Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.4 5.2e+03 -1.7 0.3 23 27 12 16 9 17 0.79

2 4 8.6e-06 0.032 15.0 0.1 24 35 55 66 55 67 0.93

3 4 8.6e-06 0.032 15.0 0.1 24 35 131 142 131 143 0.93

4 4 8.6e-06 0.032 15.0 0.1 24 35 207 218 207 219 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.4	5.2e+03	-1.7	0.3	23	27	12	16	9	17	0.79
2	4	8.6e-06	0.032	15.0	0.1	24	35	55	66	55	67	0.93
3	4	8.6e-06	0.032	15.0	0.1	24	35	131	142	131	143	0.93
4	4	8.6e-06	0.032	15.0	0.1	24	35	207	218	207	219	0.93

Coding Sequence: ATGGTGTCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACGGCCATGCGGCGCGACACCATCCACACGCGGCGCCGGCGCCCGCGCCACGAGCTCAAGACCTCGCGCTCCCAGAGCCCGCTCTACACTTAGTCCGCGAGATGGTGTCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACGGCCATGCGGCGCGACACCATCCACACGCGGCGCCGGCGCCCGCGCCACGAGCTCAAGACCTCGCGCTCCCCTGCACGGCGTGCCGCGCCCCACGGCCATGCGGCGCGACACCATCCACACGCGGCGCCGGCGCCCGCGCCACGAGCTCAAGACCTCGCGCTCCCTCCGCGAGATGGTGTCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACGGCCATGCGGCGCGACACCATCCACACGCGGCGCCGGCGCCCGCGCCACGAGCTCAAGACCTCGCGCTCCCCTGCACGGCGTGCCGCGCCCCACGGCCATGCGGCGCGACACCATCCACACGCGGCGCCGGCGCCCGCGCCACGAGCTCAAGACCTCGCGCTCCCTCCGCGAGATGGTGTCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACGGCCATGCGGCGCGACACCATCCACACGCGGCGCCGGCGCCCGCGCCACGAGCTCAAGACCTCGCGCTCCCGTGAGTACACTCTTATAGAGAGCCCGCTCTACACTTAG
Protein Sequence: MVSTRAACTTSCTACRAPRPCGATPSTRGAGARATSSRPRAPRARSTLSPRDGVNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHELKTSRSPARRAAPHGHAARHHPHAAPAPAPRAQDLALPPRDGVNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHELKTSRSPARRAAPHGHAARHHPHAAPAPAPRAQDLALPPRDGVNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHELKTSRSREYTLIESPLYT*

Sequence clustering based on sequence similarity using MMseqs2