Lstr034348.1
Basic Information
- Insect
- Lathronympha strigana
- Gene Symbol
- -
- Assembly
- GCA_949128165.1
- Location
- OX421921.1:7979829-7982276[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.6 6.2e+03 -1.3 0.0 22 33 229 240 226 244 0.85 2 5 9.2e-09 2.2e-05 25.8 0.1 1 45 260 306 260 307 0.95 3 5 1.3e-09 3e-06 28.5 0.3 2 44 314 360 313 362 0.94 4 5 6.3e-11 1.5e-07 32.7 0.0 1 43 366 408 366 410 0.96 5 5 1.6e-08 3.9e-05 25.0 0.0 3 46 418 463 416 463 0.96
Sequence Information
- Coding Sequence
- ATGGAGGCTATGGATGTGGATAGCGACGAAGAGCAGCAGCTAAAGGATATAGCACAATTGAATGCTGCTTTAGCAAGAGACGACGAGCCTTCTATTCTCCTAGGATCGTTAAGCGGCAGCGTAAGTTCTCGCTCGATTCTCAGTACTTCTACCAACAACGCTGTACAGGAACATGCACGAATCGACTCGGCTTTAGCGCTCAACAAACTACTGGACGAAAAACTACGAAGACTCGAAACTGTGCTTGTAGGACGATTGCATGAGTGCAGGCAGAGCTTAAATGATCTTCACAAGGTAGCAGCCCCCGCGGAGAAAGAGCGGCAAGAAACTTTCCGCTATATCAACTGTGGTAAGCCATATTTTAAAGACAAATCAAATTTTCCTGCCCCTGATAATGAAGACACTATACTTATGAAGAAAAGCAACATGTACGATTTCTCGGAAATCACTTCAGTCCCTGGCTGGACTGCAAAAGACAAAGTTAGTTTGAATAAGCTTCTCCTTGAAATGTCAGTTGATATCAAAAAGAAGGAGTTGAATTCAAAAATTGCGCAGCTGAAAAGGGAGAACAAAGATAAATGGACAAGgtcaatagaaaaaaaagtagATGCTATTAACAAAGAGATAAGTGCTTTAGGAAAAAAGACTTTAAAGGAATTAGCATTGCCAATAGACCAGGAGTATGACTGGGAAATTGTTgctaataaactaaataaaaggcACAGTGCCTCGGAATACAGAATACTTTGGAAAGAGTTCCTTCATCCTTCAATAAACAAGGATAGTTGGAAATTGGAGGAGCAAGCTCGCTTACAAGAGATAGCCACTGAGCACAACTTTCAAGACTGGGCTTCTATAGCTAAGGAGTTGAACACCGGCAGAACAGCCTATCAAGTGTTTGTTtactacagaactaatatgagcAATACATGCTCCGGTAAAAAATGGACTAAGGAAGAGGAACAGTTTCTTCAGCGATTAATTGAATATTACAAAGAAGAAGATTACATACCATGGGGCAAAGTTGCTTCATCTATGGAAAACAGAACTaagatacaaatatataataagtactTCCGACTTGTTGAAAAGAGAAAAGGCAGGTTTCTGCCAGAAGAAGATGCTGTGATACTAACCTGCATTGACAAATTTGGACATAACTTCAAGAAAATATCGGAGTATCTTCCAGGCCGTTCAGCTACTCAAACCCGTGTGCGGTACCAAGTTTTAGCTAAAAAGAGGATTTCCACTGTCTGGACAGTTCAGGAAGATAGGCAGCTGCTTCAATTGATGGCTAATGAGGAATGTCTGACAAACTACTCTAGTGTTACCAAGCACTTTCCTGATAAAACCCGTGTGCACTTAAGAGCTAGGTACATCACCTTGTTGAAATGGATGAAAAGACACCCAAATTTATCACTCGAAAACGCTCCTAGAAGAGGCGCACGGCGCCTAGGACACGGCCTTGCAACTAACAACCTCAACAAAGCCACTGAAGTACTCAAAAAGAGAATAGAAGCAGAAATTGATAatagaaaaagcaaaaaaatcacACGGGATTCACCACTTGAAGTTATTGAAGATGCTATTGTGGCAAATCTTTTAACTGAACATGTTAAACAAGAAGAGGAAAGAAAAGTGTATGAAGTGTATGATGAAGATGAATTATTTGTTCTAGATTCCAATGCTGTAGTGTCAGCATATAATCTAAATGTCACAAATCTGCAAAAACTGATGGTTTTCTTAAGAGCGAAATTGAAGCAAGACCTTTTCAAAAAAAGCTTTTATGCTGAACAGTATCCTGGCTTGCTTGATTCTCAGACAGAAGTAAATCTATTTCAGGTAAAGAGTTACTCGAGGAAAAAGCCAACCACACCATTCACAGTCGCTAATGCACCGGACATATGGGGAAATAACACACTGGGTAGTGTAACCTATGTGCTACCCCCACACTATGCTACCATAACTGGTTGCAGGAAACTCATGTTGCATGTCAACAACACAATAGCAAAACAAACCTTGAAACCCGAAATGAATATCAATCTAAACCAAATgatgagaaaaaatatattattcaaagagcaaatgtttcttttaatggAGAGATTTAATACACTGTTTTTGTATTCAATGCTTCTGTCAAATGAAGGGCCGGAAAGAGTAGGAAGGTTAGTGGCAACTGAAGATAGTCAGAAGGCCAATTCAAGTAAACCCCAACTTAGCATACTAGACAGTGTGAGCATTCCTGTCCAGCCTCCACATAGAACAAGAATTAAATCAGATCCACAGAGCACAGGCACAAATGCGAGTATAGATTTGGAGCCAGACAATGATGGGAAAGATAAGTGTTGTGTGCAGGCAGTAGTTGTTGACAATGTGGTTAGGTTTGTAAATACTGATGATCCTAAGATGAAGAAAAAAAGGAAACGGCAGTATGTGTGTTATTAA
- Protein Sequence
- MEAMDVDSDEEQQLKDIAQLNAALARDDEPSILLGSLSGSVSSRSILSTSTNNAVQEHARIDSALALNKLLDEKLRRLETVLVGRLHECRQSLNDLHKVAAPAEKERQETFRYINCGKPYFKDKSNFPAPDNEDTILMKKSNMYDFSEITSVPGWTAKDKVSLNKLLLEMSVDIKKKELNSKIAQLKRENKDKWTRSIEKKVDAINKEISALGKKTLKELALPIDQEYDWEIVANKLNKRHSASEYRILWKEFLHPSINKDSWKLEEQARLQEIATEHNFQDWASIAKELNTGRTAYQVFVYYRTNMSNTCSGKKWTKEEEQFLQRLIEYYKEEDYIPWGKVASSMENRTKIQIYNKYFRLVEKRKGRFLPEEDAVILTCIDKFGHNFKKISEYLPGRSATQTRVRYQVLAKKRISTVWTVQEDRQLLQLMANEECLTNYSSVTKHFPDKTRVHLRARYITLLKWMKRHPNLSLENAPRRGARRLGHGLATNNLNKATEVLKKRIEAEIDNRKSKKITRDSPLEVIEDAIVANLLTEHVKQEEERKVYEVYDEDELFVLDSNAVVSAYNLNVTNLQKLMVFLRAKLKQDLFKKSFYAEQYPGLLDSQTEVNLFQVKSYSRKKPTTPFTVANAPDIWGNNTLGSVTYVLPPHYATITGCRKLMLHVNNTIAKQTLKPEMNINLNQMMRKNILFKEQMFLLMERFNTLFLYSMLLSNEGPERVGRLVATEDSQKANSSKPQLSILDSVSIPVQPPHRTRIKSDPQSTGTNASIDLEPDNDGKDKCCVQAVVVDNVVRFVNTDDPKMKKKRKRQYVCY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00411398;
- 90% Identity
- -
- 80% Identity
- -