTGTCACCCTGGCGCTTGCCCACCCTGTGAGATTTTGGAAAGAATAAAATGCTTTTGTGGTGTCACAGATTTGTATATTCACTGTAATGAACTATCTGTAGCAGTTGATGACCAACTGAGTTGTAAGCAGCAATGCCCTAAAAACCTTCAATGTGGACATAGATGCAAAAAAatctgtcataaaagcttgtgTGATAGTTAccaaatttgtattaaaaagacTAAAGTTTATTGTCCTTGTGGAAATCTGAAAAAAGATGTTCCATGCAATCTTTTGCAGACCTCTGAGATGAAAATAATTTGCGATGAGTCTTGTGAAGCAAAAAAATTAGCCATTAAATTGGAAAAAGAATTGGAGGAGAAGAGACAAAAGGAGTTGGAACAAGAGAAAAATCGTAAGGAACTGGAGGAATATGAGTGGAAAATTAGTggcaaaaagaaaaaatataaggaGAAGAAAATTTTTGCCAACGAAGAGAACAGGAGCATGCTGCACAAATATTGGGTTCCTCTTGCAAGTGTGGCTGTGCTATTATCTACTGCACTTTATTTCATCTTGTTTACTATGTAG
Protein Sequence
MARRYRDAAAKMQQNVQKHLDNMKEFSSSEDEEPCDSSVLEGVFQSYCRGGGDNQMLNRTKNLLEEAISGRSVTCLICIGSIKKVDAIWTCTHCHSYFHLSCIQKWSKDSITLLSQETTGPVAVCKPRKVEWCCPKCRNAYSKEEIPTRYSCFCGKTNDPTFHPWLLPHTCGEVCGKKLSIGENCHHKCLLLCHPGPCPPCPQTVNGSCFCGNERKKVRCSTSKWSCNQPCRKMLFCRSHKCEANCHDGECPPCNYTSLQFCQCGSEKLQRPCSEPIWQCSKLCNKPYACGTHKCEKICHLGVCGDCPQSGLRSCPCGANRRIVKCPDTIETCAGTCGKRHENCEHSCPEKCHKGSCSPCQVLIEKKCLCSTHTRLLPCSKEFRCDTKCRETRSCGKHSCARKCCNGTCPPCEKTCDKPLQCGRHKCAAVCHRGPCYPCPRDAKVTCRCKDTYITVPCGRERYVKPPKCDSICQIKYKCGHINENKHLCHFGECPPCKAICDKPYQRCEHKCKAVCHKYVSVVFKQVEKPATPWEVQPPKTKIMALQCPPCETPVPIICFGEHETEMQPCHSAGRHCCGRECGRKLACGNHKCSLLCHLYSYDPNYPNVPYSCRPCNRECSVPRPDNCLHKCPKKGCHPGACPPCEILERIKCFCGVTDLYIHCNELSVAVDDQLSCKQQCPKNLQCGHRCKKICHKSLCDSYQICIKKTKVYCPCGNLKKDVPCNLLQTSEMKIICDESCEAKKLAIKLEKELEEKRQKELEQEKNRKELEEYEWKISGKKKKYKEKKIFANEENRSMLHKYWVPLASVAVLLSTALYFILFTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00875841;
90% Identity
iTF_00876713;
80% Identity
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