Basic Information

Gene Symbol
osa
Assembly
GCA_017312745.1
Location
Scaffold41:7177625-7226728[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-26 1.8e-22 80.2 0.0 2 89 578 665 577 665 0.92

Sequence Information

Coding Sequence
GTTCCCCTTTTGAGACAAGAGACTTCAAACACCGATGCACCAGATGTGGGTGATCTGACAGGTCAGAACAGCAATGACAGTACCAGTGGTCCTGGTGCGCCTGGCACACCAAATTCTCAGGGTATGAGGCCAACGCCCTCGCCCACTGGCTCAACGGGCTCTCGCTCCATGTCACCCGCTGTTGGCCAACAGAATATTCCAATGCCTCCACGCCCTTCCAGTGGCCAATCTGATGGAAGTGGACCTGCACGCATGAGTCATTCTCCCATGGCCACTCCAGGTGGTTATCAACAACCGTTGGGGCCACCACACATGCATGGTGCTTACAAGATTGGGTCTCATCCTCCTGGAATTGTACCTCCTACAGGACAGCAAATGGGACCCTACACCCCCCCAAGTCAACAGTATTCACAAGGTAACTACGTTGCACGTCCACAAGGGCAATTAGGCAACATGCAGTATGGGCCAACCCATGGATATGGTCAACAGAATCCTCAGGGTAATAGTTTGAGTGCAGGCCAATACCCTAATCGTCCCATGCCAAATCATGTGCCTCATTCACAGTTTGGTGGCTACCAGGGCTGGGGCAGTCCTGGCATTGGCCAGGGTCCGCCCTCTAATGCAGTGGGCACTCCGGGAAATCAAATGCCTCCCAAAGGACCAGGACCTGGTCCAGGGCCTGGCAGTGGCCCTCAACCGCCAAGTGCATCAACTCAGGGCACAAATGCTAGCACAGGGCCTCGTTCTCTTACTCCACCTCATTACCTCAAGCAGCATTTGCAACACAAAATGTATGGAAGCTCAGGATCAAGTATACCCCCTAGTGCTGGAAGTCTGCAAGTGGGATATGGTGGCAGCCCTTCTGTCGGCTCCAATTCTGGGGTGGGTGTGGGTCCCAGCCCAAGTTTAGGCCCTGGCATGGGTTCTGCTGGAGGCATTCATCATCACGGTCCTGGCAGCATGAACTCACCCATGGGACCTCCAGCATCTGGTCACCTACATCCAGGCATGGGACCTCCTGCACCCAACATGGGGCCACCTGGTCCTAGTGGAATGGGGCCTGGAAACCCTGGAATGGGTCCACCCTCTTCAGGAACTTCCAGTTCAACTAATAATTCGGGACCTATGGCTGTATCCTCACCAAGTGCAGTTCTCCAGGGATCGCAGGGTCCATCTGTTTCTACTAATGCTGCTTCTCCAGTACCAAATAGTCACCATGATGGACCTATGCCTCCACCAATTACATCGAGTAATTCAAATTTGTCTCATCCTCCTCCGGCAGGACAGGTGCCTAGTGGCAGTCATCCAGAAATTAATTCAGTATCTGAATCTCCTCATGATAATGGGATAGCCACAACTACAACAGTTGCAGGTACCACACCAACAAATGTGACACCAGCTACTCCTGGAACAGTAACATCTGTTGTGACCACTGGTCCAGATGGCACTCCATTGGATGAGGGATCTCAGCAGTCAACTCTTTCAAATGCTTCGCAAGCTTCTGGGGAGGATCAGAATTGTACTCCAAAATCACGGAAAGATGGTTCTGTTGTTGGTGGCTACCATAGCCATCCACCTACACCTCAAAGCACTGTTCCTTCTCCTGGGGCGGCTAGCTTGAATTCTGTTCATGAGGAATACGATGTAAATAGTCCTAGCTGGCCAAGAACACCTGCAAGTCCTAAACCTGACAGCTTGTGCAAGCTGTATGAAATGGATGATAGTCATGAACGACGTATGTGGTTGGATAAACTGCTTCAGTTCATGGAAGAACGTGGTACTCCTATTTCTGCATGCCCCACCATCTCCAAGAACCCCCTCGATCTCTTTCGCCTGTACCTGTACGTGAAGGAGAGAGGGGGCTTCATGGAGGTATGCAAGGTGACTAAGAATAAGACATGGAAGGATATTGCTGGGTTGCTTGGTATTGGAGCTTCATCAAGTGCTGCCTACACATTAAGAAAGCATTACATGAAAAATCTTCTGGCTTATGAGTGCCATTTTGATCGTGGGGGTATAGATCCACAATCGATTATTAATCAAGTGGAAGCAACATCTAAGAAAAAGGGTCCGAAGGCGGTATCTGTACCTTCTCCAGGCTCAAGTGGTGCTTCAATGGATGGGTTTTCTTATGGATACCCACCTGGCAGTACTCCCGACTTCAATACTCCTTTACAACGACCTGCCTCTCAAACTAATGCTCCTTCTCCTCATCCAGACTCAATGACACTGAATCCAAGACACTGCTTATCTACCTGCCCGCTAGGTGTAGGGGTGCCGACGCAAGGTCCGGGGGATAACATTAGCGTTTCCAACCCTTTTGATGACGTGGGTCCCCCAGGCCAGCCCCCAGGCCAGCGGCTGGGCTTGCCCAATTCGTATGGACCATCCTATGGGCCTGCGGGTGGCTCCCCTCGCCCCCAAGGTATGCACGAACAAGAGCTTGTCCTTTGCCTGTCTTATGTTTTGTTCTGTTTGGATTTTTATGGAAGTATGGTTTGA
Protein Sequence
VPLLRQETSNTDAPDVGDLTGQNSNDSTSGPGAPGTPNSQGMRPTPSPTGSTGSRSMSPAVGQQNIPMPPRPSSGQSDGSGPARMSHSPMATPGGYQQPLGPPHMHGAYKIGSHPPGIVPPTGQQMGPYTPPSQQYSQGNYVARPQGQLGNMQYGPTHGYGQQNPQGNSLSAGQYPNRPMPNHVPHSQFGGYQGWGSPGIGQGPPSNAVGTPGNQMPPKGPGPGPGPGSGPQPPSASTQGTNASTGPRSLTPPHYLKQHLQHKMYGSSGSSIPPSAGSLQVGYGGSPSVGSNSGVGVGPSPSLGPGMGSAGGIHHHGPGSMNSPMGPPASGHLHPGMGPPAPNMGPPGPSGMGPGNPGMGPPSSGTSSSTNNSGPMAVSSPSAVLQGSQGPSVSTNAASPVPNSHHDGPMPPPITSSNSNLSHPPPAGQVPSGSHPEINSVSESPHDNGIATTTTVAGTTPTNVTPATPGTVTSVVTTGPDGTPLDEGSQQSTLSNASQASGEDQNCTPKSRKDGSVVGGYHSHPPTPQSTVPSPGAASLNSVHEEYDVNSPSWPRTPASPKPDSLCKLYEMDDSHERRMWLDKLLQFMEERGTPISACPTISKNPLDLFRLYLYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYMKNLLAYECHFDRGGIDPQSIINQVEATSKKKGPKAVSVPSPGSSGASMDGFSYGYPPGSTPDFNTPLQRPASQTNAPSPHPDSMTLNPRHCLSTCPLGVGVPTQGPGDNISVSNPFDDVGPPGQPPGQRLGLPNSYGPSYGPAGGSPRPQGMHEQELVLCLSYVLFCLDFYGSMV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00872096;
90% Identity
-
80% Identity
-