Ljuv020829.1
Basic Information
- Insect
- Leptidea juvernica
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949711685.1
- Location
- CATIXL010000025.1:6595935-6629662[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-14 1.1e-11 45.4 0.0 1 39 147 186 147 192 0.92 2 2 2e-18 1.8e-15 57.7 0.0 1 43 356 399 356 401 0.95
Sequence Information
- Coding Sequence
- ATGAGTCCCGCATCGGAATCGGATAGCAGTTCTGTGTCGGGAGCTAAAAGTCCTCCCGCGGGACCTCCGCTCCTACAACATTTACTACAGCTGCAGCTTCAAGGACAAAACCCCCAAGCCATCGCGCAGTTCCAACAGATGTTGGCTGCTCTTGCGGCTCTGGGCACCGGGCTGGTGCCGTCGGCGCTCTCTCAAGCCTGGATGATGCAGAGGCTAGCAGGAGCCAGGCCACCACTAGACGGTGTCCCCGAAGTATGTGAGAAGGTGCCTCCAAGCTCATCGCCGACGGTGGCAGAACAGCCACTAGACCTCAGCGCCAAGTCGACCTCCAGTACTAGTGGAACTCCTCCCCCGGACATCAAAGGCCACAGCTTGGACAACACGAGGTTAAAGCGCGCAGTTCTCGAAGGTTCTGGTAACAGCACTCGTCGCACGTACACAGAAGACGAGCTCCAGTCCGCATTGAGGGACATTCAGTCCGGACGACTTGGCACGAGACGCGCTGCAGTTGTCTACGGCATCCCTCGCTCCACGCTCAGAAATAAAGTCAATAAGTTTGGCCTTGCAGCTGAAACTGGCCAAGAGTCTGACCAGGACAGTGATCCTGAAAAACCAGGCACGCCATCCTCTGCACCCACACTGCCAATTCTTAAAATACCATCCTACCCTCCACCTGATGAAAAAAGTCCCTCCCCGGCCACTTCTGTCACCACGCCAGTAACGCCAATCACTCCACTACTGTCTCATCAGCCGTCGCTAAATCCTCCTTCTCAGCTACTACTACCACCCTCAGTCTTCGCAGATCCTCCTGCACCACAACATTTATTCACGTCACTAAGTGACGTCATAGCTAAGAGTATTAGTCAAAAGTTTCAACAACCATTAGAGAGACCTCAAGCGGATATGTACATGAGAGCACCGGATAGACACGTTTCTGTTATTAAAACACCGCCAGATAATCAAAGGAACTACGCAGTTCCTAGCAACTCAAAGGCGACGAACAATGGTCAACCGGCGACTGGTGGGAAAGGGACAAGGCCTAAGAGAGGCAAGTACAGGAATTACGATAGGGATAGCCTAGTAGAAGCTGTGAAAGCGGTACAGAGGGGCGAGATGTCAGTACATCGCGCAGGGTCCTACTACGGCGTTCCTCATTCTACACTGGAGTACAAAGTTAAGGAGAGGCACTTGATGCGGCCTCGGAAGCGAGAGCCAAAACCCCCACAGGATACGAAGCCACAGCCGCCGAAACCGCCTCCTAAGCCCGTTAAGCCATTTACGAATGGTATGAATGGTCCGGATAGCTATCCACCGGGTTATCCTTTCTGGCCGGGCACGGGTTTCGCGCCGCCACCAACGCCGGACTTATATACGTCGCATATGATGCGGCGTCTCCGGGGGGAGGCACCGCCAGCTAACGGGTCGTTCCTCGAGGGGATAATACGGTCGAGTCTAGAGCGGCCGGGGACGGCGATTCTGCAGCGACTGACTTCGGAACCGCGAGCGGAAGCGCCCAGCTTACTGCGGCGACTGGCTGGTGAGCCGGACGAGGAGCCCCCTGCGCGGCGCCCCCGCCTTGACTCTGACCATCAGCTTGCGGCAGAAATGCGAGAGGCAGTCCAGCGACTCCGTGCCGACAAAATGCGTCCCCGCAACGGAACCCCCACGCCGCCCGGTCGGCCCCCCTCGCCACCTCTCGAAGCCCCTCAACAAGCCCCCCCACACACAGCCTAG
- Protein Sequence
- MSPASESDSSSVSGAKSPPAGPPLLQHLLQLQLQGQNPQAIAQFQQMLAALAALGTGLVPSALSQAWMMQRLAGARPPLDGVPEVCEKVPPSSSPTVAEQPLDLSAKSTSSTSGTPPPDIKGHSLDNTRLKRAVLEGSGNSTRRTYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLAAETGQESDQDSDPEKPGTPSSAPTLPILKIPSYPPPDEKSPSPATSVTTPVTPITPLLSHQPSLNPPSQLLLPPSVFADPPAPQHLFTSLSDVIAKSISQKFQQPLERPQADMYMRAPDRHVSVIKTPPDNQRNYAVPSNSKATNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDTKPQPPKPPPKPVKPFTNGMNGPDSYPPGYPFWPGTGFAPPPTPDLYTSHMMRRLRGEAPPANGSFLEGIIRSSLERPGTAILQRLTSEPRAEAPSLLRRLAGEPDEEPPARRPRLDSDHQLAAEMREAVQRLRADKMRPRNGTPTPPGRPPSPPLEAPQQAPPHTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078995;
- 90% Identity
- iTF_00876073; iTF_00875223;
- 80% Identity
- iTF_00876073;