Ljuv016601.1
Basic Information
- Insect
- Leptidea juvernica
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949711685.1
- Location
- CATIXL010000018.1:3560669-3583917[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.13 2.9e+03 -1.5 0.1 47 83 41 77 22 92 0.66 2 2 3e-53 6.7e-49 168.1 35.3 1 238 119 340 119 341 0.88
Sequence Information
- Coding Sequence
- ATGGCTAACGGTTCTAAGATGCCGACCCCAGAGAACACTGACGAAGAAGGTGAAGTGTTCACCGATGCAGACTTCGGTGATACAGATGATGATTTAGATCGTGATGATAATAGAATATCGAATGTTGCAATAAACGAAACTGTCAATACAGCTTTAAATACGAGTAAATCTGATTGGAATGGAACTAGAGACGAAGTTGATGACACTGTTATAGTCCTTAATCAATCCGGGAATAGTGAAATAAATGGTATTGTCAAGAATGACTTTGATAAAAGTTTGGAAACGCTGAGAGATTCCGACGATAGTGAGACCAATACTTCAATAGTTGGCATACTGGGTGGTCAGCAGAATcatGCCGAGCAACGGTTAGCGGCGCGGCGAGCGGCGCGCGCGGAGGCTCGCGAGATCCGCATGCGGGAGCTGGAGCGGCAACAGCGCGAGCAGGAGGACCATGCCGACAAGGCATACGACATGTACACAGAGACGGTGGGACGCCGCGCTGGAAGCAGGCTAGCGGCGCTCAGTCCGGGCCTGCACTCGCCCAGGCGGAGCTCCGAGGACTCTGACGAGGTCATCAGTGTCAAAGATTTGAGGcACGATCTCAAGGAGGTCGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGTTAGACAATGACAAGGCGGCGCTGGGGTACCAGCTGGAGCTTATGAGGGACAGAATCGAGGAGTTGCAGGAGGAGTACGCACAGTTACAGCGTGAACACAAAGAGAAGTGCTCGAGCCACGAGCGACTAAAGCGCGAGCACGCAGCCCTCGAGCGGGAGGTGGTGGCGGCGCGAGACGCCGTGGCGCGGCTGCGGGCGCGGCTGGAGCACCACGACCACCACGAGGAGGAGCTCAAGGGGGAGCGGCGCCGGCTGCAGCGGGAGGCGCGGGAAGCCCTGAATCGCGTGGAGGAGCTCGAAACGGAGAATAGTCACCTAACGAAACGGCTGGACAAACTGAAGAATGCAAAGTCAGCGTTACTCAAGGAGCTGTGA
- Protein Sequence
- MANGSKMPTPENTDEEGEVFTDADFGDTDDDLDRDDNRISNVAINETVNTALNTSKSDWNGTRDEVDDTVIVLNQSGNSEINGIVKNDFDKSLETLRDSDDSETNTSIVGILGGQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYTETVGRRAGSRLAALSPGLHSPRRSSEDSDEVISVKDLRHDLKEVEEKFRKAMILNAQLDNDKAALGYQLELMRDRIEELQEEYAQLQREHKEKCSSHERLKREHAALEREVVAARDAVARLRARLEHHDHHEEELKGERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -