Lko_31030-RA
Basic Information
- Insect
- Laupala kohalensis
- Gene Symbol
- Rel
- Assembly
- GCA_002313205.1
- Location
- NNCF01127840.1:125127-154419[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.6e-10 2.8e-06 26.9 0.2 1 42 46 88 46 90 0.87 2 3 6.8e-21 2.2e-17 63.1 1.5 62 168 89 217 86 218 0.90 3 3 0.0084 27 4.2 0.0 38 127 696 786 690 797 0.72
Sequence Information
- Coding Sequence
- ATGAATTCTGTCTCGAGCTATGAATTTTCCAATAGCTCGCAATCATCTCAAGAATCGAGGGAACCCACAATGTACAATACATTGCAGTTTCAAGGAATTCATGAATATCTTACCCCTCCAACAGGTTTTCCATGTCTGAAAGTTATTGAAGAACCTGTGGAAAAGTTCAGGTTTCGCTATAAATCTGAAATGATGGGCACTCATGGCAGTATATTAGCGAAAAGTCACgagagaaatagaagaaagaTATATCCAACTGTCAAGAAACGCACTCCCCATACTCACCGTCTAATAGTAAGAGCTGAAAATAATTCTGACAAAGATGATCCTCATGAAGTAGTTGTTTCTCAAGATAATGACTATACAGCAATaTTCCATGGGATGGGAATAATTCACACGGCAAAGAAGAACATTGTCGATGAACTCATAAAGAAAAAACGAGCCAGATTGCTTGAAAAGTTGCGTTCAAAAAACCTCAATATTATATCACTGACGACAGGTCAAGAAGCACagctACGACAGGAAGCAGAAGATGAGGCTCGAAAAATGAATCTCAATAGTGTTTCATTGCGTTTTGAAGCCTTTACACGTGACTCCAATAATTGCTTACATGAAATATGTGACGCAGTTTTCTCTAAACCCATTAATAATATGAAGAGTGCTTTGACCGGGGAATTAAAAATTTGTCGCATAGACAAGAATAGTAGCAGTTGTCTAGGTGGAGAAGAGGTTTTTATATTGGTTGAAAAAGTAGGGAAAAaaaatatcaagataaaattttttgaagttgaTGAAGATGATAACGAAATATGGAGTGATTTTGGGAAATTTACAGAGTTAGATGTGCATCACCAGTATGCAATTGTTTTCCGTACACCACCTTATAGAGACCATGACATCGATAAATCTGTTAAGGTTTTTTTACAACTGTATAGACCTACAGATGGGGACAGAAGTGAGCCCCATGAATTTACATACAAGCCGCGAGATAAAATAGGAAAATCGAGGAAGAGACAGAGAATTTATAATGATAGTCTCAACTCAGAAGATCACAGTGGGAGATTAATCAACTTGCTTAATGGATTAAGTAATAACCACATTGAAATAAGAGATGATACTGTGGTGGAGCCAATAGATGCATTCTCTAGCTTAGGAAATTTGTCAGAATTGCTTGATACCAATAATGAAATGACTTCTGGTGACTTCAAAGAATTCATGGACAACATTGATAGAGaaGTAAACCTGACCCAAACACAGAATGGATTGGGGACAGTAAActctgaatatttgaaaatgccTGTGAAATATGACCTGGACCCTGCGTGTACTGCTGCATATGTATGCAATCTTTCTGATATTACCTTTCCAGGAGGCTTGAAGACTGAAGGAATTGTTGCCcgtgATTATTTCAGTCTTCTGACACATGATGAAGTTAGTGATCTAGCTTCTGATGGAGAACGGAATGCACCTGCGAAAAGAAGAGgtcaaaaattaaatcataagcTACGAAAATTAAAAGAGATGAAAAAGAATGGTGACAGTAGTGAAGCTGTTGTTAAAAAGGAGCCAAtggtaaaTGCCCTCCATACTGCTGTGATGATAGAGCGGAAAGATGCTCTGGAACTATTTTTGCAAGTACTGGAGAAAGGATCTCatagtgaaataattaatcttcagAATTTGAGTGCTGAGACTCCTTTGCATTTAGCTGTTCTTCACAACCATCCTGAGATGGTAAAAATGTTGATACAGAGAGGTGCTAACCCAAATGTATGCAATCGTTCAGGAAATACTGCTATCCATGTAGCAGTGAGGAATTCACATAACCTCTGTTTGGTAGAGATTTTAGATAAAAAGAATTACAAGGATAATCACACTGTGGCACCAAATTGTGATGTCAAAAATGATTGTGGTGAAGCACCCTTGTACCTTGCTGCTCTCAGCCACAACTTAGAGGCTGTTAAACTGCTGGTGAAGGCTGGAGCAAGTGTCAATGAAATTGACTCCACATTTGGTCGGCATGTTCTTTTGGTAGCTGCTGAACAAGGTCATAGAGATATTATTGAATATCTCGTTAAAGAGACCAATGTTGATGTCAATTTGAGTAATTTTGCTGGGAATACAGCCTTGCATTATGCTTGTGTCATTGATGGTAGAGGATCTGCTGATATTTGCAAGTTATTGATTGATGCCAAGGCCGACCCTCATATTGTGAATTCAGAACAGCGAAGCAAGACCGCATCGATTCAAGCATCCCTTGGCATTTCTGGATGCCTAAATCCagaaataaaagaggaaataGAAAGTGAAGATGATTTTCAACTTCGCATTGATGAAGATGAGGAGGAAGAggatgaggatgatgatgatgatgacgaagatgatgatgatgatgatgatgatgatgaagaatcAAAGGGACAATCATCCATAGATTTAGCATGGAATAATAAAGAAattctTGAAATTCTAAAGAAAGCAGAAGTCACCAATTCTGTATTGtgtgaaattgatataaaaaaggAATGTCCGAGCCCTGAATCTGTGATAGATAATGGTTTGTTTGATGAAGAAGCTCTTACAAAGTTGTCTAGTATATTGGATACATCGAATGGATGGATCAATCTTGCAGATTTACTCGACTATACATTTTTGGTTCCAAGTATAAGAAGTGCGAGTTCCCCGACTAAACTTCTATTTAATTATGCAGATTTACATGGAAATGTTACTGTTCAGAACATACGCAGCTTTCTAGAAGCTTTGGATGAAACCGAGGCTGTACAAGTCATTGATCAAATGCTGGCTAGAAGAGTTTCCAGTGGTGGAACTCCTTAG
- Protein Sequence
- MNSVSSYEFSNSSQSSQESREPTMYNTLQFQGIHEYLTPPTGFPCLKVIEEPVEKFRFRYKSEMMGTHGSILAKSHERNRRKIYPTVKKRTPHTHRLIVRAENNSDKDDPHEVVVSQDNDYTAIFHGMGIIHTAKKNIVDELIKKKRARLLEKLRSKNLNIISLTTGQEAQLRQEAEDEARKMNLNSVSLRFEAFTRDSNNCLHEICDAVFSKPINNMKSALTGELKICRIDKNSSSCLGGEEVFILVEKVGKKNIKIKFFEVDEDDNEIWSDFGKFTELDVHHQYAIVFRTPPYRDHDIDKSVKVFLQLYRPTDGDRSEPHEFTYKPRDKIGKSRKRQRIYNDSLNSEDHSGRLINLLNGLSNNHIEIRDDTVVEPIDAFSSLGNLSELLDTNNEMTSGDFKEFMDNIDREVNLTQTQNGLGTVNSEYLKMPVKYDLDPACTAAYVCNLSDITFPGGLKTEGIVARDYFSLLTHDEVSDLASDGERNAPAKRRGQKLNHKLRKLKEMKKNGDSSEAVVKKEPMVNALHTAVMIERKDALELFLQVLEKGSHSEIINLQNLSAETPLHLAVLHNHPEMVKMLIQRGANPNVCNRSGNTAIHVAVRNSHNLCLVEILDKKNYKDNHTVAPNCDVKNDCGEAPLYLAALSHNLEAVKLLVKAGASVNEIDSTFGRHVLLVAAEQGHRDIIEYLVKETNVDVNLSNFAGNTALHYACVIDGRGSADICKLLIDAKADPHIVNSEQRSKTASIQASLGISGCLNPEIKEEIESEDDFQLRIDEDEEEEDEDDDDDDEDDDDDDDDDEESKGQSSIDLAWNNKEILEILKKAEVTNSVLCEIDIKKECPSPESVIDNGLFDEEALTKLSSILDTSNGWINLADLLDYTFLVPSIRSASSPTKLLFNYADLHGNVTVQNIRSFLEALDETEAVQVIDQMLARRVSSGGTP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -