Lko_18153-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- osa
- Assembly
- GCA_002313205.1
- Location
- NNCF01127036.1:73323-110456[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-27 1.2e-23 82.8 0.0 2 89 695 779 694 779 0.95
Sequence Information
- Coding Sequence
- ATGCCTTGGGCAGTACCTAGCTTGAAAGTGGGAGGGGAACGAGCATCATGGCAGTCTTCTCCTGCATCGCGTCGCGAGCGACATCAAGCTGTCTTTATGGGAATTAGACtttttcgtcgTTACCAGGATGAGACGACTAAACCTCCTGTTaaTAGGTTGTCATTATTTGTTAAACTCACTCATGCATTTGAAGTTTTATGGTGTTGTTTGAGTGACATGATTATTGATAAGGAGAGAATACTTTGTTATGGAAGTAAAAGGCATTATGCAGTCCTTTATTGGAAAAGACTAGGGTTACATAGAATGCATTTGGCGAAAGTATTTGctgtcattaaaaattatatcaggATTGAGCCGTTGAGCTGTAAAGCTACTGCCTTGGAATGTTATATTCTTCCTgatCTGACAGGGCAAAACAGCAATGACAGTACCAGTGGTCCTGGTGCGCCTGGCACTCCAAATTCCCAGGGTATGAGGCCAACGCCCTCACCCACTGGCTCAACGGGCTCTCGCTCCATGTCACCCGCTGTTGgcCAACAGAATATTCCAATGCCTCCACGCCCTTCCAGTGGCCAATCTGATGGAAGTGGACCTGCACGAATGAGTCATTCTCCCATGGCCACTCCCGGTGGTTACCAACAGCCTTTGGGACCACCACACATGCATGGTGCTTATAAATTGGGGTCACATCCTCCTGGCATTGTACCTCCAAGTGGTCCACAAATGGGCCCATACACCCCACCGGGTCAGCAATATTCCCAAGGAAATTATAGTGCACGTCCTCAGGGGCCAATAGGCAATATGCAGTATGGACCAACACATGGGTACAGTCAACAAAACCCTCAGGGCAATAGCTTAGGAGCTGGCCAGTACCCAAATCGCCCCATGCCTAATCATGTGCCCCACACACAATTTGGAGGATACCAGAGTTGGGGAGGTCCTGGATTGAACCAAGGACCCCCAGCAAATGCTGTTGGGACTCCTGGCAATCAGATGCCTCCCAAAGGACCTGGTCCTGGTCCAGGTCCTGGAACAGGACCTCAGACACCCAGTGCATCACCTCAAGGGACAAATGCTAGCACTGGTCCTCGCTCACTCACTCCGCCACATTACCTCAAACAACATTtacaaCAGAAGATGGGATATGGAACAACAGGAGCCAGTATTCCTCCTGCTCCTGGAGGTCTTCAGGTTAGTTATGGTGGGAGTCCATCAGTTCCTAATTCAGGAGTAAGTGTTGGACCAACACCAAATATTGTCCCTTCCATGGGACCAGGCAGTGGAATTCACCATCATGGACCTGGTAGTATGTCTTCACCAATGGGACCTCCTACATCCGGTCACCTTCATCCTGGAATGGGTCCTCCAGCTCCCAACATGGGACCCCCTGGTCCTGCTGGAATGGGTCCTGGCAATGCTGGAATGGGTCCACCTTCATCAGGAACATCAAGTTCAACTAATAATGCGGGCCCCATGTCAGTATCTTCTCCAAGTACTGTACTTCAAGGGCCACAAGGCCCATCTCTCTCCACCAATGCTGCATCTCCAGTTCCAAACAGTCATCATGATGGTCCTATGCCTCCACCTATTAGCTCAAGCAATTCAAGTTTGTCTCACCCTTCTGCAACGGGACCTGTGCCTGGTGCTACGCATCCTGAGATGAATTCTGTTTCCGAATCTCCTCATGATAATGGTATTGCCACAACTACTACAGGTACTACTACAACCAATGTAACACCTGCAACATCTGGAACAGTGACTTCTGTTGTAACCACAGGACCTGACGGAGCGCCAATGGATGAGGGTTCACAACAGTCTACTCTCTCTAATGCTTCTCAAGCTTCTGGAGAGGACCAAAGCTGTACACCTAAGTCACGGAAAGATGGTTCAGTAGTAGGAGGTTATCATAGTCATCCTCCCACACCTCAGAGCACTGTGCCATCTCCGGGTGCTGCTAGTTTAAATTCAGTACATGAAGAATATGGTGATGTGAATAGTCCAAGTTGGCCCCGTACTCCAGCCAGTCCTGTGGGTAAACCTGATAGCCTGTCCAAACTGTATGAGATGGATGATAACCATGAACGTCGTATGTGGTTAGATAAACTTCTTCAGTTCATGGAAGAACGGGGAACACCTATTTCTGCTTGCCCAACCATCTCCAAGAACCCCCTCGATCTCTTTCGACTGTACCTGTTTGTGAAGGAGAGAGGGGGCTTCATGGAGGTAACAAAAAACAAGACTTGGAAGGATATTGCAGGGTTGCTAGGAATTGGAGCATCATCAAGTGCAGCGTATACTTTGAGAAAGCATTACATGAAGAATCTTTTGGCATTTGAGTGTCATTTTGATCGTGGTGGCATTGATCCACAGTCCATAATTAATCAAGTAGAAGCTTCATCCAAGAAAAAGGGTGGGAAAGCAGCTTCTGTACCTTCACCAGGATCTTCAAATTCACAAGACTCATTTCCTGCTGCTGGCTCTAGTGGAACTTCAATGGATGGCTTTTCTTATGGGTACCCACCTGGTAGCACTCCCGACTTCAACACACCTCCTTTGCAGCGGCCTGCAGCACAGACAAATGCTCCATCACCTCATACAGACACCATGACACTGAATCCAAGACACTGCTTATCTACCTGCCCGCTAGGTGTAGGGGTGCCGACGCAAGGTCCGGGGGATAACATTAGCGTTTCCAACCCTTTTGATGACGTGGGTCCCCCAGGACAGCCCCCAGTCCAGCGGCTGGGCTTGCCCAATTCATATGGACCATCCTATGGGCCTGCGGGTGGCTCCCCTCGCCCCCAAGttgtgtaa
- Protein Sequence
- MPWAVPSLKVGGERASWQSSPASRRERHQAVFMGIRLFRRYQDETTKPPVNRLSLFVKLTHAFEVLWCCLSDMIIDKERILCYGSKRHYAVLYWKRLGLHRMHLAKVFAVIKNYIRIEPLSCKATALECYILPDLTGQNSNDSTSGPGAPGTPNSQGMRPTPSPTGSTGSRSMSPAVGQQNIPMPPRPSSGQSDGSGPARMSHSPMATPGGYQQPLGPPHMHGAYKLGSHPPGIVPPSGPQMGPYTPPGQQYSQGNYSARPQGPIGNMQYGPTHGYSQQNPQGNSLGAGQYPNRPMPNHVPHTQFGGYQSWGGPGLNQGPPANAVGTPGNQMPPKGPGPGPGPGTGPQTPSASPQGTNASTGPRSLTPPHYLKQHLQQKMGYGTTGASIPPAPGGLQVSYGGSPSVPNSGVSVGPTPNIVPSMGPGSGIHHHGPGSMSSPMGPPTSGHLHPGMGPPAPNMGPPGPAGMGPGNAGMGPPSSGTSSSTNNAGPMSVSSPSTVLQGPQGPSLSTNAASPVPNSHHDGPMPPPISSSNSSLSHPSATGPVPGATHPEMNSVSESPHDNGIATTTTGTTTTNVTPATSGTVTSVVTTGPDGAPMDEGSQQSTLSNASQASGEDQSCTPKSRKDGSVVGGYHSHPPTPQSTVPSPGAASLNSVHEEYGDVNSPSWPRTPASPVGKPDSLSKLYEMDDNHERRMWLDKLLQFMEERGTPISACPTISKNPLDLFRLYLFVKERGGFMEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYMKNLLAFECHFDRGGIDPQSIINQVEASSKKKGGKAASVPSPGSSNSQDSFPAAGSSGTSMDGFSYGYPPGSTPDFNTPPLQRPAAQTNAPSPHTDTMTLNPRHCLSTCPLGVGVPTQGPGDNISVSNPFDDVGPPGQPPVQRLGLPNSYGPSYGPAGGSPRPQVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00759119;
- 90% Identity
- -
- 80% Identity
- -