Lrea000082.1
Basic Information
- Insect
- Leptidea reali
- Gene Symbol
- JARID2
- Assembly
- GCA_949711725.1
- Location
- CATIXN010000001.1:1094031-1114924[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-17 4.2e-14 53.8 0.1 7 88 328 406 324 407 0.91 2 2 5 2e+04 -2.8 0.0 35 64 660 689 659 695 0.77
Sequence Information
- Coding Sequence
- ATGGCAACAAATACATCAACTGACGAAGTAACAGACCGAAGCGAAGAAGAACGCTACAAGGTTACATCAATGGAAAATAATGCATCCACTCTCTTATTAACAGACCTGCGTCAAGCAGAGTCATATACCCTGAATGCACCAAACCAATGGAGTGCAGCAAGGGTGAAAACCCCATCGCCTGTCGCATTAACAAATCCAGCCGTAAACCAAAACATCCCGGGCTCATTAAGGTCTTGTATTCCTGTTAATAATGAGATGAGTTCGCAGACATGTGCTTCAAATTCTATCAAAACTATGAAGCAATTGTTATCTGAGTGGGATAAAATTAAACACAATATTTGCAAGAGTTGCCCAAAATGTAATATGCTCTTATTGCTGGATGAAATTatcaaacaatttaacacaaagTTCGGCTTTGATGTACCCCAGTTCAGCACGCCGACGATATCGGATATAATCGACTTAACCTTGGATGACTGTGATAATGGTGAAGATATAATCAACATTTCTGGGCGCTATGCTTCGTACGTTCGAGAGATTAACGATGTGCTTAATAAGACCTTAAAACAAGAGCAACCAGATTCTTTGAATATAGAAGATACAGAAAATAACGGGAATCTTCAATATACAGAAAATTCAAGTaatgatattaatattgatGCACATGATGGatccaataaaagatttaataattcAGTACCCATTACAATTACTAACCCTCTTCCACCATTGGGTGAAAAGGAACAAAGGGCTAATACAATACAAGAGGCCCCAGTTTGGTATCCGACAGCGGAGGAGTTTAAGGACCCTATGAAATACATCGAACATATAACGAAGCAATGTACCCAAGGTATGTTGAAGGTGGTGCCACCCCCACAATTCAAGCCTCCGTGCCAGCTCGGGGGTCCAATACATTTTACCGTGGTGCTGCATTATATATCGCGCATGTATAAGCGCTGGACGCCCATTACCAAGGAAATAACTACAATGAGAGCATACCTTGCGTCGCAAGGTGTCCAGATCGGCCGACCACCTTTTATCAAAGGTATTCAAGTGGACCTACCGAAATTAATGAACACTATTGAAAAGAATGGGGGATTCCGCAATATGCAGACTAAACAGCAGTGGGACAAGGTTGCGCAGGCGATGAATTACACTAGCCTGCGCAATCCGCAAAAGCGACTTGATCAGATGTACGTAAGGCATATATTGCCTTATGCGACCTTGTCGTCAGATGAACGAGAAATATGGTTGGATTCCGTTGATAAAGTATGGCAAAAGCGCTACGAAGCTCTGCTGTTCAGATCCGAAAACCCTCTTCGCAGGGGAGAGAATATATTAGATGGCAGAGAGATGCCGCCCAGAGATGAATACACTGACAAggaagcaaaattattaaaacatatagCGGAGATCGAAGAATGCGTAGTGCGGGACAGAATTATGAATCTGAACTCTTTTAAAAGGATTGCGGCTACTGCAAATGAATTATTCCTTGGAGACGCGAATACGCCCTCTGCAGAAGACGTCGAGATCGTCTATTGGGATATAGTAACCAGTGGCAAGGAGCACGTGTGCGTCTGCGGAGCGTCTGTAGACACTAGTGACGGGGGTCATGGCTTTCCCCTCAAATGTAAGCCGTATTGCGACAGCGCTTGGAACCTCAAGTTCTTCAAGAATCTTCCTGGAAACTTATTGGGCGTCCTTGGCGATGTGCCCGGCGTCACGGTGACGACATTGCACCTGGAAATGGCATTTTCCACAAGCTGTTGGCATCGGGACCCTCATGGCTTGCCCTGGATTGAATATCTACACACCGGAGCCGATAAAATATGgtacAGCCTTCCTGAAGAGGAAAACGAAAATTTCAGAAGAGTTGTGAAGAAATATTGCCCTCATATTTGCCAGAATAAATCAGTATGGCTTCCTTCCGACATGGTTATGATCCCACCGGAAGTCCTTCTACAAGAGGGTGTCAAGCTGACCCGCACGGTACAGAAACCGGGCGAGTATGTGATTGTCTGCCCCAGGGCCTACACATGCTCGGTGGCCACCGGCTTCTCGGTCTCCGAGAGCGTGTACTTCGCACTCTATTCCTCCGTAGGAATCATCGTTAGCTCGTTCGGAGTGTTAGAAATGGATAATGgaaaagtattttaa
- Protein Sequence
- MATNTSTDEVTDRSEEERYKVTSMENNASTLLLTDLRQAESYTLNAPNQWSAARVKTPSPVALTNPAVNQNIPGSLRSCIPVNNEMSSQTCASNSIKTMKQLLSEWDKIKHNICKSCPKCNMLLLLDEIIKQFNTKFGFDVPQFSTPTISDIIDLTLDDCDNGEDIINISGRYASYVREINDVLNKTLKQEQPDSLNIEDTENNGNLQYTENSSNDINIDAHDGSNKRFNNSVPITITNPLPPLGEKEQRANTIQEAPVWYPTAEEFKDPMKYIEHITKQCTQGMLKVVPPPQFKPPCQLGGPIHFTVVLHYISRMYKRWTPITKEITTMRAYLASQGVQIGRPPFIKGIQVDLPKLMNTIEKNGGFRNMQTKQQWDKVAQAMNYTSLRNPQKRLDQMYVRHILPYATLSSDEREIWLDSVDKVWQKRYEALLFRSENPLRRGENILDGREMPPRDEYTDKEAKLLKHIAEIEECVVRDRIMNLNSFKRIAATANELFLGDANTPSAEDVEIVYWDIVTSGKEHVCVCGASVDTSDGGHGFPLKCKPYCDSAWNLKFFKNLPGNLLGVLGDVPGVTVTTLHLEMAFSTSCWHRDPHGLPWIEYLHTGADKIWYSLPEEENENFRRVVKKYCPHICQNKSVWLPSDMVMIPPEVLLQEGVKLTRTVQKPGEYVIVCPRAYTCSVATGFSVSESVYFALYSSVGIIVSSFGVLEMDNGKVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00875937;
- 90% Identity
- iTF_00875937;
- 80% Identity
- -