Lstr005273.1
Basic Information
- Insect
- Lathronympha strigana
- Gene Symbol
- RELA
- Assembly
- GCA_949128165.1
- Location
- OX421902.1:21837554-21847249[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-18 8.7e-15 56.4 0.0 63 168 4 123 2 124 0.77 2 2 0.49 3.7e+03 -1.0 1.1 100 141 172 212 150 229 0.75
Sequence Information
- Coding Sequence
- ATGTACATGTTCAGAGTTCACCCTCACAGCATCACGGGATCAGATCCACGTTACACATGCCGTAACGGAGTGATCTTCGTCATCTCAGATGAGCCTGAAGTCGTCTTTAAAAACATAGGCATTCTGTGTGTCAAGGGAAAGACCGAGGTAGACGTCAAGTCGGCGCTAAAACTTCGTAGAGAGATAAACATCGATCCATTTGGAGCCGGCTTCTCGCACATAAATGATCATAGCCAAATCGACTTCACGGCGGTCCGTCTCTGCTTCCAAGTGTGCCTGCCAGGGCCGGGTTGGACCAAGGCTGATCAGCAGGATTTACTCAAATACTCCAAGAGCCTGGCTCCTATTGCCTCGGACGTGGTTTACGATGCCAAGAAACTTAATGACCTCAAGATCGTGCACGTTACCTACTGCGCTGGACCTCTAACTGGAGGGACTGAAATGACTTTGCTATGTGACAAGAAGGAACAAGCAAAAGAAATAAAAGCCATCAACCCTACGTTACTGGAAATAAAAGAGTCCAACAAAAGTATAGAAAATACTGTCAAATTCCTAGCAGCCCAAAATGAAGAACTAAGGAAGAAGGTAGAGAAGCTGGAGCAGGATAGAAAAATGGACAGGGATTACATAAATctccttgaaaataaaattgaggACCTGTCGCGCGACAGCCGAaagcaaaatttcgaaattaaaaatgtcCCGAAACTTGAGAAGGAGACTAGGGGTGACTTAGTAAGCATGGTCACTAAACTGTCAGACACCATTGGACTCCCGATATCACCCTCAGACATCTCGGATATACATAGGGTACGTAGCCGGCCGAATGATCGGAACGAAAATCAAAACGGCCCAATTATAGTCCAGATGGTATCTGCGATACAAAGGGCAGATATACTAGTGAAATGCAAAGAATATAACCAGGCAGATAATAGCAACAAATTGTGTGCTAAGCACCTTGGCTTCACAAGCAGCACCACACTAGATACCCCAATATACGTCACGGAGAATTTAACAGTTAAAGCTGCCCGACTACGATTTTTAGCACGTGATTTAGCACGCTCGAAAGATTATGCATTCTGTTGGACGTCTCTAGGAAGAGTTTATGTAAGGAAGTCTAAAGCATCACCTATAATTAACATCACAAGTGAGGCGCAGGTGCAGAGTCTTCTTAACGAATCCTGA
- Protein Sequence
- MYMFRVHPHSITGSDPRYTCRNGVIFVISDEPEVVFKNIGILCVKGKTEVDVKSALKLRREINIDPFGAGFSHINDHSQIDFTAVRLCFQVCLPGPGWTKADQQDLLKYSKSLAPIASDVVYDAKKLNDLKIVHVTYCAGPLTGGTEMTLLCDKKEQAKEIKAINPTLLEIKESNKSIENTVKFLAAQNEELRKKVEKLEQDRKMDRDYINLLENKIEDLSRDSRKQNFEIKNVPKLEKETRGDLVSMVTKLSDTIGLPISPSDISDIHRVRSRPNDRNENQNGPIIVQMVSAIQRADILVKCKEYNQADNSNKLCAKHLGFTSSTTLDTPIYVTENLTVKAARLRFLARDLARSKDYAFCWTSLGRVYVRKSKASPIINITSEAQVQSLLNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -