Lspi001480.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leistus spinibarbis
Gene Symbol
Rreb1
Assembly
GCA_933228875.1
Location
CAKOGB010000023.1:1164355-1173844[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0002 0.017 15.9 0.7 1 23 103 125 103 125 0.98
2 16 0.0002 0.017 16.0 0.3 1 23 137 159 137 159 0.98
3 16 2.5e-05 0.0021 18.8 3.6 1 23 165 187 165 187 0.99
4 16 8.6 7.2e+02 1.4 0.3 1 20 258 278 258 282 0.67
5 16 2.8 2.3e+02 2.9 4.6 6 23 292 310 288 310 0.93
6 16 0.97 81 4.4 0.2 1 20 363 382 363 384 0.94
7 16 0.073 6.1 7.9 0.1 1 23 511 533 511 533 0.96
8 16 8.3e-06 0.00069 20.3 0.8 1 23 543 565 543 565 0.99
9 16 0.00084 0.071 14.0 3.1 1 23 571 594 571 594 0.97
10 16 0.00072 0.06 14.2 2.8 1 23 964 987 964 987 0.96
11 16 0.0011 0.091 13.7 1.4 2 23 1227 1248 1226 1248 0.97
12 16 0.09 7.5 7.6 4.2 1 23 1254 1277 1254 1277 0.96
13 16 0.11 9.1 7.4 4.0 1 20 1311 1331 1311 1335 0.94
14 16 0.2 17 6.5 2.3 1 23 1390 1413 1390 1413 0.95
15 16 0.017 1.4 9.9 0.5 3 23 1460 1480 1458 1480 0.93
16 16 0.0016 0.14 13.1 5.5 1 23 1486 1508 1486 1508 0.98

Sequence Information

Coding Sequence
ATGCGCGACACTGCACCAAGTACGCCACTGCCCGGTCCCCATGTGCCCCTAGCGAATCGACTTCTCCAGCCTGCTTCACCTACTGTTATCAATATGGATGACAGCCTGAACAACACCAAAGAACTCCAAAGAAAATCCGACTCAACCACCGATGAAAGTATGCTAGAGCACAGTTCAGCCGTTTCGTTAGAAACCAGCCAAAATGGCGATTCAGACATGGAACCGATGGACATCAGTAAAACGACTGTCGACTCAAGCGACGCACACAGCGACTGCAGCTCACCCAGCAATAACGACTACAAAAAATACTTCTGTCCCATCTGCGACATAACACTAATCTCCCAACACGAATTCACCCTACACATACGATCCCACAACAACGACAACGAAATCATCACCGACAAAGGATTCACCTGTCGCATTTGCTCAAAAGTGTTAAGCTCCAGCTCCAGCTTAGACCGACATGTGCTGGTGCACAGTGGCGAGCGGCCATTTAAATGTAAATTGTGCGCTGTTACATTCACAACGAATGGAAACATGCATCGGCACATGCGAACGCATACCCACAAACCTGGAGAGAATTATGAATCTGATGGTAGCACTGATAGCAATGCCAGCGAACATTCTGGCAAAACGCGTAAGCGACGCTTAGAGTTTAACAATAATAAACTTGTGGACAATAAACGTAAATCTGATTGTTTTGAGGACGACGATAATGCGAATCGTCGCAAAAAGAACTACAACAACAACAATATAAACGAATTGCAAAAGTTTCATTGTCCTGTTTGTGACCGGGAAGATTTTGCTTCTTTGAACGTCTTTGAAACACATTTAGAAGACAACCATCCTGAATATGAAGTGAATTGTATTTCATGTAACTTGAGTTTTAAGAACCACCGGGCACTCAACTTACATCGTCACATGAGCCACAACACTGAGCAGATTAACAACATTAACAACAAAGCCAAAAATGCTCATTTAGGCTTCAAAGATTTAACTTTTGTAGACTTCTCAAGTGAAAAATTCCCGCATATAGCTCGGTACGCGTGCGAAAAGTCCTTACATAAACCTGTAACAACTCAAAAATTCGTTTGCGACAAATGCGTCCTAGCGTTTCCTTGCTCGAGCGCCTTGCAAATGCATCAAGACGAATGCCTGAAAGGCCGCAACCACTTAGAATACCCTACAGATCTCTCCCGAAAGACTTCCGATGAAGAAATACGTCGTGATAACTTCTTCGCGCATTTAGACTTACAAAATAAGTCTCCTCCAACAAGCCCAAGTTCGGCAGAAGTCCAGGAAACGCGTCCAGATATAAAACCAGTCATAGACTCCAAAGATTTAGCTGATATCCAATCGATTCTATCAATGACTTCTAACGGTAGTTTGCTACAACATTTACGATCTAAACCTCAAACAGAATTAATACCGTTGCCGCAGGAAACTGTTAGGACGCCAGAGCAACACCCTGAAGAAGAGTCTCAGGATATTTTCGCTGCCGAGTTTCGAAAGATGAAACTTCGCGGCGAGTTCCCATGCCGGCTTTGCACGGCAGTGTTTCCAAACTTGCGGGCCCTTAAGGGTCATAATCGAGCTCATTTAAATGGGAATGGAAATACAGGACCGTATAGATGTAATATGTGCCCGCATAGCTCCATTGACAAAGCTGCTTTGATCAGGCATATGCGGACACACAATGGGGATCGTCCGTACGAGTGTTCTTTGTGTAATTATGCGTTTACTACGAAAGCGAATTGTGAACGTCATTTAAGGAATCGACATGCTAAGACTACAAGGGAAGAAGTTAAGAAAAATATAATTTATCATCCGTCCGAAGATCCTACTAATGATGAGGTTAACAAATTGAATACTTCTCGTGACATGAAGCATAGTTTCTTGAATAGCTCGACCGAAGATGACGTACCAGAAAAACTAATGAACTCAACGCCAATACCAAAAGATCGTATAACTCCAGAAATTCGAAATCTAATCCTACCGCAAGCCTTAGGGATTGCAATTCCTCCTCTAATACCTAAAGATCTTTTACCCAAATCGCAATCCCATTCGCCAATTTTGTCAATTAAAAAGGATTTGTTACCGCATCGTTTGATTCCTAAAGATGAAAAGCTACCATTTCCTTTCCCTAAACCACCAAGTTTTTCCTACAAAATGGAACTTTCTGAAAAACTGGAGGAGCCAAAAATACAAATCAAATGTTTGGATGGTTTAAAGCAAATACCAGATTACGATATACAATCCGATGATGACGAATCGAATCATTACGACGATTATCCAAAAGTTGAACATCCAATCGATTTGAGCATGGATGTTTTGGATTTGAGCAAGAAGAAAGAACAGCCCAAGGAAGTTGTAGATGAACCACAAGATTTTACAAAACGAACTTTAGAATCTGCTCCTCTTCATCCGACTAGTGCCGCACAATTGTTGCTGGCTCAACAATTATTCAAAAATCGCTTCTATCCAAATCCATTATCACTTTACCAACATCCTAGCTTATTTCCTCCTCATCCATATCAGTTGTTGTTTCCTCAAACATTCATGAACAGCCAGGATATAAAAGAAAGAATGTTAAGTCTACAATTAAGCGGTGGCAATATAATTAATGAGCAATTTTCACCAATTCCAAATGGCTTGCAAGCGTTGCATCAACAAGCAATGTCCAAAATGCAAGATTTAAACTACCAAAAAGACGACGAAATTAAACCACCTCTACACATAAATACCCAACTAGGGGACAGTGTGAAATTGCACTCCCCAAAGCAGAAGACCCCAGACATGATCCACAGTCCGAATTCAGTGAAAATGGTCATAAAAAACGGTGTCCTAATGCCCAAGCAAAAACAACGTCGTTACCGAACAGAACGGCCATTTTCCTGTGAACATTGTTCAGCTAGATTCACACTACGCTCAAACATGGAGCGACATATAAAACAACAACATCCGCAATTTTGGTCACAAAGACAACGATCTGGGATCACTCCGACTGGACGAAAGCCCACGCCACCCCAGACGTCCACAAAACCTCCATTTTATGAATTAAATGTACCAAACTACGACTTAAACATACCAAAGTTAAACGACTCGTTAGTCAACGAAACCAAAGAAATGATGCAAATTTCACAACAAGTCAAATACGCAATTTTAGCGCAGAAATTAAAAGCGCATAATAATGACTCTAATTTAACCCAACCAAGCAAAGACGAGGACGAAGATGCTTTGATTATCGATGAAGAACTCTCAAGATCTGAAGTGCATCCAATGGACTTTTCCAATGACCACAAACCAAGGTCGTTGGATGAGAAAATGCTTCAATTGAGACAGATCCGTGAGAAGGAGATGAAACTCAATGAAGAACAACGATTGGCTGTGTTGCACCATAAACCTGAAGAAGTGGGAAATCAAGATCTAGTTCCAGTGTCAAGGTTGCTGGATAATGCAGTCAGTTCCCAATTGCCGTTTCGCGAGTACTTTCGCAGGGATGGCGAAGAGAATGAAGTGGAAGGTGTCAGCGAAGAAGACGAGGAAGGATTGGTGGCCAGTGGGAGTACTAGCGAAGGGAATGGATCTGGAAGCGATGAAAATAAATCTGAAAACGAAACCCCGAACACTGAATCTGGCAAGAAAAAATCTGCGTACTCTTTAGCGCCCAACCGGGTAAGTTGCCCATACTGCCATCGCAAGTTCCCTTGGACATCATCCCTCCGGCGACACGTCTTAACCCACACTGGCCAAAAACCATTCAAGTGCTCGCAATGCCCGCTTCTTTTCACCACTAAGTCAAACTGCGACCGACACTTGCTCCGAAAACACGGCAACACATCTAACCCAGAAACTACATCGAATAACAACAACAACAACAATAACAGTAGCAATCAGAATTACATGATGCGAAATGTGCCCGAACGGCCCTACAAATGTTCTAGTTGCCCCAGTTCGACATTTTCAACATTGAGCAATTTAAAAAAACATATGAGTTGTAAGCACACAGACAAAATTGAGGATGTGAGGCCTCCTAGCCGAGAAAGCTTCGCCAGCTCAGAAGACGAACGCAAATCTGAAAACAAAAGCGATTGGGAATCCCAGATTTCTCAATCCAAACTAACAATACCGAATTCAGAATTGGGGAGCACGAATTCAGATTTGCCGTTCAAGTGTCATTTGTGCGAATGTTCGTACGCAGATCGCCAAGAAGCGTTGGATCACATCAAAGATAACCATTGCTCTGAGTTTGAACTGTTGATGGCAAAAGGCGCTTTAGATCAGAATCCGACTGAAGAGCTCCCGACTCCTCAAGACCCTGAAGACGACGGTGATTTACGAGGGAAATTCCCGGATTACGCTAATCGTAAAGTAATGTGTGCGTTCTGTATGCGACGTTTTTGGTCTGCAGAAGATTTGCGACGGCACATGCGTACCCATACGGGGGAGAGACCGTTTTCTTGCGATATTTGCAATCGTAGATTCACGCTGAAACATTCAATGTTGCGACACCGCAAGAAACATAATCTAACAAACAACGATGAGAATTTAGTTTCTGGAGATGAAGAGCACTATGATAAGTTAAGGATGAATAATAATAATAATGTGCCGAAATCTAGCGAAGAGGATTCAGGCGCGGAAGGCAATGATTTGATCGGGAATTTATTGGGAATTCGGGATAAATCGATTATCGATCAGGTGTTAGTGTCATCTGCTGACGACGCGGCGAAACTACTTGGTGTTAACCATGGTGTTAATGAATAA
Protein Sequence
MRDTAPSTPLPGPHVPLANRLLQPASPTVINMDDSLNNTKELQRKSDSTTDESMLEHSSAVSLETSQNGDSDMEPMDISKTTVDSSDAHSDCSSPSNNDYKKYFCPICDITLISQHEFTLHIRSHNNDNEIITDKGFTCRICSKVLSSSSSLDRHVLVHSGERPFKCKLCAVTFTTNGNMHRHMRTHTHKPGENYESDGSTDSNASEHSGKTRKRRLEFNNNKLVDNKRKSDCFEDDDNANRRKKNYNNNNINELQKFHCPVCDREDFASLNVFETHLEDNHPEYEVNCISCNLSFKNHRALNLHRHMSHNTEQINNINNKAKNAHLGFKDLTFVDFSSEKFPHIARYACEKSLHKPVTTQKFVCDKCVLAFPCSSALQMHQDECLKGRNHLEYPTDLSRKTSDEEIRRDNFFAHLDLQNKSPPTSPSSAEVQETRPDIKPVIDSKDLADIQSILSMTSNGSLLQHLRSKPQTELIPLPQETVRTPEQHPEEESQDIFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNGNTGPYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKNIIYHPSEDPTNDEVNKLNTSRDMKHSFLNSSTEDDVPEKLMNSTPIPKDRITPEIRNLILPQALGIAIPPLIPKDLLPKSQSHSPILSIKKDLLPHRLIPKDEKLPFPFPKPPSFSYKMELSEKLEEPKIQIKCLDGLKQIPDYDIQSDDDESNHYDDYPKVEHPIDLSMDVLDLSKKKEQPKEVVDEPQDFTKRTLESAPLHPTSAAQLLLAQQLFKNRFYPNPLSLYQHPSLFPPHPYQLLFPQTFMNSQDIKERMLSLQLSGGNIINEQFSPIPNGLQALHQQAMSKMQDLNYQKDDEIKPPLHINTQLGDSVKLHSPKQKTPDMIHSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSGITPTGRKPTPPQTSTKPPFYELNVPNYDLNIPKLNDSLVNETKEMMQISQQVKYAILAQKLKAHNNDSNLTQPSKDEDEDALIIDEELSRSEVHPMDFSNDHKPRSLDEKMLQLRQIREKEMKLNEEQRLAVLHHKPEEVGNQDLVPVSRLLDNAVSSQLPFREYFRRDGEENEVEGVSEEDEEGLVASGSTSEGNGSGSDENKSENETPNTESGKKKSAYSLAPNRVSCPYCHRKFPWTSSLRRHVLTHTGQKPFKCSQCPLLFTTKSNCDRHLLRKHGNTSNPETTSNNNNNNNNSSNQNYMMRNVPERPYKCSSCPSSTFSTLSNLKKHMSCKHTDKIEDVRPPSRESFASSEDERKSENKSDWESQISQSKLTIPNSELGSTNSDLPFKCHLCECSYADRQEALDHIKDNHCSEFELLMAKGALDQNPTEELPTPQDPEDDGDLRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICNRRFTLKHSMLRHRKKHNLTNNDENLVSGDEEHYDKLRMNNNNNVPKSSEEDSGAEGNDLIGNLLGIRDKSIIDQVLVSSADDAAKLLGVNHGVNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01039611;
90% Identity
iTF_01039611; iTF_01041226;
80% Identity
-