Cpom031361.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- -
- Assembly
- GCA_033807575.1
- Location
- CM066364.1:8621022-8623487[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.4 6e+03 -1.3 0.0 22 33 232 243 228 247 0.86 2 5 1e-10 2.5e-07 31.9 0.0 1 45 263 309 263 310 0.95 3 5 1.2e-09 2.9e-06 28.5 0.3 2 44 317 363 316 365 0.94 4 5 3e-11 7.4e-08 33.6 0.0 1 43 369 411 369 413 0.97 5 5 2.6e-08 6.3e-05 24.3 0.0 4 46 422 466 420 466 0.97
Sequence Information
- Coding Sequence
- ATGCAAGCTATGGATGTGGATAGTGATGAAGAACAGCAGCTATACGATATAGCGCAGCTAAATGCCGCTTTAGCACAAGACGATGAGCCTTCTATCCTCCTAGGCTCATTAAGCGGCAGCGTAAGTTCACTACGCTCTCGATCCATTCTCAGCACTTCTACTAACACCGCTGCACAGGAACATGCAAGAATCGACTCGGCATTAGCCCTTAACAAGCTTCTAGACGAAAAACTACGAAGGCTGGAATCAGTGCTCGTTGGTCGCTTACATGAATGCAGACAAAGCTTAAATGATCTACACAAGCTAGCAGTCCCTGCAGAGAAAGATCGGCAAGAAACGTTCCGCTATATAAACTGTGGCAAGCCATATTTTAAGGACAAATCAAATTTTCCAGCACCCGATAATGAAGATActataattatgaaaaaaagcAACATGTACGATTTTTCTGAGATCACTTCAGTCCCTGGCTGGACTGCAAAAGACAAAGTCAGTTTGAATAAACTCCTTCTTGAAATGTCAATTGATTTTAAAAAGAAAGAGTTGAACTCAAAGATTGCACATCTGAAACGCGAGAACAAAGATAAATGGTCAAGGAAATTAGAAAGACAAGTAGATGCAGTAAACAAAGAGATCAGTGCTTTAGGAAAAAAGACTTTAAAAGAACTAGCGTTGCCAATAGACCAGGAGTATGACTGGGACATAgttgcaaataaattaaataaaagacatAGTGCTGCAGAATACAGAATATTATGGAAAGAATTTCTGCATCCTACCATCAATAAAGACCCTTGGAAACTGGAAGAACATGCCCGCTTTCAAGAAATAGTAACCAAGTACAACTTTCAAGATTGGGCTGCAATTGCTAAAGAACTGAACACCGGCAGAACAGCCTACCAAGTCTTTGTTTACTACAGAACTAACATGAGCAATACATGTTGTGGTAAAAAATGGACTAAGGAAGAGGAACAGTTCCTTCAGCGGTTGATTGAATATTATAAAGAAGAAGATTACATACCGTGGGGCAAAGTAGCTTCATCTATGGAGAACAGGACTAAGATACAAATTTACAACAAGTATTTCCGGCTTGTTGAGAAGAGGAAAGGTAGGTTCCTGCCAGAAGAGGATGCTGTTATATTGACATGTTTTGACAAGTTTGGACCAAACTTCAAAAAAATGTCAGAGTATCTACCAGGCCGTTCAGCAACTCAGATTCGTGTTAGATACCAAGTTTTAGCTAAGAAGAGGATCTCGGCTGTCTGGACAGTTCAGGAAGATCGGCAGCTGCTTCAACTGATGGCCAATGAGGAATGTCTGACCAACTACTCCAGTGTTACCAAGCACTTCCCTGATAAAACCCGAACACATTTAAGGGCTAGATATATTACCTTATTAAAATGGATGAAAAGACATCCAAACTTGTCACTTGAAAATGCACCAAGAAGAGGTGCCCGGCGCCTTGGCCACGGACTTGCCACTGACAACCTAAACAAAGCGACTGAAGTTCTAAAGAAGAGAATAGAAACAGAAATCGATAATAGAAAAAGCAAAAGGATCACAAGGGAATCACCACAAGAAGTCATAGAAGATGCCATTATAGCTAATCTTTTAACTGAACATGTTAAACAAGAGGAGGAAAAAAAGCTACATGAAATCTATCAAGAAGATgaattatttgttttagattCTAATTCTGTAGTATCAGCAAATAATCTCAATGTGACGAATCTGCAAAAAATGATCATTTTCTTGAGAGCAAAATTGAAACAGGACCTTTTTAAAAAAAGCTCATATGCTGAACAGTACCCCGGCTTGCTAAATACGCAGCAGGAAgtaaatttatttcaagtaaagAGTTACTCAAGAAAACAATCAACAGCAGCTGTTACGTTTGCTAATGCACCAGATATATGGGGAAATAACACTTTAGGCAGCGTGACATATGTGCTCCCTCCACACTATGCAACAATAATAGGATGTAGAAAGCTCATGGCATATGTGAATTCTAAGACCATAGAAAACACATCAAAATCTGATGTGAATATCAATCTGAATCTATTGATGAGAAAAAATCTCATTTTCAAAGAGCAAATGTTTCTTTTAATGGAGAGGTTTAATTCACTGTTTCTGTATTCAATGCTTCTGTCAAATGAGGGACCGGATCGAGTAGGGAAACATGTAGTGACTGAAAATAAACAGAAGATTGATACAACAAAAGCTCAGCTTAATATACTCTCTAGTGTAAGCATTCCAGGTCCATCCAAACCTATCAGAAGCAGAGTTAAATCAGATTCACAAAGTGACACTAATATGAGTATAGACTTAGACTTGGAGCCTGAGAATAATCTGAAGGATCAATGTTGCGTTCAGAAAGTTGTTGTTGATGATGTGGTTAGGTTTATAGATGTAGACAGTTCCAAGGCAcagagaaaaagaaaaaagcagtatgtgtgctcttattaa
- Protein Sequence
- MQAMDVDSDEEQQLYDIAQLNAALAQDDEPSILLGSLSGSVSSLRSRSILSTSTNTAAQEHARIDSALALNKLLDEKLRRLESVLVGRLHECRQSLNDLHKLAVPAEKDRQETFRYINCGKPYFKDKSNFPAPDNEDTIIMKKSNMYDFSEITSVPGWTAKDKVSLNKLLLEMSIDFKKKELNSKIAHLKRENKDKWSRKLERQVDAVNKEISALGKKTLKELALPIDQEYDWDIVANKLNKRHSAAEYRILWKEFLHPTINKDPWKLEEHARFQEIVTKYNFQDWAAIAKELNTGRTAYQVFVYYRTNMSNTCCGKKWTKEEEQFLQRLIEYYKEEDYIPWGKVASSMENRTKIQIYNKYFRLVEKRKGRFLPEEDAVILTCFDKFGPNFKKMSEYLPGRSATQIRVRYQVLAKKRISAVWTVQEDRQLLQLMANEECLTNYSSVTKHFPDKTRTHLRARYITLLKWMKRHPNLSLENAPRRGARRLGHGLATDNLNKATEVLKKRIETEIDNRKSKRITRESPQEVIEDAIIANLLTEHVKQEEEKKLHEIYQEDELFVLDSNSVVSANNLNVTNLQKMIIFLRAKLKQDLFKKSSYAEQYPGLLNTQQEVNLFQVKSYSRKQSTAAVTFANAPDIWGNNTLGSVTYVLPPHYATIIGCRKLMAYVNSKTIENTSKSDVNINLNLLMRKNLIFKEQMFLLMERFNSLFLYSMLLSNEGPDRVGKHVVTENKQKIDTTKAQLNILSSVSIPGPSKPIRSRVKSDSQSDTNMSIDLDLEPENNLKDQCCVQKVVVDDVVRFIDVDSSKAQRKRKKQYVCSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00412456; iTF_01133679; iTF_00410234; iTF_00871243; iTF_00409230;
- 90% Identity
- iTF_00410234;
- 80% Identity
- -