Basic Information

Insect: Leistus spinibarbis
Gene Symbol: bab2
Assembly: GCA_933228875.1
Location: CAKOGB010000210.1:174513-183426[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3.8e-12 5e-09 36.1 0.0 1 39 359 398 359 402 0.90

2 4 1.3e-12 1.8e-09 37.6 0.1 1 39 413 451 413 454 0.95

3 4 1.7e-18 2.3e-15 56.4 0.0 2 45 469 513 468 513 0.96

4 4 1.7e-19 2.2e-16 59.7 0.0 1 43 520 563 520 564 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3.8e-12	5e-09	36.1	0.0	1	39	359	398	359	402	0.90
2	4	1.3e-12	1.8e-09	37.6	0.1	1	39	413	451	413	454	0.95
3	4	1.7e-18	2.3e-15	56.4	0.0	2	45	469	513	468	513	0.96
4	4	1.7e-19	2.2e-16	59.7	0.0	1	43	520	563	520	564	0.96

Sequence Information

Coding Sequence: ATGGCTGGGCAACATTActgcctaagatggaacaattaccaaagcaacatgacgtcggtgttccatcagctgttgcaaacggaatcgtttgtggacgtcacactcgcgtgcaatgacctttcattgaaggcacataagGTTGTGCTATCGGCGTGTTCGTCATATTTCCAAAAACTACTACTAGAAAACCCATGCAAACATCCAACAATAATAATGCCGCAAGACGTGTGTTTTTCTGACCTAAAATTCATCATTGAGTTTGTGTACAAAGGAGAAATTGATGTGTCACAAGCGGAATTACAGTCGTTACTGAAGACAGCCGATCAACTGAAAATCAAAGGGCTGTGCGAAGTATCGGAAGACAAAGAAAACACGTCCCAAGACCGACAATCACCCGTGATAACACAAAGACAGTTACCAAAATTCCGTAGATTATTAAACAATAAGCGAGCTAGATCTTCAGAAAATAACCGACGGCCGCTCAAGAAGGAGGAGTATTCTGATAAATCAGAGTGCATTACTTGTGATGAACCGATAGACGAAGACAATGATATGCCAGTTATAGTGGAGCAACGAACAACGACACATTCAAAGAACAACGGACAAACAATTATGACTGGACATGGCCTACTACCTGCTCAAGCTCTATTCCCTCAGTTGTGTGTTGACAACGAGGAATTTCCTCCCGAACCCCCAGGACCTGCGGCCACACCAGTGCGACATGTTGAAATGCATGAGTGTTCGCCACCACGAACATTTCTCACAAATACAGAATCGTCACAAAGAGGAGAGTTAATAGAAACCAATTTGGGAACCGACACAAAAATAAAATTGGAAACATTAAAATCATTGGATCAATCGGATTCGATAGATATAGATAGTCATATGTCTAGTCATTCAATGGGCAGCCACAGTGAAGACGAAAAAGGAATGCATACGATGATGATTACGCCAGAATTCATGGGTTTAATACCAACGTCTAGTTCACACTCCGACATTAGTAACGATGGCCAAAACATGCAAAAAAACGGACACTCTGAATCGCACCGGCATTCAAGTGGGCCGAAAACGTGGACCCAGGAAGACATGGAACTTGCCCTAGACGCGTTAAGAAACCACAATATGAGCTTAACAAAAGCATCCGCAACATACGGTATCCCATCAACGACGTTATGGCAACGAGCGCACCGACTAGGCATCGACACCCCAAAGAAAGAAGGCCCAACGAAATCTTGGACGGAAGATAGTTTAAATTCAGCTTTAGAAGCCCTACGAACCGGAACAATATCCGCCAATAAAGCGAGTAAAGCATTCGGCATTCCCAGTAGTACCTTGTATAAAATAGCGCGACGAGAAGGCATTCGTTTAGCAGCACCGTTCAATGCAGCACCAACCACGTGGTCGCAGGAAGATTTAGAGCGAGCCCTGGAAGCGATTCGATCCGGGCAAACGTCTGTGCAACGGGCGTCAACAGAATTCGGCATTCCAACAGGGACACTATATGGCAGATGCAAACGGGAAGGAATCGAATTATCTAGATCGAATCCTACGCCTTGGTCAGAGGATGCCATGGGCGAAGCCCTCGAAGCTGTCCGGGTAGGCCAAATGTCGATAAACCAGGCAGCGATCCATTACAATTTGCCGTATTCGTCGTTGTATGGGCGATTTAAGCGGGGGAAGTACGATACGGACCATAGTGATAACGCGGACAGTCAGAGCGATCAAGTGATTGTGAATTACCATTCGCAACACCATCTGGGCAATGTGTCGCAGTATCAGCACCAGAACAGTTGA
Protein Sequence: MAGQHYCLRWNNYQSNMTSVFHQLLQTESFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCFSDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVSEDKENTSQDRQSPVITQRQLPKFRRLLNNKRARSSENNRRPLKKEEYSDKSECITCDEPIDEDNDMPVIVEQRTTTHSKNNGQTIMTGHGLLPAQALFPQLCVDNEEFPPEPPGPAATPVRHVEMHECSPPRTFLTNTESSQRGELIETNLGTDTKIKLETLKSLDQSDSIDIDSHMSSHSMGSHSEDEKGMHTMMITPEFMGLIPTSSSHSDISNDGQNMQKNGHSESHRHSSGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSQEDLERALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDTDHSDNADSQSDQVIVNYHSQHHLGNVSQYQHQNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00766313;
90% Identity: iTF_01040246;
80% Identity: iTF_00873178;